FFCP PHASE1:Hg19::chr1:209849268..209849353,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50486 | |EntrezGene=50486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30229 | |HGNC=30229 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FGC8 | |UniProt=Q6FGC8 | ||
|association_with_transcript=238bp_to_BT007101,CR542179,CR542193,DQ894610,EU176279_5end | |association_with_transcript=238bp_to_BT007101,CR542179,CR542193,DQ894610,EU176279_5end | ||
|cluster_id=chr1:209849268..209849353,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_G0S2_5end | |description=CAGE_peak_2_at_G0S2_5end | ||
|id=chr1:209849268..209849353,+ | |id=chr1:209849268..209849353,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.58e-26!42;CL:0000860!3.47e-23!45;CL:0000766!2.51e-21!76;CL:0002009!1.26e-17!65;CL:0000557!8.30e-17!71;CL:0002194!1.71e-16!63;CL:0000576!1.71e-16!63;CL:0000040!1.71e-16!63;CL:0000559!1.71e-16!63;CL:0000839!3.34e-15!70;CL:0000763!3.82e-10!112;CL:0000049!3.82e-10!112;CL:0000738!1.42e-09!140;CL:0000094!1.67e-07!8;CL:0000136!1.86e-07!15;CL:0002087!9.92e-07!119 | |ontology_enrichment_celltype=CL:0002057!2.58e-26!42;CL:0000860!3.47e-23!45;CL:0000766!2.51e-21!76;CL:0002009!1.26e-17!65;CL:0000557!8.30e-17!71;CL:0002194!1.71e-16!63;CL:0000576!1.71e-16!63;CL:0000040!1.71e-16!63;CL:0000559!1.71e-16!63;CL:0000839!3.34e-15!70;CL:0000763!3.82e-10!112;CL:0000049!3.82e-10!112;CL:0000738!1.42e-09!140;CL:0000094!1.67e-07!8;CL:0000136!1.86e-07!15;CL:0002087!9.92e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-27;33!CL:0002057;1.41e-27;33!CL:0000473;9.49e-20;39!CL:0000234;9.49e-20;39!CL:0000576;3.84e-16;48!CL:0000766;6.80e-14;69!CL:0000136;2.88e-11;13!CL:0000094;4.40e-11;8!CL:0000081;1.80e-07;11!CL:0002368;2.31e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.48e-31,42;CL:0002057,2.48e-31,42;CL:0000473,3.05e-27,48;CL:0000234,3.05e-27,48;CL:0000766,2.00e-26,72;CL:0002009,3.91e-22,61;CL:0002194,2.01e-20,59;CL:0000576,2.01e-20,59;CL:0000040,2.01e-20,59;CL:0000559,2.01e-20,59;CL:0000557,5.03e-20,67;CL:0000839,5.97e-18,66;CL:0000763,2.10e-14,108;CL:0000049,2.10e-14,108;CL:0000738,1.46e-13,136;CL:0000094,4.82e-11,8;CL:0002087,1.55e-09,115;CL:0000136,2.17e-09,15;CL:0002031,1.32e-08,120;CL:0000037,4.19e-08,168;CL:0000988,7.81e-08,177;CL:0002032,1.66e-07,161;CL:0000837,1.66e-07,161;CL:0000081,1.91e-07,11;CL:0002368,2.56e-07,13 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.35e-14!80;UBERON:0001474!3.92e-12!86;UBERON:0004765!3.27e-11!101;UBERON:0001434!3.27e-11!101;UBERON:0002390!3.76e-11!102;UBERON:0003061!3.76e-11!102;UBERON:0002193!1.45e-10!112;UBERON:0002405!2.27e-10!115;UBERON:0000479!3.97e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.95e-16,76;UBERON:0001474,4.86e-14,82;UBERON:0002390,5.61e-13,98;UBERON:0003061,5.61e-13,98;UBERON:0002405,1.22e-12,93;UBERON:0004765,1.39e-12,90;UBERON:0002193,3.98e-12,108;UBERON:0001434,1.20e-11,100 | |||
|phase1_expression=0.54503513781167,17.7703434829516,1.69145284915165,3.00219895059391,14.7497161161005,0,22.796989035148,4.42203911398782,24.290263422585,0,0,0,0,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,2.36018566109342,3.45446458287491,3.09632246632152,17.4690032650996,15.0602959389125,28.8408127930094,0,0,0,14.9578760303607,21.8593447742454,25.3902718737547,0,0,0,0.726991193897824,0.377875943688809,0.970336244751265,8.83230340241602,6.57868620834921,9.91060386864331,12.3707728698525,7.68482119587302,12.7700404139836,30.6823655855591,37.4381116478619,58.233389235567,8.84738995850242,6.27684145133045,8.98893937780339,57.5437717657297,30.4882575722289,58.1796784477128,1.31940520074686,1.79517291859469,1.70489900213078,30.7621792946299,22.6954089876456,51.0714244176371,7.78870862295904,7.30076085788282,9.77349801173025,10.2917915447673,11.0483290796269,25.6334533827116,1.69004229049553,2.12604299965044,0.628975936525128,1.01095768031846,2.25265339262259,4.50031642751824,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0,1.32171328579026,3.36305137788922,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,1.94653948121054,0,0,0.263504357079378,0.458426764241994,2.5500670180478,1.48313777113772,0,0,0.531831842075461,0,0,0.371457501329565,0,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0.366403487860815,79.068250461638,127.967487168947,1.3082821564276,0.496971951695318,0,0,0,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0,0.605429710579726,0.576175924479999,0.937285727335186,0.936480230490962,0,0.298897361103602,0,0.161872944368132,0,0,0,0,0,0,1.82032272387605,12.9351265526923,