FFCP PHASE1:Hg19::chr20:29978303..29978310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=245932 | |EntrezGene=245932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18099 | |HGNC=18099 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000376315_5end | |association_with_transcript=-17bp_to_ENST00000376315_5end | ||
|cluster_id=chr20:29978303..29978310,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_DEFB119_5end | |description=CAGE_peak_4_at_DEFB119_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.66e-21;2!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |ontology_enrichment_development_v019=UBERON:0007297;4.66e-21;2!UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.53e-44!2;UBERON:0002757!1.53e-44!2;UBERON:0010134!1.53e-44!2;UBERON:0002784!1.53e-44!2;UBERON:0005408!1.53e-44!2;UBERON:0001899!1.53e-44!2;UBERON:0001301!1.67e-23!1;UBERON:0003296!7.18e-23!4;UBERON:0010133!7.18e-23!4;UBERON:0003135!6.40e-19!11;UBERON:0001894!1.58e-13!7;UBERON:0006222!1.58e-13!7;UBERON:0000473!3.54e-12!8;UBERON:0003101!8.34e-10!22;UBERON:0000079!8.34e-10!22;UBERON:0006947!9.66e-09!3;UBERON:0004054!9.66e-09!3;UBERON:0007023!6.58e-07!115;UBERON:0005904!7.27e-07!4 | |ontology_enrichment_uberon=UBERON:0001905!1.53e-44!2;UBERON:0002757!1.53e-44!2;UBERON:0010134!1.53e-44!2;UBERON:0002784!1.53e-44!2;UBERON:0005408!1.53e-44!2;UBERON:0001899!1.53e-44!2;UBERON:0001301!1.67e-23!1;UBERON:0003296!7.18e-23!4;UBERON:0010133!7.18e-23!4;UBERON:0003135!6.40e-19!11;UBERON:0001894!1.58e-13!7;UBERON:0006222!1.58e-13!7;UBERON:0000473!3.54e-12!8;UBERON:0003101!8.34e-10!22;UBERON:0000079!8.34e-10!22;UBERON:0006947!9.66e-09!3;UBERON:0004054!9.66e-09!3;UBERON:0007023!6.58e-07!115;UBERON:0005904!7.27e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.48e-40;1!UBERON:0003135;3.85e-33;11!UBERON:0001905;6.30e-21;2!UBERON:0002757;6.30e-21;2!UBERON:0010134;6.30e-21;2!UBERON:0005408;6.30e-21;2!UBERON:0001899;6.30e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003101;4.60e-17;22!UBERON:0000079;4.60e-17;22!UBERON:0006947;1.60e-14;3!UBERON:0004054;1.60e-14;3!UBERON:0005904;3.10e-11;4!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0002784;3.60e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0001894;6.21e-07;7!UBERON:0003133;6.32e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0001301;1.48e-40;1!UBERON:0003135;3.85e-33;11!UBERON:0001905;6.30e-21;2!UBERON:0002757;6.30e-21;2!UBERON:0010134;6.30e-21;2!UBERON:0005408;6.30e-21;2!UBERON:0001899;6.30e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003101;4.60e-17;22!UBERON:0000079;4.60e-17;22!UBERON:0006947;1.60e-14;3!UBERON:0004054;1.60e-14;3!UBERON:0005904;3.10e-11;4!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0002784;3.60e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0001894;6.21e-07;7!UBERON:0003133;6.32e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.48e-40,1;UBERON:0003135,3.85e-33,11;UBERON:0000473,6.64e-21,8;UBERON:0001905,6.96e-21,2;UBERON:0002757,6.96e-21,2;UBERON:0010134,6.96e-21,2;UBERON:0005408,6.96e-21,2;UBERON:0001899,6.96e-21,2;UBERON:0003101,4.60e-17,22;UBERON:0000079,4.60e-17,22;UBERON:0006947,1.60e-14,3;UBERON:0004054,1.60e-14,3;UBERON:0005904,3.10e-11,4;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003133,2.89e-08,48;UBERON:0003886,1.99e-07,54;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7;UBERON:0005156,7.38e-07,59;UBERON:0000990,7.38e-07,59 | |||
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|short_description=p4@DEFB119 | |short_description=p4@DEFB119 | ||
}} | }} |
Latest revision as of 00:18, 25 September 2015
Short description: | p4@DEFB119 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DEFB119_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -17bp_to_ENST00000376315_5end |
EntrezGene: | DEFB119 |
HGNC: | 18099 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.48e-40 | 1 |
male reproductive organ | 3.85e-33 | 11 |
testis | 6.64e-21 | 8 |
pineal body | 6.96e-21 | 2 |
regional part of epithalamus | 6.96e-21 | 2 |
secretory circumventricular organ | 6.96e-21 | 2 |
circumventricular organ | 6.96e-21 | 2 |
epithalamus | 6.96e-21 | 2 |
male organism | 4.60e-17 | 22 |
male reproductive system | 4.60e-17 | 22 |
male genital duct | 1.60e-14 | 3 |
internal male genitalia | 1.60e-14 | 3 |
duct of male reproductive system | 3.10e-11 | 4 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
regional part of diencephalon | 3.79e-11 | 4 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
reproductive organ | 2.89e-08 | 48 |
body cavity precursor | 1.99e-07 | 54 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
reproductive structure | 7.38e-07 | 59 |
reproductive system | 7.38e-07 | 59 |