FFCP PHASE1:Hg19::chr18:9191997..9192008,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:9191997..9192008,+ | |||
|coexpression_cluster_id=C370 | |||
|description=CAGE_peak_at_chr18:9191997..9192008,+ | |description=CAGE_peak_at_chr18:9191997..9192008,+ | ||
|id=chr18:9191997..9192008,+ | |id=chr18:9191997..9192008,+ | ||
|ontology_enrichment_celltype=CL:0000764!4.49e-19!2;CL:0000765!4.49e-19!2;CL:0000050!4.49e-19!2;CL:0000038!4.49e-19!2;CL:0000558!4.49e-19!2;CL:0000547!4.49e-19!2;CL:0000549!4.49e-19!2;CL:0000550!4.49e-19!2;CL:0000552!4.49e-19!2;CL:0000763!3.75e-17!112;CL:0000049!3.75e-17!112;CL:0002032!8.58e-11!165;CL:0000837!8.58e-11!165;CL:0000037!3.04e-10!172;CL:0000566!3.04e-10!172;CL:0000988!1.57e-09!182;CL:0000453!1.02e-07!5 | |ontology_enrichment_celltype=CL:0000764!4.49e-19!2;CL:0000765!4.49e-19!2;CL:0000050!4.49e-19!2;CL:0000038!4.49e-19!2;CL:0000558!4.49e-19!2;CL:0000547!4.49e-19!2;CL:0000549!4.49e-19!2;CL:0000550!4.49e-19!2;CL:0000552!4.49e-19!2;CL:0000763!3.75e-17!112;CL:0000049!3.75e-17!112;CL:0002032!8.58e-11!165;CL:0000837!8.58e-11!165;CL:0000037!3.04e-10!172;CL:0000566!3.04e-10!172;CL:0000988!1.57e-09!182;CL:0000453!1.02e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.18e-34;2!CL:0000558;2.18e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.18e-34,2;CL:0000765,2.18e-34,2;CL:0000050,2.18e-34,2;CL:0000038,2.18e-34,2;CL:0000558,2.18e-34,2;CL:0000547,2.18e-34,2;CL:0000549,2.18e-34,2;CL:0000550,2.18e-34,2;CL:0000552,2.18e-34,2;CL:0000763,2.01e-14,108;CL:0000049,2.01e-14,108;CL:0002032,1.99e-09,161;CL:0000837,1.99e-09,161;CL:0000037,5.33e-09,168;CL:0000988,1.69e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.77e-39!8;DOID:8692!6.33e-27!31;DOID:1240!4.26e-21!39;DOID:2531!8.92e-16!51;DOID:0060083!8.92e-16!51;DOID:8552!2.84e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.31e-33;8!DOID:8692;3.63e-32;31!DOID:1240;1.87e-21;39!DOID:8552;6.78e-18;1!DOID:2531;2.66e-15;51!DOID:0060083;2.66e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.88e-33,31;DOID:1036,3.36e-33,8;DOID:1240,1.63e-26,39;DOID:2531,3.56e-20,51;DOID:0060083,3.56e-20,51;DOID:8552,7.37e-18,1;DOID:0050686,4.36e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002146!6.91e-10!1;UBERON:0005623!6.91e-10!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr18:9191997..9192008,+ | |short_description=p@chr18:9191997..9192008,+ | ||
}} | }} |
Latest revision as of 21:41, 24 September 2015
Short description: | p@chr18:9191997..9192008, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:9191997..9192008, + |
Coexpression cluster: | C370_acute_chronic_leukemia_CD34_testicular_Mast_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.18e-34 | 2 |
erythroblast | 2.18e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 2.18e-34 | 2 |
erythroid progenitor cell | 2.18e-34 | 2 |
reticulocyte | 2.18e-34 | 2 |
proerythroblast | 2.18e-34 | 2 |
basophilic erythroblast | 2.18e-34 | 2 |
polychromatophilic erythroblast | 2.18e-34 | 2 |
orthochromatic erythroblast | 2.18e-34 | 2 |
myeloid cell | 2.01e-14 | 108 |
common myeloid progenitor | 2.01e-14 | 108 |
hematopoietic oligopotent progenitor cell | 1.99e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-09 | 161 |
hematopoietic stem cell | 5.33e-09 | 168 |
hematopoietic cell | 1.69e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.88e-33 | 31 |
chronic leukemia | 3.36e-33 | 8 |
leukemia | 1.63e-26 | 39 |
hematologic cancer | 3.56e-20 | 51 |
immune system cancer | 3.56e-20 | 51 |
chronic myeloid leukemia | 7.37e-18 | 1 |
organ system cancer | 4.36e-07 | 137 |