FFCP PHASE1:Hg19::chr17:43310611..43310637,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=752 | |EntrezGene=752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1212 | |HGNC=1212 | ||
|TSSclassifier=strong | |||
|UniProt=O95466 | |UniProt=O95466 | ||
|association_with_transcript=21bp_to_AF432213_5end | |association_with_transcript=21bp_to_AF432213_5end | ||
|cluster_id=chr17:43310611..43310637,+ | |||
|coexpression_cluster_id=C99 | |coexpression_cluster_id=C99 | ||
|description=CAGE_peak_21_at_FMNL1_5end | |description=CAGE_peak_21_at_FMNL1_5end | ||
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|ontology_enrichment_celltype=CL:0000738!1.21e-56!140;CL:0002087!3.03e-49!119;CL:0000037!4.48e-47!172;CL:0000566!4.48e-47!172;CL:0000988!1.38e-45!182;CL:0002057!2.08e-45!42;CL:0002032!1.14e-44!165;CL:0000837!1.14e-44!165;CL:0002031!1.67e-44!124;CL:0000860!1.82e-43!45;CL:0000766!5.30e-39!76;CL:0002009!3.68e-36!65;CL:0002194!4.64e-36!63;CL:0000576!4.64e-36!63;CL:0000040!4.64e-36!63;CL:0000559!4.64e-36!63;CL:0000557!7.28e-35!71;CL:0000839!5.63e-34!70;CL:0000763!2.10e-31!112;CL:0000049!2.10e-31!112;CL:0000542!1.19e-11!53;CL:0000051!1.19e-11!53;CL:0000838!4.93e-11!52;CL:0000084!3.39e-10!25;CL:0000827!3.39e-10!25;CL:0000134!4.04e-10!358;CL:0002320!1.79e-09!365;CL:0000791!1.97e-08!18;CL:0000789!1.97e-08!18;CL:0002420!1.97e-08!18;CL:0002419!1.97e-08!18;CL:0000790!1.97e-08!18;CL:0000990!3.50e-08!8;CL:0000451!3.62e-08!10;CL:0000219!5.25e-08!390 | |ontology_enrichment_celltype=CL:0000738!1.21e-56!140;CL:0002087!3.03e-49!119;CL:0000037!4.48e-47!172;CL:0000566!4.48e-47!172;CL:0000988!1.38e-45!182;CL:0002057!2.08e-45!42;CL:0002032!1.14e-44!165;CL:0000837!1.14e-44!165;CL:0002031!1.67e-44!124;CL:0000860!1.82e-43!45;CL:0000766!5.30e-39!76;CL:0002009!3.68e-36!65;CL:0002194!4.64e-36!63;CL:0000576!4.64e-36!63;CL:0000040!4.64e-36!63;CL:0000559!4.64e-36!63;CL:0000557!7.28e-35!71;CL:0000839!5.63e-34!70;CL:0000763!2.10e-31!112;CL:0000049!2.10e-31!112;CL:0000542!1.19e-11!53;CL:0000051!1.19e-11!53;CL:0000838!4.93e-11!52;CL:0000084!3.39e-10!25;CL:0000827!3.39e-10!25;CL:0000134!4.04e-10!358;CL:0002320!1.79e-09!365;CL:0000791!1.97e-08!18;CL:0000789!1.97e-08!18;CL:0002420!1.97e-08!18;CL:0002419!1.97e-08!18;CL:0000790!1.97e-08!18;CL:0000990!3.50e-08!8;CL:0000451!3.62e-08!10;CL:0000219!5.25e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-49;33!CL:0002057;1.08e-49;33!CL:0000473;6.31e-39;39!CL:0000234;6.31e-39;39!CL:0000576;2.22e-26;48!CL:0000775;1.81e-20;3!CL:0000766;4.92e-19;69!CL:0000763;1.41e-10;100!CL:0000738;3.44e-09;136!CL:0000094;5.42e-08;8!CL:0002087;9.27e-08;104 | |ontology_enrichment_celltype_v019=CL:0000860;1.08e-49;33!CL:0002057;1.08e-49;33!CL:0000473;6.31e-39;39!CL:0000234;6.31e-39;39!CL:0000576;2.22e-26;48!CL:0000775;1.81e-20;3!CL:0000766;4.92e-19;69!CL:0000763;1.41e-10;100!CL:0000738;3.44e-09;136!CL:0000094;5.42e-08;8!CL:0002087;9.27e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.79e-46,42;CL:0002057,1.79e-46,42;CL:0000473,6.17e-45,48;CL:0000234,6.17e-45,48;CL:0000766,7.18e-39,72;CL:0002194,3.42e-35,59;CL:0000576,3.42e-35,59;CL:0000040,3.42e-35,59;CL:0000559,3.42e-35,59;CL:0002009,6.20e-34,61;CL:0000839,4.06e-31,66;CL:0000557,1.33e-30,67;CL:0000738,2.72e-27,136;CL:0000763,4.20e-27,108;CL:0000049,4.20e-27,108;CL:0002087,9.86e-23,115;CL:0002032,2.48e-22,161;CL:0000837,2.48e-22,161;CL:0002031,1.30e-21,120;CL:0000037,3.32e-21,168;CL:0000775,9.05e-21,3;CL:0000988,6.91e-20,177;CL:0000094,4.22e-08,8;CL:0000134,1.74e-07,354;CL:0002320,3.04e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.71e-35;42!CL:0000049;5.80e-10;108 | |ontology_enrichment_development_v019=CL:0002057;3.71e-35;42!CL:0000049;5.80e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.07e-07;1!DOID:0060061;1.07e-07;1!DOID:8691;1.07e-07;1 | |ontology_enrichment_disease_v019=DOID:0060060;1.07e-07;1!DOID:0060061;1.07e-07;1!DOID:8691;1.07e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.10e-08,1;DOID:0060061,9.10e-08,1;DOID:8691,9.