FFCP PHASE1:Hg19::chr2:220117988..220118034,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:220117988..220118034,-
|short_description=p2@TUBA4A
|description=CAGE_peak_2_at_TUBA4A_5end
|association_with_transcript=41bp_to_ENST00000447205_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7277 | |EntrezGene=7277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12407 | |HGNC=12407 | ||
|TSSclassifier=strong | |||
|UniProt=C9JEV8 | |UniProt=C9JEV8 | ||
|association_with_transcript=41bp_to_ENST00000447205_5end | |||
|cluster_id=chr2:220117988..220118034,- | |||
|description=CAGE_peak_2_at_TUBA4A_5end | |||
|id=chr2:220117988..220118034,- | |||
|ontology_enrichment_celltype=CL:0000066!1.64e-15!254;CL:0000012!9.68e-12!682;CL:0000548!2.37e-11!679;CL:0000004!2.37e-11!679;CL:0000255!2.37e-11!679;CL:0000220!3.04e-10!246;CL:0002321!3.26e-10!248;CL:0000003!9.04e-10!722;CL:0002076!1.71e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.83e-08;13!CL:0002159;8.94e-08;14!CL:0002076;3.84e-07;42!CL:1000507;5.80e-07;10!CL:1000494;5.80e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.62e-15,253;CL:0002321,6.79e-10,250;CL:0002076,6.58e-09,42;CL:0002368,2.79e-08,13;CL:0002159,1.10e-07,14;CL:1000507,6.04e-07,10;CL:1000494,6.04e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!5.02e-11!82;UBERON:0005256!4.51e-10!143;UBERON:0003104!1.42e-09!238;UBERON:0009142!1.42e-09!238;UBERON:0000914!4.03e-09!83;UBERON:0002329!4.03e-09!83;UBERON:0003077!4.03e-09!83;UBERON:0003059!4.03e-09!83;UBERON:0007282!4.03e-09!83;UBERON:0009618!4.03e-09!83;UBERON:0007285!4.03e-09!83;UBERON:0008947!2.53e-08!38;UBERON:0003258!2.53e-08!38;UBERON:0001004!3.72e-08!72;UBERON:0000065!4.91e-08!53;UBERON:0004119!1.49e-07!169;UBERON:0000925!1.49e-07!169;UBERON:0006595!1.49e-07!169;UBERON:0004290!2.49e-07!70;UBERON:0002100!2.53e-07!216;UBERON:0000072!2.56e-07!46;UBERON:0000481!4.64e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.45e-08;37!UBERON:0000065;1.05e-07;44!UBERON:0001737;2.45e-07;9!UBERON:0001557;2.45e-07;9!UBERON:0004211;5.80e-07;10!UBERON:0009773;5.80e-07;10!UBERON:0001231;5.80e-07;10!UBERON:0004810;5.80e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.89e-10,83;UBERON:0008947,3.22e-08,38;UBERON:0003258,3.22e-08,38;UBERON:0007503,1.06e-07,78;UBERON:0001004,1.82e-07,74;UBERON:0004119,1.87e-07,160;UBERON:0000925,1.87e-07,160;UBERON:0006595,1.87e-07,160;UBERON:0001737,2.34e-07,9;UBERON:0000065,2.58e-07,54;UBERON:0004810,6.04e-07,10;UBERON:0002329,8.50e-07,71;UBERON:0003059,8.50e-07,71;UBERON:0007282,8.50e-07,71;UBERON:0004290,8.50e-07,71;UBERON:0009618,8.50e-07,71;UBERON:0000072,9.53e-07,47;UBERON:0005256,9.72e-07,122 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,1.74467704820074,0,2.52687949370732,0.261185628199839,8.84642171405432,27.2142455509247,2.40285509343189,0.791300934685361,7.4259811776028,10.6047160232933,2.6893005858071,1.80808358407193,5.11217063271161,1.95173119516203,0.492484232307152,0.204000691244253,0,0,0.684372125364421,0.125542639594803,0.0764134057479513,0.0821005894499457,0,3.14691421479123,0.767658796194425,0.928896739896456,34.9380065301992,45.1808878167375,24.7735186811748,0.309868802321207,0,0.293600439334847,1.66198622559563,0.200544447470142,0.868043482863407,0.223915474239924,0,0,1.16318591023652,0,0.485168122375632,0,0.822335776043652,0,0,0.256160706529101,0,0.689491361473237,0,0,1.12945403725563,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0.426224750532694,0.290209238628584,0,0,0.75374599577023,0.521482918420201,0,0.605399502633369,0,0,0,0.212604299965044,0,0.44931452458598,1.20141514273205,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,0,0,0,2.64342657158052,1.12101712596307,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0.802320587350522,0.289648807765598,0,0,0.12786256184353,4.69870898099936,4.51204119572301,3.18662341713812,7.15757352345989,4.86634870302636,0.189069634328136,0.886917589850256,0.702678285545008,0.458426764241994,17.486173838042,14.4605932685927,0,0.174129737299267,0,0,0,0,2.58391129576717,0.860234595106124,1.04142150482278,1.13061588384802,1.67799774483962,0.825354125820202,2.08994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.803697554556718,0.22452937262617,0.900891843866578,0,3.79706263827252,0,1.31780417436063,3.87780264148325,14.8271977728462,0,1.51956613997496,1.32409180813219,0,1.41867352879343,1.12135520028461,0,3.20667812942308,0.622422070799533,0.269421344139376,0.163461903113459,0.151357427644931,