FFCP PHASE1:Hg19::chr20:19870110..19870122,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=56bp_to_ENST00000488077_5end | |||
|cluster_id=chr20:19870110..19870122,+ | |||
|description=CAGE_peak_19_at_RIN2_5end | |||
|id=chr20:19870110..19870122,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.79e-26!24;CL:0000115!7.92e-22!35;CL:0000071!1.03e-17!18;CL:0002546!1.03e-17!18;CL:0002078!3.05e-17!44;CL:0000213!2.43e-11!57;CL:0000215!2.43e-11!57;CL:1000413!4.38e-11!9;CL:0005020!1.94e-10!6;CL:0002138!1.94e-10!6;CL:0005022!1.94e-10!6;CL:0000222!1.39e-07!119;CL:0002544!3.65e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.99e-33;24!CL:0000115;1.68e-30;36!CL:0002138;2.71e-22;6!CL:0002078;6.88e-22;45!CL:0000071;2.65e-16;18!CL:1000413;3.98e-15;9!CL:0000213;4.48e-13;58!CL:0000215;4.48e-13;58!CL:0002544;4.58e-13;6!CL:0002144;3.77e-12;3!CL:0002188;1.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.36e-37,36;CL:0002139,4.67e-33,24;CL:0002078,4.17e-29,45;CL:0005020,2.06e-22,6;CL:0002138,2.06e-22,6;CL:0005022,2.06e-22,6;CL:0000213,4.33e-22,58;CL:0000215,4.33e-22,58;CL:0000071,2.88e-16,18;CL:0002546,2.88e-16,18;CL:1000413,5.15e-15,9;CL:0002544,6.24e-13,6;CL:0000222,6.72e-13,121;CL:0002144,3.01e-12,3;CL:0002188,1.15e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;2.71e-22;6!CL:0002546;2.65e-16;18 | |||
|ontology_enrichment_disease=DOID:2394!1.19e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!7.78e-27!69;UBERON:0002049!6.48e-23!79;UBERON:0007798!6.48e-23!79;UBERON:0001981!1.03e-21!60;UBERON:0007500!1.03e-21!60;UBERON:0004537!1.03e-21!60;UBERON:0006965!1.03e-21!60;UBERON:0004872!3.12e-20!84;UBERON:0001986!1.03e-17!18;UBERON:0004638!1.03e-17!18;UBERON:0004852!1.03e-17!18;UBERON:0001009!1.36e-17!113;UBERON:0000025!1.50e-16!194;UBERON:0004535!1.84e-16!110;UBERON:0004111!6.06e-16!241;UBERON:0007023!1.38e-14!115;UBERON:0000477!5.82e-14!286;UBERON:0000487!1.22e-13!22;UBERON:0003914!1.43e-12!118;UBERON:0006914!1.85e-11!25;UBERON:0001637!3.99e-11!42;UBERON:0003509!3.99e-11!42;UBERON:0004572!3.99e-11!42;UBERON:0003915!4.38e-11!9;UBERON:0004700!4.38e-11!9;UBERON:0001917!4.38e-11!9;UBERON:0000947!1.46e-10!21;UBERON:0010191!1.46e-10!21;UBERON:0000119!1.76e-08!312;UBERON:0002118!8.20e-08!5;UBERON:0004532!8.20e-08!5;UBERON:0000483!8.50e-08!309;UBERON:0001473!1.55e-07!8;UBERON:0004536!1.55e-07!8;UBERON:0006558!1.55e-07!8;UBERON:0002465!2.42e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;8.63e-17;8!UBERON:0004536;8.63e-17;8!UBERON:0006558;8.63e-17;8!UBERON:0004638;2.65e-16;18!UBERON:0001986;2.65e-16;18!UBERON:0004852;2.65e-16;18!UBERON:0003915;3.98e-15;9!UBERON:0004700;3.98e-15;9!UBERON:0001917;3.98e-15;9!UBERON:0002465;1.77e-13;10!UBERON:0000487;2.93e-13;22!UBERON:0002106;2.77e-12;3!UBERON:0010523;3.77e-12;3!UBERON:0001915;3.77e-12;3!UBERON:0001982;3.77e-12;3!UBERON:0006914;1.29e-11;25!UBERON:0002405;1.12e-10;27!UBERON:0000055;5.34e-10;65!UBERON:0002134;6.04e-10;1!UBERON:0005208;6.04e-10;1!UBERON:0004145;6.04e-10;1!UBERON:0005946;6.04e-10;1!UBERON:0005965;6.04e-10;1!UBERON:0002078;6.04e-10;1!UBERON:0000947;8.41e-10;21!UBERON:0010191;8.41e-10;21!UBERON:0000490;1.32e-08;33!UBERON:0004177;1.03e-07;5!UBERON:0005057;1.03e-07;5!UBERON:0003914;1.39e-07;74!UBERON:0007500;6.52e-07;56!UBERON:0001981;6.52e-07;56!UBERON:0004537;6.52e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.12e-21,68;UBERON:0002049,1.38e-18,78;UBERON:0007798,1.38e-18,78;UBERON:0001473,7.03e-17,8;UBERON:0004536,7.03e-17,8;UBERON:0006558,7.03e-17,8;UBERON:0004638,2.88e-16,18;UBERON:0001986,2.88e-16,18;UBERON:0004852,2.88e-16,18;UBERON:0