FFCP PHASE1:Hg19::chr12:71709560..71709572,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7103 | |EntrezGene=7103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |HGNC=11855 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000549421_5end | |association_with_transcript=-24bp_to_ENST00000549421_5end | ||
|cluster_id=chr12:71709560..71709572,- | |||
|description=CAGE_peak_13_at_TSPAN8_5end | |description=CAGE_peak_13_at_TSPAN8_5end | ||
|id=chr12:71709560..71709572,- | |id=chr12:71709560..71709572,- | ||
|ontology_enrichment_celltype=CL:0002623!1.08e-19!3;CL:0000622!4.99e-12!5;CL:0000154!4.21e-10!6;CL:0000150!7.10e-07!9 | |ontology_enrichment_celltype=CL:0002623!1.08e-19!3;CL:0000622!4.99e-12!5;CL:0000154!4.21e-10!6;CL:0000150!7.10e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002623;4.58e-25;3!CL:0000622;1.81e-15;5!CL:0000154;4.66e-13;6!CL:0000150;5.10e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.87e-25,3;CL:0000622,1.88e-15,5;CL:0000154,4.81e-13,6;CL:0000150,5.20e-09,9;CL:0000066,6.20e-08,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.85e-39;29!UBERON:0006595;6.01e-07;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.23e-13,106;DOID:0050687,1.23e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.51e-56!9;UBERON:0001557!2.19e-31!19;UBERON:0001004!3.00e-21!72;UBERON:0008947!3.03e-21!38;UBERON:0003258!3.03e-21!38;UBERON:0000065!6.66e-20!53;UBERON:0000072!3.89e-17!46;UBERON:0001041!1.25e-16!98;UBERON:0000077!3.69e-13!130;UBERON:0004921!3.69e-13!129;UBERON:0004185!3.69e-13!129;UBERON:0003127!9.55e-13!2;UBERON:0001007!1.32e-11!155;UBERON:0001555!1.32e-11!155;UBERON:0007026!1.32e-11!155;UBERON:0004119!1.48e-11!169;UBERON:0000925!1.48e-11!169;UBERON:0006595!1.48e-11!169;UBERON:0001044!4.21e-10!6;UBERON:0003293!4.21e-10!6;UBERON:0003294!4.21e-10!6;UBERON:0010047!4.21e-10!6;UBERON:0000167!4.21e-10!6;UBERON:0002372!3.84e-07!1;UBERON:0001961!3.84e-07!1;UBERON:0001744!3.84e-07!1;UBERON:0001735!3.84e-07!1;UBERON:0003104!4.65e-07!238;UBERON:0009142!4.65e-07!238;UBERON:0000063!6.33e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.06e-126;9!UBERON:0001557;5.06e-126;9!UBERON:0000072;3.44e-28;37!UBERON:0000065;3.55e-23;44!UBERON:0001004;3.91e-18;65!UBERON:0001044;4.66e-13;6!UBERON:0003293;4.66e-13;6!UBERON:0003294;4.66e-13;6!UBERON:0010047;4.66e-13;6!UBERON:0003408;4.66e-13;6!UBERON:0000167;4.66e-13;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.07e-126,9;UBERON:0001557,1.13e-59,19;UBERON:0008947,9.75e-30,38;UBERON:0003258,9.75e-30,38;UBERON:0000072,5.49e-24,47;UBERON:0001004,1.17e-23,74;UBERON:0000065,7.80e-21,54;UBERON:0001041,4.79e-20,87;UBERON:0004921,1.69e-14,118;UBERON:0001044,4.81e-13,6;UBERON:0003293,4.81e-13,6;UBERON:0003294,4.81e-13,6;UBERON:0010047,4.81e-13,6;UBERON:0000167,4.81e-13,6;UBERON:0001007,1.07e-11,145;UBERON:0001555,1.07e-11,145;UBERON:0007026,1.07e-11,145;UBERON:0004119,1.53e-10,160;UBERON:0000925,1.53e-10,160;UBERON:0006595,1.53e-10,160;UBERON:0003408,3.37e-08,10;UBERON:0011216,2.99e-07,223 | |||
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|short_description=p13@TSPAN8 | |short_description=p13@TSPAN8 | ||
}} | }} |
Latest revision as of 16:52, 24 September 2015
Short description: | p13@TSPAN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TSPAN8_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000549421_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.87e-25 | 3 |
acinar cell | 1.88e-15 | 5 |
protein secreting cell | 4.81e-13 | 6 |
glandular epithelial cell | 5.20e-09 | 9 |
epithelial cell | 6.20e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.07e-126 | 9 |
upper respiratory tract | 1.13e-59 | 19 |
respiratory primordium | 9.75e-30 | 38 |
endoderm of foregut | 9.75e-30 | 38 |
segment of respiratory tract | 5.49e-24 | 47 |
respiratory system | 1.17e-23 | 74 |
respiratory tract | 7.80e-21 | 54 |
foregut | 4.79e-20 | 87 |
subdivision of digestive tract | 1.69e-14 | 118 |
saliva-secreting gland | 4.81e-13 | 6 |
gland of oral region | 4.81e-13 | 6 |
gland of foregut | 4.81e-13 | 6 |
oral gland | 4.81e-13 | 6 |
oral cavity | 4.81e-13 | 6 |
digestive system | 1.07e-11 | 145 |
digestive tract | 1.07e-11 | 145 |
primitive gut | 1.07e-11 | 145 |
endoderm-derived structure | 1.53e-10 | 160 |
endoderm | 1.53e-10 | 160 |
presumptive endoderm | 1.53e-10 | 160 |
gland of gut | 3.37e-08 | 10 |
organ system subdivision | 2.99e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.23e-13 | 106 |
cell type cancer | 1.23e-09 | 143 |