0,0,5.93104145977609,5.70471821544449,1.79338416662161,0.469737994575059,0.323745888736263,0.421352420106746,1.42907919878425,1.59684612505298,1.34323515528495,0,0.494533858557114,0.910161361938026,2.15585442544872,0.673344455816265,0.625592599359821,0.831192346452549,3.07284334616587,1.5324389789951,1.05166641234618,0.453728732640084,0.179389635688862,0,1.27159140695737,0.600182192168805,1.23663035086127,0.257640540045629,0.744467425326359,0,0.487185025805993,0.504867548488229,1.38074847963449,0.484938170456436,0,1.41052937518696,1.69560592310488,14.8810856935739,11.1825909442242,9.17774705244812,0.609868530647977,0.397589304964456,0.464775771478074,1.55491582523056,1.51392510525377,0.36497735907583,6.25798129319264,12.2215778256648,9.66944449467364,2.3218396401599,5.0531563716871,9.10962360306798,8.59781919398319,5.78426471720357,7.83087206399997,7.84365998732662,5.21995362044413,8.35954110593019,9.61485179114196,11.9271618653381,0.738155454624648,2.80483547606892,0,1.47008711385542,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,10.8652782554539,22.4803506515239,14.3756430548632,8.42554850942619,0.325808305310325,1.03993478527958,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0.468008530278475,0.148631162288728,9.3733833986777,15.7903200506928,10.9166824876638,24.6285937432833,16.5661344952958,34.8878238040342,0,0.176096868026452,0.207328115540772,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.646358578788889,0,0,3.19125739901845,6.24044621468197,1.54324424557285,4.25547396069835,2.93064396917709,1.28680194292333,0.542621605391443,0.823240336780769,0.325736184293735,1.06617584622764,0,4.52159065589379,9.58686804460323,5.39854152383108,1.2162378064119,0,0,1.67737398844108,0,8.5582143024431,1.59259437334337,4.10952645100767,4.29746311775749,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,1.49801404789436,2.99161459204025,3.72973962092432,5.15304265220388,10.5035809422532,4.34024037919577,0.831883446123229,1.42743191037729,1.26161932027148,0.702848489956279,3.61135319673263,13.6444502433591,1.03473071292505,0.664225598535437,4.79359838208428,1.82455590382974,1.76221041716467,1.02943027143257,2.06768026122887,1.50999940573032,1.49418580924822,1.21251028578504,8.32177197552485,0.30239029332968,0.496215615637554,0.306923946576125,1.40330047216537,0.768834895534206,0,0.321707842287215,0,0.925258162815933,0.887808626565635,1.14978018419333,2.59627214591811,0.929683027679674,0.362578348774867,20.0506470303285,4.78821142466661,3.21480454860899,1.63882051206045,4.58935452357984,4.51199612907412,4.6979355633693,6.27479815341484,8.76835347919564,5.48868470242954,0,0.510281115829547,1.29549549661284,1.54227252690289,5.41892875087706,6.52196706011309,4.07802036872061,5.81753206250107,7.61174166055406,2.19259876645935,1.8300481571743,1.02580050046556,0.328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|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,1.74467704820074,0,2.52687949370732,0.261185628199839,8.84642171405432,27.2142455509247,2.40285509343189,0.791300934685361,7.4259811776028,10.6047160232933,2.6893005858071,1.80808358407193,5.11217063271161,1.95173119516203,0.492484232307152,0.204000691244253,0,0,0.684372125364421,0.125542639594803,0.0764134057479513,0.0821005894499457,0,3.14691421479123,0.767658796194425,0.928896739896456,34.9380065301992,45.1808878167375,24.7735186811748,0.309868802321207,0,0.293600439334847,1.66198622559563,0.200544447470142,0.868043482863407,0.223915474239924,0,0,1.16318591023652,0,0.485168122375632,0,0.822335776043652,0,0,0.256160706529101,0,0.689491361473237,0,0,1.12945403725563,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0.426224750532694,0.290209238628584,0,0,0.75374599577023,0.521482918420201,0,0.605399502633369,0,0,0,0.212604299965044,0,0.44931452458598,1.20141514273205,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,0,0,0,2.64342657158052,1.12101712596307,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0.821127996921047,0,0.802320587350522,0.289648807765598,0,0,0.12786256184353,4.69870898099936,4.51204119572301,3.18662341713812,7.15757352345989,4.86634870302636,0.189069634328136,0.886917589850256,0.702678285545008,0.458426764241994,17.486173838042,14.4605932685927,0,0.174129737299267,0,0,0,0,2.58391129576717,0.860234595106124,1.04142150482278,1.13061588384802,1.67799774483962,0.825354125820202,2.08994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.803697554556718,0.22452937262617,0.900891