FFCP PHASE1:Hg19::chr14:55494051..55494069,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19392 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=52bp_to_ENST00000553735_5end | |||
|cluster_id=chr14:55494051..55494069,+ | |||
|description=CAGE_peak_5_at_SOCS4_5end | |||
|id=chr14:55494051..55494069,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.53e-11!53;CL:0000051!4.53e-11!53;CL:0000838!1.63e-10!52;CL:0002087!1.92e-09!119;CL:0000738!2.11e-09!140;CL:0000945!2.29e-08!24;CL:0000826!2.29e-08!24;CL:0000037!3.45e-08!172;CL:0000566!3.45e-08!172;CL:0002031!3.86e-08!124;CL:0000988!4.61e-08!182;CL:0002032!4.80e-07!165;CL:0000837!4.80e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.39e-21;53!CL:0000945;6.05e-16;24!CL:0000623;8.28e-16;3!CL:0001014;2.99e-11;2!CL:0001016;2.99e-11;2!CL:0000236;5.54e-10;13!CL:0000084;6.90e-09;25!CL:0000624;3.83e-08;6!CL:0000898;1.63e-07;3!CL:0002087;1.99e-07;104!CL:0000039;3.33e-07;7!CL:0000586;3.33e-07;7!CL:0000791;9.48e-07;18!CL:0000789;9.48e-07;18!CL:0002419;9.48e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.86e-33,53;CL:0000051,1.86e-33,53;CL:0000838,9.36e-31,52;CL:0000738,4.66e-21,136;CL:0002031,1.03e-18,120;CL:0002087,9.43e-18,115;CL:0000988,3.45e-16,177;CL:0000623,4.41e-16,3;CL:0000825,4.41e-16,3;CL:0000037,6.00e-16,168;CL:0000945,9.77e-16,24;CL:0000826,9.77e-16,24;CL:0002032,2.25e-15,161;CL:0000837,2.25e-15,161;CL:0001014,2.09e-11,2;CL:0001016,2.09e-11,2;CL:0000236,3.32e-09,14;CL:0000084,7.15e-09,25;CL:0000827,7.15e-09,25;CL:0000624,3.61e-08,6;CL:0000898,1.58e-07,3;CL:0000039,3.04e-07,7;CL:0000586,3.04e-07,7;CL:0000791,9.32e-07,18;CL:0000789,9.32e-07,18;CL:0002420,9.32e-07,18;CL:0002419,9.32e-07,18;CL:0000790,9.32e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.39e-21;53!CL:0000790;9.48e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0,0,0.305653622991805,0.410502947249729,0.236132343941038,0,0.383829398097213,0.619264493264304,0,0,0,1.08454080812422,1.13735385989937,0.880801318004542,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0.545812300115692,0,0,0,0,0,0.199463657621632,0,0.580418477257168,1.13477044938228,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.633765858935825,0.425208599930087,0,0.112328631146495,0.450530678524519,0,0,0.39783335439818,0,0,0.546138611262131,0.889509253863555,2.13365111283254,0.400395987036012,0,0,0,2.27685187643779,4.11066032559657,3.44045905312706,1.32171328579026,0.560508562981536,0.263384084775077,0.983548850569165,0.786021525498329,2.46721798799411,0.167186495390678,0.651844533267181,0.946895611469467,0,0.222820913770347,1.17842362989935,1.77227115666897,1.62482318259009,0,0.130059347559878,0.164437904603676,0,0,0.741432815810302,0,0,0.113309342697566,1.53288197440768,0.34362744548263,0.759059076058509,0,0,0,0,0,0,0,0,0.80642697289893,1.33720097891754,1.30341963494519,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0,2.63560834872127,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0.337552664482532,0.194874010322397,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0.609868530647977,0.530119073285941,0.464775771478074,0.414644220061482,0.504641701751257,1.45990943630332,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0,0,0.237270619111097,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,7.38994856843915,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.205654985406647,0.901029173531752,0.285826432630578,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,1.97030760201927,2.15627574859517,1.41177339907723,0.508189248444927,2.60279707715243,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.620304078368662,0.647142602455851,2.24127871387233,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0,0.182091168006717,0,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.247528499761764,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.170453254832202,0.178064071293475,0,0.192190067365106,0.765676274967505,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.640944426764839,0,0,1.11481905075431,1.298422916788,0.142283686696828,0,0.59873811429845,0.383010740264733,0.635020748171649,0,0.561594356226918,0,0,0,0.846458889008016,0.321176150207399,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.293016358543788,0.606802608747567,0,0,0,0.296964680832639,0,0.994147647766298,0,0,0.494411622680279,0.63337622438398,0,0.276283915531148,0,0.102268682502155,0.369254416383208,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0,0.520874984799877,0,0.361789315876224,0,0,0,0.658156191461918,0,0,0,0,0,0.179515288819544,0,0,0,0,1.02193298195737,0.784901281975124,0,0,0,0,0.189753732724185,0.158936578980379,0.210998064528027,0.652931232636591,0,0.432777279484182,0,0,0,0.889563386041866,0.370691816839509,1.04421949505455,0,0,0,0.364909578431332,0,0.728341138602278,0,0,0,0.126373159256976,0.60129367765797,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0,0.391969589657511,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0.164230914106418,0,0.264768380074501,0,0.548167698587004,0.19871461170299,0.1899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| |||
|short_description=p5@SOCS4 | |||
}} |
Latest revision as of 15:22, 24 September 2015
Short description: | p5@SOCS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SOCS4_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000553735_5end |
EntrezGene: | SOCS4 |
HGNC: | 19392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.86e-33 | 53 |
common lymphoid progenitor | 1.86e-33 | 53 |
lymphoid lineage restricted progenitor cell | 9.36e-31 | 52 |
leukocyte | 4.66e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 1.03e-18 | 120 |
nongranular leukocyte | 9.43e-18 | 115 |
hematopoietic cell | 3.45e-16 | 177 |
natural killer cell | 4.41e-16 | 3 |
pro-NK cell | 4.41e-16 | 3 |
hematopoietic stem cell | 6.00e-16 | 168 |
lymphocyte of B lineage | 9.77e-16 | 24 |
pro-B cell | 9.77e-16 | 24 |
hematopoietic oligopotent progenitor cell | 2.25e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-15 | 161 |
CD1a-positive Langerhans cell | 2.09e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.09e-11 | 2 |
B cell | 3.32e-09 | 14 |
T cell | 7.15e-09 | 25 |
pro-T cell | 7.15e-09 | 25 |
CD4-positive, alpha-beta T cell | 3.61e-08 | 6 |
naive T cell | 1.58e-07 | 3 |
germ line cell | 3.04e-07 | 7 |
germ cell | 3.04e-07 | 7 |
mature alpha-beta T cell | 9.32e-07 | 18 |
alpha-beta T cell | 9.32e-07 | 18 |
immature T cell | 9.32e-07 | 18 |
mature T cell | 9.32e-07 | 18 |
immature alpha-beta T cell | 9.32e-07 | 18 |