FFCP PHASE1:Hg19::chr9:119161224..119161240,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:119161224..119161240,+
|short_description=p17@PAPPA
|description=CAGE_peak_17_at_PAPPA_5end
|association_with_transcript=-121bp_to_AJ420467_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-121bp_to_AJ420467_5end | |||
|cluster_id=chr9:119161224..119161240,+ | |||
|coexpression_cluster_id=C776 | |||
|description=CAGE_peak_17_at_PAPPA_5end | |||
|id=chr9:119161224..119161240,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.76e-19!180;CL:0000359!2.20e-18!32;CL:0000192!6.12e-16!42;CL:0000514!6.12e-16!42;CL:0000057!2.70e-15!75;CL:0000187!1.70e-14!54;CL:0000680!3.23e-14!57;CL:0000056!3.23e-14!57;CL:0000355!3.23e-14!57;CL:0000183!1.76e-12!59;CL:0002334!3.80e-12!12;CL:0000393!4.02e-12!60;CL:0000211!4.02e-12!60;CL:0000048!5.30e-09!430;CL:0000723!7.12e-09!436;CL:0000034!3.07e-08!444;CL:0002539!2.65e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002539;1.17e-27;10!CL:0000359;5.39e-26;32!CL:0002541;2.25e-24;3!CL:0000192;4.26e-14;43!CL:0002580;2.85e-11;3!CL:0000187;2.42e-07;55!CL:0002595;5.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,1.07e-27,10;CL:0000359,4.32e-27,32;CL:0002541,1.93e-24,3;CL:0000192,1.08e-19,43;CL:0000514,1.08e-19,43;CL:0000187,5.39e-15,55;CL:0000680,4.01e-14,58;CL:0000056,4.01e-14,58;CL:0000355,4.01e-14,58;CL:0000393,2.45e-13,61;CL:0000211,2.45e-13,61;CL:0002580,2.15e-11,3;CL:0002595,6.76e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;4.26e-14;43!UBERON:0003124;1.74e-09;1!CL:0000355;3.21e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!7.41e-14!42;UBERON:0003509!7.41e-14!42;UBERON:0004572!7.41e-14!42;UBERON:0004573!4.32e-13!33;UBERON:0004571!4.32e-13!33;UBERON:0001134!1.16e-12!61;UBERON:0002036!1.16e-12!61;UBERON:0003082!1.16e-12!61;UBERON:0002385!5.79e-12!63;UBERON:0001015!5.79e-12!63;UBERON:0000383!5.79e-12!63;UBERON:0000914!2.72e-11!83;UBERON:0002329!2.72e-11!83;UBERON:0003077!2.72e-11!83;UBERON:0003059!2.72e-11!83;UBERON:0007282!2.72e-11!83;UBERON:0009618!2.72e-11!83;UBERON:0007285!2.72e-11!83;UBERON:0004290!7.24e-10!70;UBERON:0002049!3.28e-09!79;UBERON:0007798!3.28e-09!79;UBERON:0004872!4.65e-09!84;UBERON:0001981!3.60e-08!60;UBERON:0007500!3.60e-08!60;UBERON:0004537!3.60e-08!60;UBERON:0006965!3.60e-08!60;UBERON:0004535!4.04e-08!110;UBERON:0000486!7.12e-08!82;UBERON:0001009!1.23e-07!113;UBERON:0004237!2.65e-07!10;UBERON:0004695!2.65e-07!10;UBERON:0002111!2.65e-07!10;UBERON:0004178!2.65e-07!10;UBERON:0002100!3.50e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.17e-27;10!UBERON:0004695;1.17e-27;10!UBERON:0002111;1.17e-27;10!UBERON:0004178;1.17e-27;10!UBERON:0004573;1.20e-25;33!UBERON:0004571;1.20e-25;33!UBERON:0003124;2.25e-24;3!UBERON:0000920;2.25e-24;3!UBERON:0001135;2.66e-18;15!UBERON:0000947;2.30e-17;21!UBERON:0010191;2.30e-17;21!UBERON:0001637;7.25e-16;42!UBERON:0003509;7.25e-16;42!UBERON:0004572;7.25e-16;42!UBERON:0007500;2.50e-09;56!UBERON:0001981;2.50e-09;56!UBERON:0004537;2.50e-09;56!UBERON:0002385;1.18e-08;31!UBERON:0001015;1.18e-08;31!UBERON:0000383;1.18e-08;31!UBERON:0005631;1.12e-07;10!UBERON:0000158;1.12e-07;10!UBERON:0003834;5.81e-07;5!UBERON:0001533;5.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.07e-27,10;UBERON:0004695,1.07e-27,10;UBERON:0002111,1.07e-27,10;UBERON:0004178,1.07e-27,10;UBERON:0004573,3.09e-26,33;UBERON:0004571,3.09e-26,33;UBERON:0000920,1.93e-24,3;UBERON:0001637,3.66e-24,42;UBERON:0003509,3.66e-24,42;UBERON:0004572,3.66e-24,42;UBERON:0003124,1.73e-18,7;UBERON:0001135,2.51e-18,15;UBERON:0000947,1.89e-17,21;UBERON:0010191,1.89e-17,21;UBERON:0007500,1.33e-16,59;UBERON:0001981,1.33e-16,59;UBERON:0004537,1.33e-16,59;UBERON:0006965,1.33e-16,59;UBERON:0004872,1.46e-15,83;UBERON:0000055,3.97e-14,68;UBERON:0001134,4.30e-13,62;UBERON:0002036,4.30e-13,62;UBERON:0003082,4.30e-13,62;UBERON:0002385,1.26e-12,64;UBERON:0001015,1.26e-12,64;UBERON:0000383,1.26e-12,64;UBERON:0002049,4.77e-12,78;UBERON:0007798,4.77e-12,78;UBERON:0002329,3.37e-11,71;UBERON:0003059,3.37e-11,71;UBERON:0007282,3.37e-11,71;UBERON:0004290,3.37e-11,71;UBERON:0009618,3.37e-11,71;UBERON:0003077,5.12e-11,72;UBERON:0007285,5.12e-11,72;UBERON:0007524,7.69e-11,73;UBERON:0003914,3.27e-10,117;UBERON:0007503,5.00e-10,78;UBERON:0004535,1.62e-09,109;UBERON:0005631,2.52e-09,14;UBERON:0000158,2.52e-09,14;UBERON:0000486,2.60e-09,83;UBERON:0001009,3.36e-09,112;UBERON:0005256,6.46e-07,122;UBERON:0003834,6.76e-07,5;UBERON:0001533,6.76e-07,5 | |||
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| ||
|short_description=p17@PAPPA | |||
}} | }} |
Latest revision as of 18:13, 24 September 2015
Short description: | p17@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PAPPA_5end |
Coexpression cluster: | C776_chorionic_placenta_Smooth_Aortic_Fibroblast_leiomyoma_mesothelioma |
Association with transcript: | -121bp_to_AJ420467_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 1.07e-27 | 10 |
vascular associated smooth muscle cell | 4.32e-27 | 32 |
chorionic membrane mesenchymal stem cell | 1.93e-24 | 3 |
smooth muscle cell | 1.08e-19 | 43 |
smooth muscle myoblast | 1.08e-19 | 43 |
muscle cell | 5.39e-15 | 55 |
muscle precursor cell | 4.01e-14 | 58 |
myoblast | 4.01e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.01e-14 | 58 |
electrically responsive cell | 2.45e-13 | 61 |
electrically active cell | 2.45e-13 | 61 |
preadipocyte of the breast | 2.15e-11 | 3 |
smooth muscle cell of the subclavian artery | 6.76e-07 | 5 |