FFCP PHASE1:Hg19::chr14:62229047..62229058,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6617 | |EntrezGene=6617 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11134 | |HGNC=11134 | ||
|TSSclassifier=strong | |||
|UniProt=Q16533,B2RC42 | |UniProt=Q16533,B2RC42 | ||
|association_with_transcript=-16bp_to_ENST00000216294,NM_003082,uc001xft.2_5end | |association_with_transcript=-16bp_to_ENST00000216294,NM_003082,uc001xft.2_5end | ||
|cluster_id=chr14:62229047..62229058,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_3_at_SNAPC1_5end | |description=CAGE_peak_3_at_SNAPC1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!3.12e-09!42;CL:0000860!5.01e-09!45 | |ontology_enrichment_celltype=CL:0002057!3.12e-09!42;CL:0000860!5.01e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-31;33!CL:0002057;1.49e-31;33!CL:0000473;6.97e-24;39!CL:0000234;6.97e-24;39!CL:0000576;2.27e-14;48!CL:0000766;3.42e-09;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.49e-31;33!CL:0002057;1.49e-31;33!CL:0000473;6.97e-24;39!CL:0000234;6.97e-24;39!CL:0000576;2.27e-14;48!CL:0000766;3.42e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.14e-25,42;CL:0002057,1.14e-25,42;CL:0000473,3.35e-24,48;CL:0000234,3.35e-24,48;CL:0002194,3.32e-18,59;CL:0000576,3.32e-18,59;CL:0000040,3.32e-18,59;CL:0000559,3.32e-18,59;CL:0002009,1.96e-17,61;CL:0000839,1.03e-15,66;CL:0000557,2.13e-15,67;CL:0000766,5.80e-14,72;CL:0000763,1.71e-08,108;CL:0000049,1.71e-08,108;CL:0002087,7.23e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-17;42 | |ontology_enrichment_development_v019=CL:0002057;1.02e-17;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.62e-14,76;UBERON:0001474,3.32e-14,82;UBERON:0004765,8.87e-14,90;UBERON:0002405,3.59e-13,93;UBERON:0001434,8.41e-12,100;UBERON:0002193,1.62e-10,108;UBERON:0002390,7.02e-10,98;UBERON:0003061,7.02e-10,98 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,1.74467704820074,0,0,0,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.376627918784408,0.229240217243854,0.164201178899891,0.157421562627358,0.393364276848904,0.383829398097213,0.154816123316076,0,0.6024118375565,0,0.154934401160603,0,0.293600439334847,0,0.601633342410425,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,1.21292030593908,0.929716147622738,3.70051099219643,18.8920886246013,0.28769239232215,3.33008918487831,5.91205574721463,5.5159308917859,14.2006630388442,29.7938270507552,0.376484679085209,3.0019676506363,4.49446968890169,0.918251677112708,2.88836124368484,6.39337125799041,0,0.199463657621632,1.27867425159808,0.580418477257168,2.8369261234557,6.22822248995575,2.76373531782418,4.17186334736161,8.90474263290978,0,1.84138817993782,4.43047342417238,0,0,0.209658645508376,0,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0.541607727530031,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,1.15877215168659,0.795285947051099,0,0.189069634328136,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.649094787309367,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,2.00832367658802,0,0,0,0.367663080345869,0,0.267899184852239,0.673588117878509,1.0135033243499,1.53316637465883,0,0,0,0,0,0,0,0.529636723252875,0.573673241497627,0,0,2.1349799145941,0.24666754841716,0,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0,0.280901613404497,0.204154171254893,0,0.206651562351531,0,0.494533858557114,0,0,0,0.375355559615893,0.554128230968366,0.438977620880838,0.612975591598039,0.600952235626387,0.113432183160021,0.179389635688862,0,0.423863802319124,0,0.515262646192195,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.368199594569197,0.161646056818812,0.355009592516614,0,0.508681776931463,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0.580969714347592,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.842923450390509,0.723033089650446,0.661763836394364,0.871517776369625,1.18635309555548,1.07865046528132,1.37355025587742,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0.686271241194102,0,0,0.301586917234893,0.0925884451585296,0,0,7.21656710126366,0.231860809950154,0.234817388471643,0,0.462985512576611,2.09279567458058,0,0,0.492434012174795,0,0,2.81201501960331,0.16798212819886,0.708875486211932,0.179117045405697,0,0,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0.190493682876507,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,2.43247561282381,0.502257091432126,0,0.239624855491583,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0.828831026872071,0.24538298343828,0,0.271265023699736,0,0.356857977594324,0.157702415033935,0.468565659970853,0.601892199455438,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,0.496215615637554,0.61384789315225,0.561320188866147,0.768834895534206,0,0,0,0,0.177561725313127,0.246381468041427,0,0.116210378459959,0.362578348774867,0.40101294060657,0.644566922551274,0.574072240823034,0.546273504020151,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0.325378394664303,0.9273691048295,0.27470839445503,0.41254749960294,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.827019434907183,0,0.435050081742686,0.255679882248303,0,0.495854746082934,0.960950336825531,0.382838137483752,0.2023155617111,0.464845549297286,0.62962469366128,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0.38126038784765,0,0,0,0.78494864019923,0.719489830333259,0,0.353437207037059,0.202182481573316,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0,0.633322905892992,0.658589785919804,0,0,0.0962221127255121,0,0,1.41215701165169,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0.445234820091624,0.16480387422676,0,0.19924798825107,0.276283915531148,0,2.14764233254525,0.369254416383208,0,0.359473404589307,0.537063524026827,0.511572370226872,0.295930216910801,0,1.11136990144637,0,0.278304294485554,0,0.26042776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| ||
|short_description=p3@SNAPC1 | |short_description=p3@SNAPC1 | ||
}} | }} |
Latest revision as of 23:41, 24 September 2015
Short description: | p3@SNAPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SNAPC1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -16bp_to_ENST00000216294, NM_003082, uc001xft.2_5end |
EntrezGene: | SNAPC1 |
HGNC: | 11134 |
UniProt: | Q16533B2RC42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.14e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-25 | 42 |
defensive cell | 3.35e-24 | 48 |
phagocyte | 3.35e-24 | 48 |
monopoietic cell | 3.32e-18 | 59 |
monocyte | 3.32e-18 | 59 |
monoblast | 3.32e-18 | 59 |
promonocyte | 3.32e-18 | 59 |
macrophage dendritic cell progenitor | 1.96e-17 | 61 |
myeloid lineage restricted progenitor cell | 1.03e-15 | 66 |
granulocyte monocyte progenitor cell | 2.13e-15 | 67 |
myeloid leukocyte | 5.80e-14 | 72 |
myeloid cell | 1.71e-08 | 108 |
common myeloid progenitor | 1.71e-08 | 108 |
nongranular leukocyte | 7.23e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.62e-14 | 76 |
bone element | 3.32e-14 | 82 |
skeletal element | 8.87e-14 | 90 |
immune system | 3.59e-13 | 93 |
skeletal system | 8.41e-12 | 100 |
hemolymphoid system | 1.62e-10 | 108 |
hematopoietic system | 7.02e-10 | 98 |
blood island | 7.02e-10 | 98 |