FFCP PHASE1:Hg19::chr2:224702270..224702326,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130340 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18971 | |||
|TSSclassifier=strong | |||
|UniProt=G5E966,F8W8K9,Q96PC3 | |||
|association_with_transcript=0bp_to_ENST00000334271,ENST00000396653,ENST00000396654,ENST00000423110,ENST00000443700,NM_001039569,uc002vnn.2,uc002vno.2,uc010fww.2,uc010fwx.1_5end | |||
|cluster_id=chr2:224702270..224702326,- | |||
|coexpression_cluster_id=C4194 | |||
|description=CAGE_peak_1_at_AP1S3_5end | |||
|id=chr2:224702270..224702326,- | |||
|ontology_enrichment_celltype=CL:0000066!9.66e-28!254;CL:0002076!8.10e-13!43;CL:0000223!4.32e-12!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.29e-11;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.79e-28,253;CL:0002076,8.28e-14,42;CL:0000223,7.16e-13,58 | |||
|ontology_enrichment_development_v019=CL:0000223;7.16e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.49e-16!106;DOID:0050687!6.13e-14!143;DOID:14566!5.03e-10!239;DOID:162!6.84e-10!235;DOID:299!5.24e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.69e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.45e-16,106;DOID:0050687,6.23e-14,143;DOID:14566,4.76e-10,239;DOID:162,6.47e-10,235;DOID:299,5.13e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.90e-09!169;UBERON:0000925!1.90e-09!169;UBERON:0006595!1.90e-09!169;UBERON:0005177!1.80e-08!107;UBERON:0000481!2.05e-08!347;UBERON:0000065!2.40e-08!53;UBERON:0005911!7.29e-08!82;UBERON:0001007!7.38e-08!155;UBERON:0001555!7.38e-08!155;UBERON:0007026!7.38e-08!155;UBERON:0006554!1.30e-07!44;UBERON:0001008!1.92e-07!45;UBERON:0001004!2.08e-07!72;UBERON:0004921!2.89e-07!129;UBERON:0004185!2.89e-07!129;UBERON:0008947!4.21e-07!38;UBERON:0003258!4.21e-07!38;UBERON:0001041!5.49e-07!98;UBERON:0000077!8.89e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.61e-07;30!UBERON:0001008;4.61e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.39e-09,160;UBERON:0000925,4.39e-09,160;UBERON:0006595,4.39e-09,160;UBERON:0005177,7.08e-09,101;UBERON:0000065,6.74e-08,54;UBERON:0005911,7.12e-08,82;UBERON:0001007,9.34e-08,145;UBERON:0001555,9.34e-08,145;UBERON:0007026,9.34e-08,145;UBERON:0004921,3.23e-07,118;UBERON:0008947,3.66e-07,38;UBERON:0003258,3.66e-07,38;UBERON:0001041,4.89e-07,87;UBERON:0001004,5.43e-07,74;UBERON:0006554,7.65e-07,47 | |||
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| |||
|short_description=p1@AP1S3 | |||
}} |
Latest revision as of 00:21, 25 September 2015
Short description: | p1@AP1S3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AP1S3_5end |
Coexpression cluster: | C4194_Mast_immature_epididymis_colon_Mesothelial_leiomyoblastoma_signet |
Association with transcript: | 0bp_to_ENST00000334271, ENST00000396653, ENST00000396654, ENST00000423110, ENST00000443700, NM_001039569, uc002vnn.2, uc002vno.2, uc010fww.2, uc010fwx.1_5end |
EntrezGene: | AP1S3 |
HGNC: | 18971 |
UniProt: | G5E966F8W8K9Q96PC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.79e-28 | 253 |
endo-epithelial cell | 8.28e-14 | 42 |
endodermal cell | 7.16e-13 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.39e-09 | 160 |
endoderm | 4.39e-09 | 160 |
presumptive endoderm | 4.39e-09 | 160 |
trunk region element | 7.08e-09 | 101 |
respiratory tract | 6.74e-08 | 54 |
endo-epithelium | 7.12e-08 | 82 |
digestive system | 9.34e-08 | 145 |
digestive tract | 9.34e-08 | 145 |
primitive gut | 9.34e-08 | 145 |
subdivision of digestive tract | 3.23e-07 | 118 |
respiratory primordium | 3.66e-07 | 38 |
endoderm of foregut | 3.66e-07 | 38 |
foregut | 4.89e-07 | 87 |
respiratory system | 5.43e-07 | 74 |
urinary system structure | 7.65e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.45e-16 | 106 |
cell type cancer | 6.23e-14 | 143 |
disease of cellular proliferation | 4.76e-10 | 239 |
cancer | 6.47e-10 | 235 |
adenocarcinoma | 5.13e-07 | 25 |