FFCP PHASE1:Hg19::chr6:130031479..130031493,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93663 | |EntrezGene=93663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21035 | |HGNC=21035 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N392 | |UniProt=Q8N392 | ||
|association_with_transcript=-109bp_to_ENST00000275189,NM_033515,uc003qbr.2,uc011ebw.1_5end | |association_with_transcript=-109bp_to_ENST00000275189,NM_033515,uc003qbr.2,uc011ebw.1_5end | ||
|cluster_id=chr6:130031479..130031493,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_ARHGAP18_5end | |description=CAGE_peak_3_at_ARHGAP18_5end | ||
|id=chr6:130031479..130031493,- | |id=chr6:130031479..130031493,- | ||
|ontology_enrichment_celltype=CL:0002274!1.65e-09!5;CL:0000457!1.65e-09!5;CL:0002191!1.65e-09!5;CL:0000097!1.65e-09!5;CL:0000831!1.65e-09!5;CL:0002028!1.65e-09!5;CL:0002139!4.68e-08!24;CL:0000163!6.46e-07!9;CL:0000071!6.94e-07!18;CL:0002546!6.94e-07!18 | |ontology_enrichment_celltype=CL:0002274!1.65e-09!5;CL:0000457!1.65e-09!5;CL:0002191!1.65e-09!5;CL:0000097!1.65e-09!5;CL:0000831!1.65e-09!5;CL:0002028!1.65e-09!5;CL:0002139!4.68e-08!24;CL:0000163!6.46e-07!9;CL:0000071!6.94e-07!18;CL:0002546!6.94e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.23e-71;5!CL:0000163;7.10e-57;9!CL:0002174;1.92e-15;1!CL:0002591;1.92e-15;1!CL:0000501;1.92e-15;1!CL:0000151;4.47e-13;36!CL:0000047;2.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.44e-72,5;CL:0002028,6.44e-72,5;CL:0000163,4.40e-57,9;CL:0002174,1.78e-15,1;CL:0000501,1.78e-15,1;CL:0002591,2.75e-15,1;CL:0000151,3.61e-14,36;CL:0000763,1.08e-07,108;CL:0000049,1.08e-07,108;CL:0000839,1.90e-07,66;CL:0000557,2.47e-07,67;CL:0000766,8.31e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.94e-07!18;UBERON:0004638!6.94e-07!18;UBERON:0004852!6.94e-07!18 | |ontology_enrichment_uberon=UBERON:0001986!6.94e-07!18;UBERON:0004638!6.94e-07!18;UBERON:0004852!6.94e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.23e-08;2!UBERON:0002012;2.23e-08;2!UBERON:0008886;2.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.67e-08,2;UBERON:0007497,2.67e-08,2;UBERON:0003643,2.67e-08,2;UBERON:0003504,2.67e-08,2;UBERON:0003469,2.67e-08,2;UBERON:0003496,2.67e-08,2;UBERON:0002012,2.67e-08,2;UBERON:0008886,2.67e-08,2;UBERON:0007303,2.67e-08,2;UBERON:0002061,2.67e-08,2;UBERON:0005432,2.67e-08,2;UBERON:0004363,2.67e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.0447784237956,0.531831842075461,0,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0.81014194788176,0.714397826272638,0,0.225222960966644,0,0.949265659568129,0.916008719652036,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0,0.23486899728753,0.647491777472526,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,11.8239177095026,3.78608266256872,2.90259361757081,2.01767934783746,1.64115163454294,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.537182889719687,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.771048469013278,0,0.164254312027618,0,0,0.241718899183244,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,1.23087398947712,0.811367035427949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0,0,0,0,0,0,1.41282230755522,0.166211681900156,0,0.19606253431774,0,0,0.158936578980379,0,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0.951329442515298,0.313808538937,0.101998217636322,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0.0671834724867263,0,0,1.10296455230113,0.988990300573997,1.3480708770837,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0.226624183040251,0,0,0,0,0.171086837884329,0,0.427149650270779,0.628817220398664,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0.560544326627578,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.485168122375632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.0447784237956,0.531831842075461,0,0,0,0.39752481473341,0,0.347140501607594,1.13061588384802,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0.81014194788176,0.714397826272638,0,0.225222960966644,0,0.949265659568129,0.916008719652036,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0,0.23486899728753,0.647491777472526,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,11.8239177095026,3.78608266256872,2.90259361757081,2.01767934783746,1.64115163454294,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.537182889719687,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.771048469013278,0,0.164254312027618,0,0,0.241718899183244,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,1.23087398947712,0.811367035427949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0,0,0,0,0,0,1.41282230755522,0.166211681900156,0,0.19606253431774,0,0,0.158936578980379,0,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0.951329442515298,0.313808538937,0.101998217636322,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0.0671834724867263,0,0,1.10296455230113,0.988990300573997,1.3480708770837,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0.226624183040251,0,0,0,0,0.171086837884329,0,0.427149650270779,0.628817220398664,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0.560544326627578,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ARHGAP18 | |short_description=p3@ARHGAP18 | ||
}} | }} |
Latest revision as of 17:02, 24 September 2015
Short description: | p3@ARHGAP18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGAP18_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -109bp_to_ENST00000275189, NM_033515, uc003qbr.2, uc011ebw.1_5end |
EntrezGene: | ARHGAP18 |
HGNC: | 21035 |
UniProt: | Q8N392 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.44e-72 | 5 |
basophil mast progenitor cell | 6.44e-72 | 5 |
endocrine cell | 4.40e-57 | 9 |
follicular cell of ovary | 1.78e-15 | 1 |
granulosa cell | 1.78e-15 | 1 |
smooth muscle cell of the pulmonary artery | 2.75e-15 | 1 |
secretory cell | 3.61e-14 | 36 |
myeloid cell | 1.08e-07 | 108 |
common myeloid progenitor | 1.08e-07 | 108 |
myeloid lineage restricted progenitor cell | 1.90e-07 | 66 |
granulocyte monocyte progenitor cell | 2.47e-07 | 67 |
myeloid leukocyte | 8.31e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.67e-08 | 2 |
developing epithelial placode | 2.67e-08 | 2 |
respiratory system arterial blood vessel | 2.67e-08 | 2 |
respiratory system blood vessel | 2.67e-08 | 2 |
respiratory system artery | 2.67e-08 | 2 |
head blood vessel | 2.67e-08 | 2 |
pulmonary artery | 2.67e-08 | 2 |
pulmonary vascular system | 2.67e-08 | 2 |
pharyngeal vasculature | 2.67e-08 | 2 |
truncus arteriosus | 2.67e-08 | 2 |
aortic sac | 2.67e-08 | 2 |
pharyngeal arch artery | 2.67e-08 | 2 |