FFCP PHASE1:Hg19::chr14:55034599..55034610,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:55034599..55034610,+ to FFCP PHASE1:Hg19::chr14:55034599..55034610,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23034 | |EntrezGene=23034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23023 | |HGNC=23023 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000305831,ENST00000392067_5end | |||
|cluster_id=chr14:55034599..55034610,+ | |||
|description=CAGE_peak_8_at_SAMD4A_5end | |||
|id=chr14:55034599..55034610,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.27e-07;1!CL:0002625;2.27e-07;1!CL:0000228;2.27e-07;1!CL:0000216;2.27e-07;1!CL:0002372;2.27e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.42e-07,1;CL:0002625,1.42e-07,1;CL:0000216,1.42e-07,1;CL:0000228,2.21e-07,1;CL:0002372,2.21e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.51e-08;1!UBERON:0004874;2.27e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;2.27e-07;1!DOID:2513;2.27e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.25e-07,1;DOID:3112,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.89e-09!57;UBERON:0005068!1.89e-09!57;UBERON:0006241!1.89e-09!57;UBERON:0007135!1.89e-09!57;UBERON:0007023!1.98e-08!115;UBERON:0002616!1.04e-07!59;UBERON:0001017!6.10e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;5.27e-09;3!UBERON:0005290;5.27e-09;3!UBERON:0000989;2.27e-07;1!UBERON:0001136;2.27e-07;1!UBERON:0001343;2.27e-07;1!UBERON:0008811;2.27e-07;1!UBERON:0002426;2.27e-07;1!UBERON:0003831;2.27e-07;1!UBERON:0003898;2.27e-07;1!UBERON:0004830;2.27e-07;1!UBERON:0003830;2.27e-07;1!UBERON:0005175;2.27e-07;1!UBERON:0001774;2.27e-07;1!UBERON:0004910;2.27e-07;1!UBERON:0004813;2.27e-07;1!UBERON:0001103;2.27e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.47e-09,3;UBERON:0005290,6.47e-09,3;UBERON:0010096,6.47e-09,3;UBERON:0000989,1.03e-07,1;UBERON:0008811,1.03e-07,1;UBERON:0006258,1.03e-07,1;UBERON:0005876,1.03e-07,1;UBERON:0004874,1.03e-07,1;UBERON:0001136,1.42e-07,1;UBERON:0001343,1.42e-07,1;UBERON:0004910,1.42e-07,1;UBERON:0005154,1.42e-07,1;UBERON:0005295,1.42e-07,1;UBERON:0004813,1.42e-07,1;UBERON:0005297,1.42e-07,1;UBERON:0005294,1.42e-07,1;UBERON:0010141,1.42e-07,1;UBERON:0005891,1.42e-07,1;UBERON:0002426,1.51e-07,1;UBERON:0003831,1.51e-07,1;UBERON:0003898,1.51e-07,1;UBERON:0004830,1.51e-07,1;UBERON:0003830,1.51e-07,1;UBERON:0005175,1.51e-07,1;UBERON:0001774,1.51e-07,1;UBERON:0001103,1.51e-07,1;UBERON:0010084,1.51e-07,1 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0.975865597581014,0,0.408001382488506,0.313454721478088,0,0.684372125364421,0.627713197974014,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0.515151135268373,0,0.377875943688809,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,1.39624560335142,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,1.94653948121054,0.0945348171640679,0.221729397462564,0.263504357079378,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0,0.33472061276467,0,0,0,0.367663080345869,0,0.267899184852239,0.673588117878509,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0.573673241497627,0,0,0,0.49333509683432,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0.298897361103602,0.587172493218824,0.161872944368132,0.421352420106746,0.408308342509787,0.245668634623536,0.206651562351531,0,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0.538168907066586,0,0.423863802319124,0.900273288253207,0.515262646192195,0.515281080091258,0,0.168776332241266,0.292311015483596,0,0.184099797284599,0.484938170456436,0.355009592516614,0.302256294682921,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,1.56449532329816,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.301586917234893,0,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0.925971025153221,0.761016608938393,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0.621984346622316,0.144119953416961,0.88369703398466,0,0.381988425558278,1.17217447210047,0,0.411309970813294,1.20137223137567,0.285826432630578,0,0,0.07333828582095,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0.502257091432126,4.21667878966063,0.479249710983165,1.14861935834114,1.42636905040718,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,3.03329280955175,0.157702415033935,0,0,0,2.0694614258501,0,0,0.434418072340414,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0.248107807818777,0.61384789315225,1.12264037773229,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0,0,0.464841513839837,0.241718899183244,1.40354529212299,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0.340187410553031,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,1.6068392984416,0,0,0.15350367472613,0.413509717453592,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0,0.192190067365106,0.382838137483752,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.539617372749944,0,0.471249609382746,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.294747123039363,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.593929361665277,0.614321404198464,0,0.562677665642051,0.333926115068718,0.16480387422676,0,2.39097585901284,0.828851746593443,0,0.409074730008619,0.123084805461069,1.86623752597084,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,1.52581736317083,0.884634079449797,0.591095237907095,0.438770794307945,0,0,0,0.113942055847001,0,0.179515288819544,0.108647371922008,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0.843992258112108,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,1.60515529459758,0,0,0,0,0.789168805698781,0,0.30607276163049,0.252746318513952,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0,0.0730893170861856,0,0.387956065953678,0.0882561266915003,0,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,0.640358984218058,0.39961921916426,0,0.114536596165916,0,0.288109595976299,0.248505071130865,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0.837847203816763,0.458320848023367,0,0.599037001496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| ||
|short_description=p8@SAMD4A | |||
}} | }} |
Latest revision as of 07:58, 20 September 2015
Short description: | p8@SAMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SAMD4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000305831, ENST00000392067_5end |
EntrezGene: | SAMD4A |
HGNC: | 23023 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.42e-07 | 1 |
seminiferous tubule epithelial cell | 1.42e-07 | 1 |
Sertoli cell | 1.42e-07 | 1 |
multinucleate cell | 2.21e-07 | 1 |
myotube | 2.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 6.47e-09 | 3 |
myelencephalon | 6.47e-09 | 3 |
future myelencephalon | 6.47e-09 | 3 |
penis | 1.03e-07 | 1 |
intromittent organ | 1.03e-07 | 1 |
lateral plate mesenchyme | 1.03e-07 | 1 |
undifferentiated genital tubercle | 1.03e-07 | 1 |
somatopleure | 1.03e-07 | 1 |
mesothelium | 1.42e-07 | 1 |
seminiferous tubule of testis | 1.42e-07 | 1 |
epithelium of male gonad | 1.42e-07 | 1 |
epithelial cord | 1.42e-07 | 1 |
sex cord | 1.42e-07 | 1 |
seminiferous tubule epithelium | 1.42e-07 | 1 |
testis sex cord | 1.42e-07 | 1 |
genital ridge | 1.42e-07 | 1 |
primitive sex cord of indifferent gonad | 1.42e-07 | 1 |
coelomic epithelium | 1.42e-07 | 1 |
chest muscle | 1.51e-07 | 1 |
respiratory system muscle | 1.51e-07 | 1 |
skeletal muscle of trunk | 1.51e-07 | 1 |
respiratory system skeletal muscle | 1.51e-07 | 1 |
thoracic segment muscle | 1.51e-07 | 1 |
chest organ | 1.51e-07 | 1 |
muscle of trunk | 1.51e-07 | 1 |
diaphragm | 1.51e-07 | 1 |
future diaphragm | 1.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.25e-07 | 1 |
papillary adenocarcinoma | 3.62e-07 | 1 |