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.34e-43!102;UBERON:0003061!1.34e-43!102;UBERON:0002193!4.94e-39!112;UBERON:0002371!1.91e-30!80;UBERON:0001474!1.93e-28!86;UBERON:0002405!1.14e-23!115;UBERON:0004765!8.63e-22!101;UBERON:0001434!8.63e-22!101;UBERON:0003081!2.11e-12!216;UBERON:0000178!9.08e-10!15;UBERON:0000179!9.08e-10!15;UBERON:0000463!9.08e-10!15;UBERON:0002204!1.29e-09!167;UBERON:0002384!1.31e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!1.34e-43!102;UBERON:0003061!1.34e-43!102;UBERON:0002193!4.94e-39!112;UBERON:0002371!1.91e-30!80;UBERON:0001474!1.93e-28!86;UBERON:0002405!1.14e-23!115;UBERON:0004765!8.63e-22!101;UBERON:0001434!8.63e-22!101;UBERON:0003081!2.11e-12!216;UBERON:0000178!9.08e-10!15;UBERON:0000179!9.08e-10!15;UBERON:0000463!9.08e-10!15;UBERON:0002204!1.29e-09!167;UBERON:0002384!1.31e-08!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.40e-26,76;UBERON:0002390,1.00e-24,98;UBERON:0003061,1.00e-24,98;UBERON:0001474,2.21e-24,82;UBERON:0002193,4.51e-22,108;UBERON:0004765,6.68e-22,90;UBERON:0002405,4.43e-21,93;UBERON:0001434,2.36e-19,100;UBERON:0002204,4.15e-10,167;UBERON:0003081,7.74e-10,203;UBERON:0002384,6.52e-07,371 | |||
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|short_description=p21@FMNL1 | |short_description=p21@FMNL1 | ||
}} | }} |
Latest revision as of 01:26, 25 September 2015
Short description: | p21@FMNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_FMNL1_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | 21bp_to_AF432213_5end |
EntrezGene: | FMNL1 |
HGNC: | 1212 |
UniProt: | O95466 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.79e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-46 | 42 |
defensive cell | 6.17e-45 | 48 |
phagocyte | 6.17e-45 | 48 |
myeloid leukocyte | 7.18e-39 | 72 |
monopoietic cell | 3.42e-35 | 59 |
monocyte | 3.42e-35 | 59 |
monoblast | 3.42e-35 | 59 |
promonocyte | 3.42e-35 | 59 |
macrophage dendritic cell progenitor | 6.20e-34 | 61 |
myeloid lineage restricted progenitor cell | 4.06e-31 | 66 |
granulocyte monocyte progenitor cell | 1.33e-30 | 67 |
leukocyte | 2.72e-27 | 136 |
myeloid cell | 4.20e-27 | 108 |
common myeloid progenitor | 4.20e-27 | 108 |
nongranular leukocyte | 9.86e-23 | 115 |
hematopoietic oligopotent progenitor cell | 2.48e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.48e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 1.30e-21 | 120 |
hematopoietic stem cell | 3.32e-21 | 168 |
neutrophil | 9.05e-21 | 3 |
hematopoietic cell | 6.91e-20 | 177 |
granulocyte | 4.22e-08 | 8 |
mesenchymal cell | 1.74e-07 | 354 |
connective tissue cell | 3.04e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.40e-26 | 76 |
hematopoietic system | 1.00e-24 | 98 |
blood island | 1.00e-24 | 98 |
bone element | 2.21e-24 | 82 |
hemolymphoid system | 4.51e-22 | 108 |
skeletal element | 6.68e-22 | 90 |
immune system | 4.43e-21 | 93 |
skeletal system | 2.36e-19 | 100 |
musculoskeletal system | 4.15e-10 | 167 |
lateral plate mesoderm | 7.74e-10 | 203 |
connective tissue | 6.52e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.10e-08 | 1 |
cutaneous T cell lymphoma | 9.10e-08 | 1 |
mycosis fungoides | 9.10e-08 | 1 |