FFCP PHASE1:Hg19::chr11:102323410..102323435,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:102323410..102323435,- to FFCP PHASE1:Hg19::chr11:102323410..102323435,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=114908 | |EntrezGene=114908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30138 | |HGNC=30138 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-127bp_to_ENST00000529492_5end | |||
|cluster_id=chr11:102323410..102323435,- | |||
|description=CAGE_peak_3_at_TMEM123_5end | |||
|id=chr11:102323410..102323435,- | |||
|ontology_enrichment_celltype=CL:0000037!2.87e-34!172;CL:0000566!2.87e-34!172;CL:0002032!5.60e-33!165;CL:0000837!5.60e-33!165;CL:0000988!2.48e-32!182;CL:0000738!7.03e-32!140;CL:0002087!4.52e-28!119;CL:0000763!9.69e-27!112;CL:0000049!9.69e-27!112;CL:0002031!1.37e-25!124;CL:0000766!5.17e-25!76;CL:0002009!2.83e-23!65;CL:0002194!8.13e-23!63;CL:0000576!8.13e-23!63;CL:0000040!8.13e-23!63;CL:0000559!8.13e-23!63;CL:0000557!1.64e-22!71;CL:0000839!1.60e-19!70;CL:0002057!9.74e-18!42;CL:0000860!2.13e-15!45;CL:0000945!4.25e-07!24;CL:0000826!4.25e-07!24;CL:0000134!4.27e-07!358;CL:0000838!9.38e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-16;33!CL:0002057;1.14e-16;33!CL:0000473;5.15e-16;39!CL:0000234;5.15e-16;39!CL:0000576;3.60e-13;48!CL:0000766;1.09e-10;69!CL:0000763;1.77e-09;100!CL:0000738;6.41e-08;136!CL:0002087;7.12e-08;104!CL:0000988;2.19e-07;177!CL:0000945;4.90e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.67e-35,168;CL:0002032,5.11e-34,161;CL:0000837,5.11e-34,161;CL:0000988,5.15e-34,177;CL:0000738,4.61e-33,136;CL:0002087,2.62e-29,115;CL:0000763,5.42e-28,108;CL:0000049,5.42e-28,108;CL:0000766,1.04e-26,72;CL:0002031,1.05e-26,120;CL:0002009,4.06e-25,61;CL:0002194,1.11e-24,59;CL:0000576,1.11e-24,59;CL:0000040,1.11e-24,59;CL:0000559,1.11e-24,59;CL:0000557,3.71e-24,67;CL:0000839,5.21e-21,66;CL:0000473,3.13e-20,48;CL:0000234,3.13e-20,48;CL:0000860,9.65e-18,42;CL:0002057,9.65e-18,42;CL:0000134,9.84e-08,354;CL:0000945,4.23e-07,24;CL:0000826,4.23e-07,24;CL:0000838,9.35e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-13;42!CL:0000049;6.56e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.58e-23!102;UBERON:0003061!2.58e-23!102;UBERON:0002193!2.59e-23!112;UBERON:0002405!1.42e-20!115;UBERON:0002371!4.63e-19!80;UBERON:0001474!1.51e-18!86;UBERON:0004765!1.05e-14!101;UBERON:0001434!1.05e-14!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.64e-24,98;UBERON:0003061,1.64e-24,98;UBERON:0002193,2.28e-24,108;UBERON:0002405,3.67e-21,93;UBERON:0002371,2.59e-20,76;UBERON:0001474,1.02e-19,82;UBERON:0004765,1.66e-15,90;UBERON:0001434,6.26e-14,100;UBERON:0003081,1.11e-08,203 | |||
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| ||
|short_description=p3@TMEM123 | |||
}} | }} |
Latest revision as of 17:34, 24 September 2015
Short description: | p3@TMEM123 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM123_5end |
Coexpression cluster: | NA |
Association with transcript: | -127bp_to_ENST00000529492_5end |
EntrezGene: | TMEM123 |
HGNC: | 30138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.67e-35 | 168 |
hematopoietic oligopotent progenitor cell | 5.11e-34 | 161 |
hematopoietic multipotent progenitor cell | 5.11e-34 | 161 |
hematopoietic cell | 5.15e-34 | 177 |
leukocyte | 4.61e-33 | 136 |
nongranular leukocyte | 2.62e-29 | 115 |
myeloid cell | 5.42e-28 | 108 |
common myeloid progenitor | 5.42e-28 | 108 |
myeloid leukocyte | 1.04e-26 | 72 |
hematopoietic lineage restricted progenitor cell | 1.05e-26 | 120 |
macrophage dendritic cell progenitor | 4.06e-25 | 61 |
monopoietic cell | 1.11e-24 | 59 |
monocyte | 1.11e-24 | 59 |
monoblast | 1.11e-24 | 59 |
promonocyte | 1.11e-24 | 59 |
granulocyte monocyte progenitor cell | 3.71e-24 | 67 |
myeloid lineage restricted progenitor cell | 5.21e-21 | 66 |
defensive cell | 3.13e-20 | 48 |
phagocyte | 3.13e-20 | 48 |
classical monocyte | 9.65e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.65e-18 | 42 |
mesenchymal cell | 9.84e-08 | 354 |
lymphocyte of B lineage | 4.23e-07 | 24 |
pro-B cell | 4.23e-07 | 24 |
lymphoid lineage restricted progenitor cell | 9.35e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.64e-24 | 98 |
blood island | 1.64e-24 | 98 |
hemolymphoid system | 2.28e-24 | 108 |
immune system | 3.67e-21 | 93 |
bone marrow | 2.59e-20 | 76 |
bone element | 1.02e-19 | 82 |
skeletal element | 1.66e-15 | 90 |
skeletal system | 6.26e-14 | 100 |
lateral plate mesoderm | 1.11e-08 | 203 |