FFCP PHASE1:Hg19::chr1:209848991..209849012,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:209848991..209849012,+ to FFCP PHASE1:Hg19::chr1:209848991..209849012,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50486 | |EntrezGene=50486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30229 | |HGNC=30229 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FGC8 | |UniProt=Q6FGC8 | ||
|association_with_transcript=-17bp_to_BT007101,CR542179,CR542193,DQ894610,EU176279_5end | |||
|cluster_id=chr1:209848991..209849012,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_7_at_G0S2_5end | |||
|id=chr1:209848991..209849012,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.44e-21!42;CL:0000766!6.92e-20!76;CL:0000860!4.79e-19!45;CL:0002009!2.31e-13!65;CL:0000557!3.23e-13!71;CL:0002194!5.02e-13!63;CL:0000576!5.02e-13!63;CL:0000040!5.02e-13!63;CL:0000559!5.02e-13!63;CL:0000839!1.54e-12!70;CL:0000094!2.29e-11!8;CL:0000738!6.04e-11!140;CL:0000763!6.65e-10!112;CL:0000049!6.65e-10!112;CL:0000081!1.23e-07!11;CL:0000136!2.64e-07!15;CL:0002087!3.43e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-32;33!CL:0002057;1.54e-32;33!CL:0000094;7.78e-27;8!CL:0000473;6.71e-23;39!CL:0000234;6.71e-23;39!CL:0000081;3.99e-19;11!CL:0000766;6.11e-19;69!CL:0000576;1.69e-18;48!CL:0000136;1.91e-12;13!CL:0000775;1.10e-11;3!CL:0000767;4.94e-10;3!CL:0000763;6.75e-09;100!CL:0000771;1.27e-08;2!CL:0002087;4.95e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.60e-40,72;CL:0000860,5.17e-37,42;CL:0002057,5.17e-37,42;CL:0000473,1.30e-31,48;CL:0000234,1.30e-31,48;CL:0000094,6.18e-27,8;CL:0000763,1.39e-25,108;CL:0000049,1.39e-25,108;CL:0002009,2.93e-25,61;CL:0000557,1.60e-24,67;CL:0002194,4.55e-24,59;CL:0000576,4.55e-24,59;CL:0000040,4.55e-24,59;CL:0000559,4.55e-24,59;CL:0000839,6.57e-23,66;CL:0000738,1.54e-21,136;CL:0000081,3.39e-19,11;CL:0000037,8.38e-16,168;CL:0000988,1.44e-14,177;CL:0002032,1.74e-14,161;CL:0000837,1.74e-14,161;CL:0002087,7.19e-12,115;CL:0000775,1.09e-11,3;CL:0002031,5.08e-11,120;CL:0000136,1.28e-10,15;CL:0000767,4.15e-10,3;CL:0000134,1.62e-09,354;CL:0002320,3.95e-09,361;CL:0000771,1.22e-08,2;CL:0000219,8.93e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.26e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.35e-11!80;UBERON:0001474!1.61e-10!86;UBERON:0002390!3.59e-10!102;UBERON:0003061!3.59e-10!102;UBERON:0002193!6.81e-09!112;UBERON:0004765!1.68e-08!101;UBERON:0001434!1.68e-08!101;UBERON:0002405!9.23e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.81e-21,76;UBERON:0001474,1.03e-20,82;UBERON:0004765,2.65e-18,90;UBERON:0002390,8.18e-18,98;UBERON:0003061,8.18e-18,98;UBERON:0002405,1.86e-17,93;UBERON:0002193,6.15e-17,108;UBERON:0001434,7.74e-16,100;UBERON:0002384,1.33e-08,371;UBERON:0003081,2.69e-07,203;UBERON:0002204,4.62e-07,167 | |||
|phase1_expression=0,1.2846031433459,0.422863212287913,0,0.446961094427288,0,7.59899634504932,0,3.91778442299758,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.53531759238885,1.23852898652861,1.83884244895785,0.90361775633475,5.9160641626686,0,0,0,7.20194031091441,7.62068900386538,5.859293509328,0,0,0,0,0,0,1.16214518452842,0,1.54853185447552,1.43846196161075,1.5369642391746,1.18241114944293,6.20542225325913,4.51839278508678,9.47985406160392,2.07066573496865,0.272906150057846,1.34834090667051,7.65209730927256,4.8139354061414,8.31138263538754,0,0,0,3.19230162491442,5.10646702222026,9.9651559839292,0.502497330513487,1.5644487552606,1.08594422352558,0.605399502633369,2.57794345191295,4.1140110367315,0,0.212604299965044,0,0.336985893439485,0.600707571366025,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,3.36305137788922,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,11.6334079244498,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0.936480230490962,0,0,0,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0,0.414656231081544,0,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0.254094624222463,0,0,0,0,7.49007023947182,5.9832291840805,9.94597232246485,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0.206768026122887,2.37285620900479,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0.519254429183621,0,0.120859449591622,1.00253235151642,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,1.72971060628596,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,2.98288549449087,2.68120910214315,0,0.282431402330337,2.15252686335615,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0.445234820091624,0.494411622680279,0,0,0.276283915531148,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0.432271251462318,0,0.171594997861965,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,1.3749625440701,0.717873024576814,0.399358000997982,0.858452096273142,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0.129282956361551,0.13223260174269,0,0,0.640724475406168,0,0.414239055347196,0,0,0,0,6.52821364043369,4.0110383043632,6.43325711203269,11.4755420748432,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0.265841714557995,0,0,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0.211312123358627,0.59996218756479,0,0.172214979660816,0,0,0.139879507719444,1.86623178009892,0.127894371303652,0,0.157265941855896,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0.225630985047772,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0.430227358820278,0.118332000730565,0.170426809518315,2.11693525095465,0,1.5510319283216,0,0,0,0,0.647428837187895,0.821302454849976,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.849635573439084,0.0939839179798536,0.0644578879735772,0,0,1.05868461514708,0.160482733378337,0,1.83491713361816,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0,0,0.224263725161227,0,0,0.217716747896961,0,0,0.430333232356058,0,0.0814032686109745,0,0,0,0,0,0,0,1.00636896795513,0 | |phase1_expression=0,1.2846031433459,0.422863212287913,0,0.446961094427288,0,7.59899634504932,0,3.91778442299758,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.53531759238885,1.23852898652861,1.83884244895785,0.90361775633475,5.9160641626686,0,0,0,7.20194031091441,7.62068900386538,5.859293509328,0,0,0,0,0,0,1.16214518452842,0,1.54853185447552,1.43846196161075,1.5369642391746,1.18241114944293,6.20542225325913,4.51839278508678,9.47985406160392,2.07066573496865,0.272906150057846,1.34834090667051,7.65209730927256,4.8139354061414,8.31138263538754,0,0,0,3.19230162491442,5.10646702222026,9.9651559839292,0.502497330513487,1.5644487552606,1.08594422352558,0.605399502633369,2.57794345191295,4.1140110367315,0,0.212604299965044,0,0.336985893439485,0.600707571366025,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,3.36305137788922,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,11.6334079244498,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0.936480230490962,0,0,0,0,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0,0.414656231081544,0,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0.254094624222463,0,0,0,0,7.49007023947182,5.9832291840805,9.94597232246485,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0.206768026122887,2.37285620900479,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0.519254429183621,0,0.120859449591622,1.00253235151642,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,1.72971060628596,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,2.98288549449087,2.68120910214315,0,0.282431402330337,2.15252686335615,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0.445234820091624,0.494411622680279,0,0,0.276283915531148,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0.432271251462318,0,0.171594997861965,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,1.3749625440701,0.717873024576814,0.399358000997982,0.858452096273142,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0.129282956361551,0.13223260174269,0,0,0.640724475406168,0,0.414239055347196,0,0,0,0,6.52821364043369,4.0110383043632,6.43325711203269,11.4755420748432,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0.265841714557995,0,0,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0.211312123358627,0.59996218756479,0,0.172214979660816,0,0,0.139879507719444,1.86623178009892,0.127894371303652,0,0.157265941855896,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0.225630985047772,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.521574816907738,0,0,0,0,0.430227358820278,0.118332000730565,0.170426809518315,2.11693525095465,0,1.5510319283216,0,0,0,0,0.647428837187895,0.821302454849976,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0.849635573439084,0.0939839179798536,0.0644578879735772,0,0,1.05868461514708,0.160482733378337,0,1.83491713361816,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0,0,0.224263725161227,0,0,0.217716747896961,0,0,0.430333232356058,0,0.0814032686109745,0,0,0,0,0,0,0,1.00636896795513,0 | ||
|short_description=p7@G0S2 | |||
}} | }} |
Latest revision as of 20:22, 24 September 2015
Short description: | p7@G0S2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_G0S2_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -17bp_to_BT007101, CR542179, CR542193, DQ894610, EU176279_5end |
EntrezGene: | G0S2 |
HGNC: | 30229 |
UniProt: | Q6FGC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.60e-40 | 72 |
classical monocyte | 5.17e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.17e-37 | 42 |
defensive cell | 1.30e-31 | 48 |
phagocyte | 1.30e-31 | 48 |
granulocyte | 6.18e-27 | 8 |
myeloid cell | 1.39e-25 | 108 |
common myeloid progenitor | 1.39e-25 | 108 |
macrophage dendritic cell progenitor | 2.93e-25 | 61 |
granulocyte monocyte progenitor cell | 1.60e-24 | 67 |
monopoietic cell | 4.55e-24 | 59 |
monocyte | 4.55e-24 | 59 |
monoblast | 4.55e-24 | 59 |
promonocyte | 4.55e-24 | 59 |
myeloid lineage restricted progenitor cell | 6.57e-23 | 66 |
leukocyte | 1.54e-21 | 136 |
blood cell | 3.39e-19 | 11 |
hematopoietic stem cell | 8.38e-16 | 168 |
hematopoietic cell | 1.44e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.74e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.74e-14 | 161 |
nongranular leukocyte | 7.19e-12 | 115 |
neutrophil | 1.09e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 5.08e-11 | 120 |
fat cell | 1.28e-10 | 15 |
basophil | 4.15e-10 | 3 |
mesenchymal cell | 1.62e-09 | 354 |
connective tissue cell | 3.95e-09 | 361 |
eosinophil | 1.22e-08 | 2 |
motile cell | 8.93e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.81e-21 | 76 |
bone element | 1.03e-20 | 82 |
skeletal element | 2.65e-18 | 90 |
hematopoietic system | 8.18e-18 | 98 |
blood island | 8.18e-18 | 98 |
immune system | 1.86e-17 | 93 |
hemolymphoid system | 6.15e-17 | 108 |
skeletal system | 7.74e-16 | 100 |
connective tissue | 1.33e-08 | 371 |
lateral plate mesoderm | 2.69e-07 | 203 |
musculoskeletal system | 4.62e-07 | 167 |