003915,5.15e-15,9;UBERON:0004700,5.15e-15,9;UBERON:0001917,5.15e-15,9;UBERON:0002465,1.50e-13,10;UBERON:0000487,3.13e-13,22;UBERON:0007500,1.09e-12,59;UBERON:0001981,1.09e-12,59;UBERON:0004537,1.09e-12,59;UBERON:0006965,1.09e-12,59;UBERON:0004535,1.33e-12,109;UBERON:0004872,1.59e-12,83;UBERON:0010523,3.01e-12,3;UBERON:0001915,3.01e-12,3;UBERON:0001982,3.01e-12,3;UBERON:0001009,3.36e-12,112;UBERON:0002106,3.99e-12,3;UBERON:0004854,3.99e-12,3;UBERON:0009034,3.99e-12,3;UBERON:0002095,3.99e-12,3;UBERON:0004782,3.99e-12,3;UBERON:0003281,3.99e-12,3;UBERON:0009664,3.99e-12,3;UBERON:0002296,3.99e-12,3;UBERON:0005602,3.99e-12,3;UBERON:0001179,3.99e-12,3;UBERON:0006293,3.99e-12,3;UBERON:0006914,1.37e-11,25;UBERON:0003887,2.09e-11,12;UBERON:0002134,4.46e-10,1;UBERON:0005208,4.46e-10,1;UBERON:0005946,4.46e-10,1;UBERON:0005965,4.46e-10,1;UBERON:0002078,4.46e-10,1;UBERON:0000947,9.70e-10,21;UBERON:0010191,9.70e-10,21;UBERON:0003914,2.65e-08,117;UBERON:0004111,4.70e-07,240;UBERON:0003886,8.73e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,2.41077811209591,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,1.19257444420023,0,1.04142150482278,0.56530794192401,0.419499436209906,2.47606237746061,0.417989933073621,2.84258435086262,1.77883131343355,1.33888245105868,0.805658634218294,1.52054421143703,2.68468263302986,0.367663080345869,2.43042584364528,0.625098097988558,0.673588117878509,0.112611480483322,0,0,0.732806975721629,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,1.15493158208859,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.51336800074665,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,1.87103075804167,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,2.31694369112849,0.313932918407225,0,0,0.970722711091971,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0.248505071130865,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0.458320848023367,2.87149209830726,0.199679000498991,0,0.446342914883745,0.134366944973453,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.747511887973863,1.88645166119599,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0.443565449968902,1.11507737014592,0,0.931577741257556,0,0.265841714557995,0.521745061811734,0,0,0.813741466409323,0.363697318405119,0.107410557042488,0.464033759878494,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0.0679697329768317,0.131545547125698,0,0.667388411352415,0,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.588925401344836,0,0.4226557275834,0,1.03382309777839,4.83434159801829,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0,0,1.61693751166575,0,0,0.0673520530145875,0.286888821570705,0.332660356546013,0,0,0,0.179650404213174,0,0.366724332548599,0,0,0.603821380773079,0 | |||
|short_description=p19@RIN2 | |||
}} |
Latest revision as of 16:09, 24 September 2015
Short description: | p19@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENST00000488077_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.36e-37 | 36 |
endothelial cell of vascular tree | 4.67e-33 | 24 |
meso-epithelial cell | 4.17e-29 | 45 |
lymphangioblast | 2.06e-22 | 6 |
endothelial cell of lymphatic vessel | 2.06e-22 | 6 |
vascular lymphangioblast | 2.06e-22 | 6 |
lining cell | 4.33e-22 | 58 |
barrier cell | 4.33e-22 | 58 |
blood vessel endothelial cell | 2.88e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.88e-16 | 18 |
endothelial cell of artery | 5.15e-15 | 9 |
aortic endothelial cell | 6.24e-13 | 6 |
mesodermal cell | 6.72e-13 | 121 |
capillary endothelial cell | 3.01e-12 | 3 |
glomerular endothelial cell | 1.15e-07 | 5 |