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0.57978255948989,1.90922284413584,4.30206893083506,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,14.7424082501644,1.77236972004421,0,0.860919069801795,0,3.73150970389327,1.1240175325762,0.402115889646523,1.01847289674383,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0.503946384596579,3.82792762554443,1.07470227243418,0,2.30029607499127,0,0,0.829312462163088,0.432359860250884,1.13618190083742,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.36669142910475,0,0,1.690605505112,0,0,0,0,0.532844358032199,0.285955987316295,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,1.02674429023799,0,0,0,0,0,78.6457375144542,113.681354497529,49.3154460988882,0,0,0.542530047399471,0,0,0,0.234282829985426,0,0,2.0694614258501,0,0.184369168541703,1.21637060255316,1.95801157462741,1.02943027143257,1.03384013061444,17.472850266308,4.16237475433433,0,0,0,0.248107807818777,0,0,0.384417447767103,0.511707249066704,0.160853921143607,0,2.62156479464514,0,0,2.59627214591811,0.116210378459959,0,10.4263364557708,3.49907757956406,0.68888668898764,0,0.262248829918848,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,1.53084334748864,0,0,0,0,1.01950509218015,4.15538004464362,0,0,0,0,0,0,0.721287081534056,0,0,0,3.90036147621913,0,0.096670718292122,0,0.921022048356777,0,0.107420244868274,0,0.0852266274161009,0,7.93367593732695,10.1860735703506,0.638063562472921,1.2138933702666,0,0,0,0.616067160352178,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0.855877976067841,0.318203247925937,0,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,1.21856744815642,1.05650146756755,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,2.31510213706675,0,0,0,0,0,0,0,0,3.58882980006029,2.96365403663912,0,0,10.7768766252574,9.38423185750102,17.4225575778116,0.941438007767792,3.01353760869861,5.05414427002877,4.43430153536676,1.83778720165568,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,2.93016358543788,0,0,0.568272293612826,0,0.296964680832639,0.307160702099232,0,0,1.22439575525196,5.10892010102955,0,1.39473591775749,0.276283915531148,0,0,0,0,0.988551862620595,0,0,0.591860433821602,7.18449277040819,0,0,0.0927680981618513,0,0,0,6.52499617891314,0,0,0,0,0,0,0,0,1.52581736317083,0.110579259931225,0.295547618953547,0,0,0,0,0.113942055847001,0,0,0,0,0,1.06606955203727,0,0,0,0.225595660617181,0,0,0,0.158936578980379,1.47698645169619,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0.789168805698781,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0,1.58971689362392,0,0,0.0801588202515337,0,0,1.15272333723285,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,1.67569440763353,5.27068975226872,5.74298419661451,1.99679000498991,3.4338083850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| 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| ||
|short_description=p2@G0S2 | |short_description=p2@G0S2 | ||
}} | }} |
Latest revision as of 20:23, 24 September 2015
Short description: | p2@G0S2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_G0S2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 238bp_to_BT007101, CR542179, CR542193, DQ894610, EU176279_5end |
EntrezGene: | G0S2 |
HGNC: | 30229 |
UniProt: | Q6FGC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.48e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.48e-31 | 42 |
defensive cell | 3.05e-27 | 48 |
phagocyte | 3.05e-27 | 48 |
myeloid leukocyte | 2.00e-26 | 72 |
macrophage dendritic cell progenitor | 3.91e-22 | 61 |
monopoietic cell | 2.01e-20 | 59 |
monocyte | 2.01e-20 | 59 |
monoblast | 2.01e-20 | 59 |
promonocyte | 2.01e-20 | 59 |
granulocyte monocyte progenitor cell | 5.03e-20 | 67 |
myeloid lineage restricted progenitor cell | 5.97e-18 | 66 |
myeloid cell | 2.10e-14 | 108 |
common myeloid progenitor | 2.10e-14 | 108 |
leukocyte | 1.46e-13 | 136 |
granulocyte | 4.82e-11 | 8 |
nongranular leukocyte | 1.55e-09 | 115 |
fat cell | 2.17e-09 | 15 |
hematopoietic lineage restricted progenitor cell | 1.32e-08 | 120 |
hematopoietic stem cell | 4.19e-08 | 168 |
hematopoietic cell | 7.81e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.66e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-07 | 161 |
blood cell | 1.91e-07 | 11 |
respiratory epithelial cell | 2.56e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.95e-16 | 76 |
bone element | 4.86e-14 | 82 |
hematopoietic system | 5.61e-13 | 98 |
blood island | 5.61e-13 | 98 |
immune system | 1.22e-12 | 93 |
skeletal element | 1.39e-12 | 90 |
hemolymphoid system | 3.98e-12 | 108 |
skeletal system | 1.20e-11 | 100 |