FFCP PHASE1:Hg19::chr5:137878846..137878872,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:137878846..137878872,- to FFCP PHASE1:Hg19::chr5:137878846..137878872,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2107 | |EntrezGene=2107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3477 | |HGNC=3477 | ||
|TSSclassifier=strong | |||
|UniProt=D6RCB3 | |UniProt=D6RCB3 | ||
|association_with_transcript=-6bp_to_ENST00000512198_5end | |||
|cluster_id=chr5:137878846..137878872,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_ETF1_5end | |||
|id=chr5:137878846..137878872,- | |||
|ontology_enrichment_celltype=CL:0000766!2.33e-29!76;CL:0000557!3.55e-26!71;CL:0000839!2.40e-24!70;CL:0002009!3.97e-24!65;CL:0000860!5.07e-23!45;CL:0002194!7.07e-23!63;CL:0000576!7.07e-23!63;CL:0000040!7.07e-23!63;CL:0000559!7.07e-23!63;CL:0002057!3.30e-22!42;CL:0000738!2.73e-19!140;CL:0000763!4.34e-17!112;CL:0000049!4.34e-17!112;CL:0002031!1.13e-15!124;CL:0002087!1.91e-14!119;CL:0000037!8.70e-14!172;CL:0000566!8.70e-14!172;CL:0002032!2.92e-12!165;CL:0000837!2.92e-12!165;CL:0000988!4.32e-12!182;CL:0000012!3.11e-11!682;CL:0000063!8.91e-11!578;CL:0000548!9.50e-11!679;CL:0000004!9.50e-11!679;CL:0000255!9.50e-11!679;CL:0000003!4.59e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-18;33!CL:0002057;1.87e-18;33!CL:0000473;1.04e-14;39!CL:0000234;1.04e-14;39!CL:0000576;1.90e-13;48!CL:0000766;4.00e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.99e-28,72;CL:0000557,4.44e-25,67;CL:0000839,3.01e-23,66;CL:0002009,4.77e-23,61;CL:0000860,3.30e-22,42;CL:0002057,3.30e-22,42;CL:0002194,8.42e-22,59;CL:0000576,8.42e-22,59;CL:0000040,8.42e-22,59;CL:0000559,8.42e-22,59;CL:0000473,6.96e-21,48;CL:0000234,6.96e-21,48;CL:0000738,3.20e-18,136;CL:0000763,4.87e-16,108;CL:0000049,4.87e-16,108;CL:0002031,1.15e-14,120;CL:0002087,1.84e-13,115;CL:0000037,7.13e-13,168;CL:0000988,1.14e-11,177;CL:0002032,2.18e-11,161;CL:0000837,2.18e-11,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.14e-16;42 | |||
|ontology_enrichment_disease=DOID:0050687!6.94e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.94e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.07e-21!80;UBERON:0001474!1.22e-20!86;UBERON:0004765!1.77e-18!101;UBERON:0001434!1.77e-18!101;UBERON:0002390!2.05e-17!102;UBERON:0003061!2.05e-17!102;UBERON:0002193!3.67e-13!112;UBERON:0002204!3.14e-12!167;UBERON:0002405!2.03e-11!115;UBERON:0000926!2.63e-08!448;UBERON:0004120!2.63e-08!448;UBERON:0006603!2.63e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.39e-20,76;UBERON:0001474,1.58e-19,82;UBERON:0004765,4.00e-18,90;UBERON:0001434,1.08e-16,100;UBERON:0002390,2.38e-16,98;UBERON:0003061,2.38e-16,98;UBERON:0002405,5.81e-13,93;UBERON:0002193,3.35e-12,108;UBERON:0002204,5.52e-11,167 | |||
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1998261 | ||
|short_description=p2@ETF1 | |||
}} | }} |
Latest revision as of 23:10, 24 September 2015
Short description: | p2@ETF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ETF1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -6bp_to_ENST00000512198_5end |
EntrezGene: | ETF1 |
HGNC: | 3477 |
UniProt: | D6RCB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.99e-28 | 72 |
granulocyte monocyte progenitor cell | 4.44e-25 | 67 |
myeloid lineage restricted progenitor cell | 3.01e-23 | 66 |
macrophage dendritic cell progenitor | 4.77e-23 | 61 |
classical monocyte | 3.30e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.30e-22 | 42 |
monopoietic cell | 8.42e-22 | 59 |
monocyte | 8.42e-22 | 59 |
monoblast | 8.42e-22 | 59 |
promonocyte | 8.42e-22 | 59 |
defensive cell | 6.96e-21 | 48 |
phagocyte | 6.96e-21 | 48 |
leukocyte | 3.20e-18 | 136 |
myeloid cell | 4.87e-16 | 108 |
common myeloid progenitor | 4.87e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 1.15e-14 | 120 |
nongranular leukocyte | 1.84e-13 | 115 |
hematopoietic stem cell | 7.13e-13 | 168 |
hematopoietic cell | 1.14e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.18e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-11 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.39e-20 | 76 |
bone element | 1.58e-19 | 82 |
skeletal element | 4.00e-18 | 90 |
skeletal system | 1.08e-16 | 100 |
hematopoietic system | 2.38e-16 | 98 |
blood island | 2.38e-16 | 98 |
immune system | 5.81e-13 | 93 |
hemolymphoid system | 3.35e-12 | 108 |
musculoskeletal system | 5.52e-11 | 167 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.94e-07 | 143 |