843866578,0,3.79706263827252,0,1.31780417436063,3.87780264148325,14.8271977728462,0,1.51956613997496,1.32409180813219,0,1.41867352879343,1.12135520028461,0,3.20667812942308,0.622422070799533,0.269421344139376,0.163461903113459,0.151357427644931,0,0,5.93104145977609,5.70471821544449,1.79338416662161,0.469737994575059,0.323745888736263,0.421352420106746,1.42907919878425,1.59684612505298,1.34323515528495,0,0.494533858557114,0.910161361938026,2.15585442544872,0.673344455816265,0.625592599359821,0.831192346452549,3.07284334616587,1.5324389789951,1.05166641234618,0.453728732640084,0.179389635688862,0,1.27159140695737,0.600182192168805,1.23663035086127,0.257640540045629,0.744467425326359,0,0.487185025805993,0.504867548488229,1.38074847963449,0.484938170456436,0,1.41052937518696,1.69560592310488,14.8810856935739,11.1825909442242,9.17774705244812,0.609868530647977,0.397589304964456,0.464775771478074,1.55491582523056,1.51392510525377,0.36497735907583,6.25798129319264,12.2215778256648,9.66944449467364,2.3218396401599,5.0531563716871,9.10962360306798,8.59781919398319,5.78426471720357,7.83087206399997,7.84365998732662,5.21995362044413,8.35954110593019,9.61485179114196,11.9271618653381,0.738155454624648,2.80483547606892,0,1.47008711385542,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,10.8652782554539,22.4803506515239,14.3756430548632,8.42554850942619,0.325808305310325,1.03993478527958,0,0.115930404975077,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0.468008530278475,0.148631162288728,9.3733833986777,15.7903200506928,10.9166824876638,24.6285937432833,16.5661344952958,34.8878238040342,0,0.176096868026452,0.207328115540772,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.646358578788889,0,0,3.19125739901845,6.24044621468197,1.54324424557285,4.25547396069835,2.93064396917709,1.28680194292333,0.542621605391443,0.823240336780769,0.325736184293735,1.06617584622764,0,4.52159065589379,9.58686804460323,5.39854152383108,1.2162378064119,0,0,1.67737398844108,0,8.5582143024431,1.59259437334337,4.10952645100767,4.29746311775749,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,1.49801404789436,2.99161459204025,3.72973962092432,5.15304265220388,10.5035809422532,4.34024037919577,0.831883446123229,1.42743191037729,1.26161932027148,0.702848489956279,3.61135319673263,13.6444502433591,1.03473071292505,0.664225598535437,4.79359838208428,1.82455590382974,1.76221041716467,1.02943027143257,2.06768026122887,1.50999940573032,1.49418580924822,1.21251028578504,8.32177197552485,0.30239029332968,0.496215615637554,0.306923946576125,1.40330047216537,0.768834895534206,0,0.321707842287215,0,0.925258162815933,0.887808626565635,1.14978018419333,2.59627214591811,0.929683027679674,0.362578348774867,20.0506470303285,4.78821142466661,3.21480454860899,1.63882051206045,4.58935452357984,4.51199612907412,4.6979355633693,6.27479815341484,8.76835347919564,5.48868470242954,0,0.510281115829547,1.29549549661284,1.54227252690289,5.41892875087706,6.52196706011309,4.07802036872061,5.81753206250107,7.61174166055406,2.19259876645935,1.8300481571743,1.02580050046556,0.328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| ||
|short_description=p2@TUBA4A | |||
}} | }} |
Latest revision as of 20:01, 24 September 2015
Short description: | p2@TUBA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBA4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000447205_5end |
EntrezGene: | TUBA4A |
HGNC: | 12407 |
UniProt: | C9JEV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.62e-15 | 253 |
embryonic cell | 6.79e-10 | 250 |
endo-epithelial cell | 6.58e-09 | 42 |
respiratory epithelial cell | 2.79e-08 | 13 |
general ecto-epithelial cell | 1.10e-07 | 14 |
kidney tubule cell | 6.04e-07 | 10 |
nephron tubule epithelial cell | 6.04e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.89e-10 | 83 |
respiratory primordium | 3.22e-08 | 38 |
endoderm of foregut | 3.22e-08 | 38 |
epithelial vesicle | 1.06e-07 | 78 |
respiratory system | 1.82e-07 | 74 |
endoderm-derived structure | 1.87e-07 | 160 |
endoderm | 1.87e-07 | 160 |
presumptive endoderm | 1.87e-07 | 160 |
larynx | 2.34e-07 | 9 |
respiratory tract | 2.58e-07 | 54 |
nephron tubule epithelium | 6.04e-07 | 10 |
somite | 8.50e-07 | 71 |
presomitic mesoderm | 8.50e-07 | 71 |
presumptive segmental plate | 8.50e-07 | 71 |
dermomyotome | 8.50e-07 | 71 |
trunk paraxial mesoderm | 8.50e-07 | 71 |
segment of respiratory tract | 9.53e-07 | 47 |
trunk mesenchyme | 9.72e-07 | 122 |