FFCP PHASE1:Hg19::chr6:135516877..135516900,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:135516877..135516900,+
|short_description=p5@MYB
|description=CAGE_peak_5_at_MYB_5end
|association_with_transcript=0bp_to_ENST00000534736,uc003qge.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4602 | |EntrezGene=4602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7545 | |HGNC=7545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000534736,uc003qge.1_5end | |||
|cluster_id=chr6:135516877..135516900,+ | |||
|coexpression_cluster_id=C1114 | |||
|description=CAGE_peak_5_at_MYB_5end | |||
|id=chr6:135516877..135516900,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.60e-50!112;CL:0000049!2.60e-50!112;CL:0000037!8.86e-43!172;CL:0000566!8.86e-43!172;CL:0000988!1.18e-40!182;CL:0002032!1.46e-39!165;CL:0000837!1.46e-39!165;CL:0000766!6.32e-25!76;CL:0000839!1.96e-21!70;CL:0002057!3.24e-19!42;CL:0000860!5.33e-19!45;CL:0000738!1.41e-18!140;CL:0000557!7.96e-18!71;CL:0002194!1.86e-15!63;CL:0000576!1.86e-15!63;CL:0000040!1.86e-15!63;CL:0000559!1.86e-15!63;CL:0002031!3.96e-15!124;CL:0002009!9.54e-15!65;CL:0002087!4.87e-13!119;CL:0000134!2.18e-11!358;CL:0002320!8.25e-11!365;CL:0000219!8.95e-10!390;CL:0000094!2.00e-08!8;CL:0000081!9.18e-08!11;CL:0000048!2.49e-07!430;CL:0000034!5.42e-07!444;CL:0000723!5.48e-07!436;CL:0000775!5.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;6.46e-15;3!CL:0000763;1.12e-13;100!CL:0000764;3.42e-11;2!CL:0000558;3.42e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.32e-36,108;CL:0000049,1.32e-36,108;CL:0002032,1.85e-22,161;CL:0000837,1.85e-22,161;CL:0000037,2.98e-21,168;CL:0000988,7.66e-20,177;CL:0000775,5.87e-15,3;CL:0000764,3.34e-11,2;CL:0000765,3.34e-11,2;CL:0000050,3.34e-11,2;CL:0000038,3.34e-11,2;CL:0000558,3.34e-11,2;CL:0000547,3.34e-11,2;CL:0000549,3.34e-11,2;CL:0000550,3.34e-11,2;CL:0000552,3.34e-11,2;CL:0000766,4.60e-10,72;CL:0000839,1.10e-09,66 | |||
|ontology_enrichment_development_v019=CL:0000049;4.31e-11;108 | |||
|ontology_enrichment_disease=DOID:1240!2.54e-35!39;DOID:8692!5.67e-35!31;DOID:2531!2.39e-30!51;DOID:0060083!2.39e-30!51;DOID:0050686!1.37e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.66e-45;31!DOID:1240;2.84e-26;39!DOID:2531;7.19e-16;51!DOID:0060083;7.19e-16;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.67e-48,31;DOID:1240,3.54e-37,39;DOID:2531,1.87e-27,51;DOID:0060083,1.87e-27,51;DOID:0050686,1.23e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-29!102;UBERON:0003061!1.27e-29!102;UBERON:0002193!9.94e-26!112;UBERON:0000178!2.86e-17!15;UBERON:0000179!2.86e-17!15;UBERON:0000463!2.86e-17!15;UBERON:0002371!4.89e-16!80;UBERON:0001474!2.73e-14!86;UBERON:0004765!9.78e-12!101;UBERON:0001434!9.78e-12!101;UBERON:0002405!6.54e-11!115;UBERON:0002384!5.00e-10!375;UBERON:0003081!8.94e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.18e-20;15!UBERON:0000179;1.18e-20;15!UBERON:0000463;1.18e-20;15!UBERON:0002390;6.88e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.15e-20,15;UBERON:0000179,1.15e-20,15;UBERON:0000463,1.15e-20,15;UBERON:0002390,1.70e-15,98;UBERON:0003061,1.70e-15,98;UBERON:0002193,1.16e-13,108 | |||
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| ||
|short_description=p5@MYB | |||
}} | }} |
Latest revision as of 23:08, 24 September 2015
Short description: | p5@MYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYB_5end |
Coexpression cluster: | C1114_acute_myelodysplastic_biphenotypic_Whole_CD14_granulocyte_Reticulocytes |
Association with transcript: | 0bp_to_ENST00000534736, uc003qge.1_5end |
EntrezGene: | MYB |
HGNC: | 7545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.32e-36 | 108 |
common myeloid progenitor | 1.32e-36 | 108 |
hematopoietic oligopotent progenitor cell | 1.85e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-22 | 161 |
hematopoietic stem cell | 2.98e-21 | 168 |
hematopoietic cell | 7.66e-20 | 177 |
neutrophil | 5.87e-15 | 3 |
erythroid lineage cell | 3.34e-11 | 2 |
erythroblast | 3.34e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 3.34e-11 | 2 |
erythroid progenitor cell | 3.34e-11 | 2 |
reticulocyte | 3.34e-11 | 2 |
proerythroblast | 3.34e-11 | 2 |
basophilic erythroblast | 3.34e-11 | 2 |
polychromatophilic erythroblast | 3.34e-11 | 2 |
orthochromatic erythroblast | 3.34e-11 | 2 |
myeloid leukocyte | 4.60e-10 | 72 |
myeloid lineage restricted progenitor cell | 1.10e-09 | 66 |
Ontology term | p-value | n |
---|---|---|
blood | 1.15e-20 | 15 |
haemolymphatic fluid | 1.15e-20 | 15 |
organism substance | 1.15e-20 | 15 |
hematopoietic system | 1.70e-15 | 98 |
blood island | 1.70e-15 | 98 |
hemolymphoid system | 1.16e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.67e-48 | 31 |
leukemia | 3.54e-37 | 39 |
hematologic cancer | 1.87e-27 | 51 |
immune system cancer | 1.87e-27 | 51 |
organ system cancer | 1.23e-07 | 137 |