FFCP PHASE1:Hg19::chr8:103250815..103250825,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50484 | |EntrezGene=50484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17296 | |HGNC=17296 | ||
|TSSclassifier=strong | |||
|UniProt=B4E2N4 | |UniProt=B4E2N4 | ||
|association_with_transcript=177bp_to_ENST00000535248,uc003yko.2_5end | |association_with_transcript=177bp_to_ENST00000535248,uc003yko.2_5end | ||
|cluster_id=chr8:103250815..103250825,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_14_at_RRM2B_5end | |description=CAGE_peak_14_at_RRM2B_5end | ||
|id=chr8:103250815..103250825,- | |id=chr8:103250815..103250825,- | ||
|ontology_enrichment_celltype=CL:0000738!6.56e-13!140;CL:0000037!9.09e-13!172;CL:0000566!9.09e-13!172;CL:0000988!1.06e-12!182;CL:0000094!2.76e-11!8;CL:0002032!1.33e-10!165;CL:0000837!1.33e-10!165;CL:0000081!1.27e-09!11;CL:0000134!3.48e-09!358;CL:0002320!1.65e-08!365;CL:0002087!3.26e-08!119;CL:0000766!3.87e-08!76;CL:0000763!9.16e-08!112;CL:0000049!9.16e-08!112;CL:0000003!1.13e-07!722;CL:0000219!1.65e-07!390;CL:0000063!7.03e-07!578;CL:0002031!8.84e-07!124 | |ontology_enrichment_celltype=CL:0000738!6.56e-13!140;CL:0000037!9.09e-13!172;CL:0000566!9.09e-13!172;CL:0000988!1.06e-12!182;CL:0000094!2.76e-11!8;CL:0002032!1.33e-10!165;CL:0000837!1.33e-10!165;CL:0000081!1.27e-09!11;CL:0000134!3.48e-09!358;CL:0002320!1.65e-08!365;CL:0002087!3.26e-08!119;CL:0000766!3.87e-08!76;CL:0000763!9.16e-08!112;CL:0000049!9.16e-08!112;CL:0000003!1.13e-07!722;CL:0000219!1.65e-07!390;CL:0000063!7.03e-07!578;CL:0002031!8.84e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.07e-37;8!CL:0000775;1.84e-36;3!CL:0000784;2.53e-35;3!CL:0000081;3.10e-27;11!CL:0000771;3.88e-25;2!CL:0000451;2.82e-17;10!CL:0002032;7.24e-13;1!CL:0000557;7.24e-13;1!CL:0000840;9.08e-09;5!CL:0001014;2.74e-07;2!CL:0001016;2.74e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.08e-37,8;CL:0000775,1.85e-36,3;CL:0000784,2.25e-35,3;CL:0000081,3.10e-27,11;CL:0000771,3.89e-25,2;CL:0000451,2.71e-17,10;CL:0000037,5.24e-10,168;CL:0000763,1.52e-09,108;CL:0000049,1.52e-09,108;CL:0000988,2.08e-09,177;CL:0000738,5.80e-09,136;CL:0000840,7.93e-09,5;CL:0001029,7.93e-09,5;CL:0000766,2.39e-07,72;CL:0002032,2.50e-07,161;CL:0000837,2.50e-07,161;CL:0001014,2.74e-07,2;CL:0001016,2.74e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.24e-13;1!DOID:0060061;7.24e-13;1!DOID:8691;7.24e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.38e-13,1;DOID:0060061,5.38e-13,1;DOID:8691,5.38e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.81e-08!102;UBERON:0003061!1.81e-08!102;UBERON:0002193!7.27e-08!112;UBERON:0002384!1.31e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!1.81e-08!102;UBERON:0003061!1.81e-08!102;UBERON:0002193!7.27e-08!112;UBERON:0002384!1.31e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0.369754010166788,0.154934401160603,0.426507697462265,0,0,0.200544447470142,1.08505435357926,0,0,0,0.436194716338694,0,0.242584061187816,0,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0.564727018627814,0,0.224723484445085,0,0.641858054152187,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0.425208599930087,0.419317291016752,0.561643155732475,0.450530678524519,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,2.64342657158052,2.24203425192614,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0.557052284425868,0.294605907474837,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,1.15921234294021,0,0,0,0.453237370790265,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,1.66943437013739,1.14398982156026,3.71457501329565,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,35.5807127077371,19.3890132074163,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0.554128230968366,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0,0,0,0,0,0.537182889719687,0.112085143993527