FFCP PHASE1:Hg19::chr4:120243266..120243277,-: Difference between revisions
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|id=chr4:120243266..120243277,-
|short_description=p2@FABP2
|description=CAGE_peak_2_at_FABP2_5end
|association_with_transcript=38bp_to_NM_000134,uc003icw.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2169 | |EntrezGene=2169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3556 | |HGNC=3556 | ||
|TSSclassifier=strong | |||
|UniProt=P12104 | |UniProt=P12104 | ||
|association_with_transcript=38bp_to_NM_000134,uc003icw.2_5end | |||
|cluster_id=chr4:120243266..120243277,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_FABP2_5end | |||
|id=chr4:120243266..120243277,- | |||
|ontology_enrichment_celltype=CL:0002563!2.57e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0002253;2.49e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.49e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.91e-19;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.95e-35!27;UBERON:0005409!7.69e-32!35;UBERON:0000059!1.55e-27!11;UBERON:0001155!1.02e-23!9;UBERON:0004907!6.70e-16!5;UBERON:0004921!1.03e-13!129;UBERON:0004185!1.03e-13!129;UBERON:0001007!1.46e-12!155;UBERON:0001555!1.46e-12!155;UBERON:0007026!1.46e-12!155;UBERON:0004119!2.79e-11!169;UBERON:0000925!2.79e-11!169;UBERON:0006595!2.79e-11!169;UBERON:0001154!7.50e-10!1;UBERON:0001153!7.50e-10!1;UBERON:0001831!1.06e-09!1;UBERON:0001567!1.06e-09!1;UBERON:0008801!1.06e-09!1;UBERON:0007029!1.15e-09!1;UBERON:0001052!1.84e-09!4;UBERON:0001242!2.57e-09!4;UBERON:0001262!2.57e-09!4;UBERON:0004786!2.57e-09!4;UBERON:0004808!2.57e-09!4;UBERON:0001277!2.57e-09!4;UBERON:0002108!2.62e-09!14;UBERON:0003350!1.27e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.27e-80;17!UBERON:0005409;3.77e-77;22!UBERON:0000059;3.00e-58;11!UBERON:0001155;7.64e-50;9!UBERON:0004921;3.22e-48;33!UBERON:0002108;1.79e-33;4!UBERON:0004907;1.35e-32;5!UBERON:0001555;2.02e-20;54!UBERON:0001154;3.91e-19;1!UBERON:0001153;3.91e-19;1!UBERON:0009854;3.91e-19;1!UBERON:0001052;8.49e-19;4!UBERON:0001007;2.82e-11;81!UBERON:0000922;2.94e-09;49!UBERON:0002114;2.32e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.08e-80,17;UBERON:0005409,3.21e-68,25;UBERON:0000059,2.85e-58,11;UBERON:0001155,7.64e-50,9;UBERON:0002108,1.79e-33,4;UBERON:0004907,1.28e-32,5;UBERON:0001154,3.91e-19,1;UBERON:0001153,3.91e-19,1;UBERON:0001045,3.91e-19,1;UBERON:0001052,8.11e-19,4;UBERON:0004921,1.57e-14,118;UBERON:0001007,1.01e-11,145;UBERON:0001555,1.01e-11,145;UBERON:0007026,1.01e-11,145;UBERON:0004119,1.45e-10,160;UBERON:0000925,1.45e-10,160;UBERON:0006595,1.45e-10,160;UBERON:0001046,4.29e-09,19;UBERON:0011216,6.17e-09,223;UBERON:0002114,2.32e-07,2 | |||
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|short_description=p2@FABP2 | |||
}} | }} |
Latest revision as of 22:41, 24 September 2015
Short description: | p2@FABP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FABP2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 38bp_to_NM_000134, uc003icw.2_5end |
EntrezGene: | FABP2 |
HGNC: | 3556 |
UniProt: | P12104 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.49e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.08e-80 | 17 |
gastrointestinal system | 3.21e-68 | 25 |
large intestine | 2.85e-58 | 11 |
colon | 7.64e-50 | 9 |
small intestine | 1.79e-33 | 4 |
lower digestive tract | 1.28e-32 | 5 |
vermiform appendix | 3.91e-19 | 1 |
caecum | 3.91e-19 | 1 |
midgut | 3.91e-19 | 1 |
rectum | 8.11e-19 | 4 |
subdivision of digestive tract | 1.57e-14 | 118 |
digestive system | 1.01e-11 | 145 |
digestive tract | 1.01e-11 | 145 |
primitive gut | 1.01e-11 | 145 |
endoderm-derived structure | 1.45e-10 | 160 |
endoderm | 1.45e-10 | 160 |
presumptive endoderm | 1.45e-10 | 160 |
hindgut | 4.29e-09 | 19 |
organ system subdivision | 6.17e-09 | 223 |
duodenum | 2.32e-07 | 2 |