,0,0.862510299438069,0.898401253958239,0,0,0,0,0,11.2351053592077,8.97484377612075,21.5496066986738,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0.411362273086194,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,1.1490322207942,0.635020748171649,0,0.280797178113459,0,0,0,0.338583555603207,0,0.201799707191048,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,9.67387733671452,0,0,0,0.157611414598396,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.686520205190771,0,0.310874401165561,0,0.318593534327405,0,0,0,0.53168342911599,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,1.39991177098451,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.177404740325278,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0.369754010166788,0.154934401160603,0.426507697462265,0,0,0.200544447470142,1.08505435357926,0,0,0,0.436194716338694,0,0.242584061187816,0,0.411167888021826,0,0,0,0.236482229888585,0,0.645484683583826,0,0.564727018627814,0,0.224723484445085,0,0.641858054152187,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0.425208599930087,0.419317291016752,0.561643155732475,0.450530678524519,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,2.64342657158052,2.24203425192614,0,0.196709770113833,0,0,0,0.32592226663359,0,0,0.557052284425868,0.294605907474837,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,1.15921234294021,0,0,0,0.453237370790265,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,1.66943437013739,1.14398982156026,3.71457501329565,0,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,35.5807127077371,19.3890132074163,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0.554128230968366,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0,0,0,0,0,0.537182889719687,0.112085143993527,0,0.862510299438069,0.898401253958239,0,0,0,0,0,11.2351053592077,8.97484377612075,21.5496066986738,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0.411362273086194,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,1.1490322207942,0.635020748171649,0,0.280797178113459,0,0,0,0.338583555603207,0,0.201799707191048,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,9.67387733671452,0,0,0,0.157611414598396,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.686520205190771,0,0.310874401165561,0,0.318593534327405,0,0,0,0.53168342911599,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,1.39991177098451,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.177404740325278,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0.22910686854405,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@RRM2B | |short_description=p14@RRM2B | ||
}} | }} |
Latest revision as of 22:05, 24 September 2015
Short description: | p14@RRM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RRM2B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 177bp_to_ENST00000535248, uc003yko.2_5end |
EntrezGene: | RRM2B |
HGNC: | 17296 |
UniProt: | B4E2N4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.08e-37 | 8 |
neutrophil | 1.85e-36 | 3 |
plasmacytoid dendritic cell | 2.25e-35 | 3 |
blood cell | 3.10e-27 | 11 |
eosinophil | 3.89e-25 | 2 |
dendritic cell | 2.71e-17 | 10 |
hematopoietic stem cell | 5.24e-10 | 168 |
myeloid cell | 1.52e-09 | 108 |
common myeloid progenitor | 1.52e-09 | 108 |
hematopoietic cell | 2.08e-09 | 177 |
leukocyte | 5.80e-09 | 136 |
immature conventional dendritic cell | 7.93e-09 | 5 |
common dendritic progenitor | 7.93e-09 | 5 |
myeloid leukocyte | 2.39e-07 | 72 |
hematopoietic oligopotent progenitor cell | 2.50e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.50e-07 | 161 |
CD1a-positive Langerhans cell | 2.74e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.74e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.38e-13 | 1 |
cutaneous T cell lymphoma | 5.38e-13 | 1 |
mycosis fungoides | 5.38e-13 | 1 |