FFCP PHASE1:Hg19::chr14:65170966..65170990,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20364 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-163bp_to_ENST00000247226_5end | |||
|cluster_id=chr14:65170966..65170990,+ | |||
|coexpression_cluster_id=C3444 | |||
|description=CAGE_peak_6_at_PLEKHG3_5end | |||
|id=chr14:65170966..65170990,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.74e-13!172;CL:0000566!4.74e-13!172;CL:0002032!3.45e-12!165;CL:0000837!3.45e-12!165;CL:0000791!9.66e-12!18;CL:0000789!9.66e-12!18;CL:0002420!9.66e-12!18;CL:0002419!9.66e-12!18;CL:0000790!9.66e-12!18;CL:0000988!2.90e-11!182;CL:0000738!1.34e-10!140;CL:0000625!6.88e-09!11;CL:0000094!3.15e-08!8;CL:0000763!4.46e-08!112;CL:0000049!4.46e-08!112;CL:0002087!9.58e-08!119;CL:0002393!2.64e-07!9;CL:0002397!2.64e-07!9;CL:0000084!3.46e-07!25;CL:0000827!3.46e-07!25;CL:0002031!8.75e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.24e-24;8!CL:0000791;3.11e-21;18!CL:0000789;3.11e-21;18!CL:0002419;3.11e-21;18!CL:0000625;6.58e-18;11!CL:0000081;1.18e-17;11!CL:0000084;9.75e-15;25!CL:0000623;2.78e-14;3!CL:0000775;5.94e-14;3!CL:0000226;5.00e-13;3!CL:0000842;5.00e-13;3!CL:0000767;1.60e-12;3!CL:0002393;7.01e-07;6!CL:0002397;7.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,6.32e-25,8;CL:0000791,2.45e-21,18;CL:0000789,2.45e-21,18;CL:0002420,2.45e-21,18;CL:0002419,2.45e-21,18;CL:0000790,2.45e-21,18;CL:0000738,3.31e-20,136;CL:0000625,5.31e-18,11;CL:0000081,7.25e-18,11;CL:0000037,1.19e-17,168;CL:0000988,2.21e-16,177;CL:0000084,8.25e-15,25;CL:0000827,8.25e-15,25;CL:0002032,1.21e-14,161;CL:0000837,1.21e-14,161;CL:0000623,2.98e-14,3;CL:0000825,2.98e-14,3;CL:0000775,6.22e-14,3;CL:0000226,5.34e-13,3;CL:0000842,5.34e-13,3;CL:0000767,6.04e-13,3;CL:0000838,6.14e-11,52;CL:0002087,7.83e-11,115;CL:0000542,1.12e-10,53;CL:0000051,1.12e-10,53;CL:0002031,5.70e-09,120;CL:0000766,6.81e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000790;3.11e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.83e-11!15;UBERON:0000179!1.83e-11!15;UBERON:0000463!1.83e-11!15;UBERON:0002390!1.19e-07!102;UBERON:0003061!1.19e-07!102;UBERON:0002193!5.55e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.55e-32;15!UBERON:0000179;4.55e-32;15!UBERON:0000463;4.55e-32;15!UBERON:0002390;2.71e-13;32!UBERON:0002193;1.49e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.03e-32,15;UBERON:0000179,5.03e-32,15;UBERON:0000463,5.03e-32,15;UBERON:0002390,1.49e-10,98;UBERON:0003061,1.49e-10,98;UBERON:0002193,3.41e-09,108 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.0787107813136792,1.96682138424452,1.53531759238885,1.85779347979291,0,0.30120591877825,0,0,0,0,1.66198622559563,2.4065333696417,4.99125002646459,0.223915474239924,0,0.257575567634187,1.01778767145695,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.564727018627814,0.545812300115692,0,0,0,0,0,0.598390972864896,0,0,0,1.24564449799115,0,0,0.217188844705117,0,0,0,0.211255286311942,0.637812899895131,0.209658645508376,0.561643155732475,0.450530678524519,0.48217676009124,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,2.75107533924415,1.02800749499755,0.334372990781356,0.32592226663359,0,0,2.45103005147382,0,0.443067789167242,0,2.81800903396485,1.69077151827842,1.47994114143309,1.38175008892924,0.579606171470105,0,0,0,4.30575502250752,1.91610246800961,1.03088233644789,0.506039384039006,0.318565414324097,0,0.950452044448374,1.35517607169996,1.53583933385302,3.74792179657038,1.89421801635213,0,3.62892137804518,8.02320587350522,2.02754165435919,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0.286804595389004,0.365921118388786,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,1.14462964217194,1.03664057770386,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12279976525011,4.31255149719035,6.54549485026717,0,0,0,0,0,2.24702107184155,5.9832291840805,4.97298616123243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.72571360654893,4.05564719653088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,2.53723804616085,0.764637207142375,5.69647187174163,2.85878130549347,3.29089818468955,1.29694662238543,2.70015718619057,4.75875105776562,0,0,0,0,0,0,0,1.39705560002972,0.5745161103971,0.423347165447766,0,0.280797178113459,0,0.47003968731907,0,0,0.963528450622197,0.403599414382095,0.425846237690326,0,0,0.223676107892416,0.166849141711909,0.390776190804081,0,0,0,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0.246169610922139,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.179515288819544,0,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0.831058409500782,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.426905989478705,0,0.288180834308212,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0.164831716762333,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0.213383459388282,0,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.131545547125698,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0.235676547101626,0.196308467114945,0,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@PLEKHG3 | |||
}} |
Latest revision as of 01:58, 25 September 2015
Short description: | p6@PLEKHG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLEKHG3_5end |
Coexpression cluster: | C3444_Neutrophils_CD8_Natural_Whole_CD4_Eosinophils_Peripheral |
Association with transcript: | -163bp_to_ENST00000247226_5end |
EntrezGene: | PLEKHG3 |
HGNC: | 20364 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 6.32e-25 | 8 |
mature alpha-beta T cell | 2.45e-21 | 18 |
alpha-beta T cell | 2.45e-21 | 18 |
immature T cell | 2.45e-21 | 18 |
mature T cell | 2.45e-21 | 18 |
immature alpha-beta T cell | 2.45e-21 | 18 |
leukocyte | 3.31e-20 | 136 |
CD8-positive, alpha-beta T cell | 5.31e-18 | 11 |
blood cell | 7.25e-18 | 11 |
hematopoietic stem cell | 1.19e-17 | 168 |
hematopoietic cell | 2.21e-16 | 177 |
T cell | 8.25e-15 | 25 |
pro-T cell | 8.25e-15 | 25 |
hematopoietic oligopotent progenitor cell | 1.21e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-14 | 161 |
natural killer cell | 2.98e-14 | 3 |
pro-NK cell | 2.98e-14 | 3 |
neutrophil | 6.22e-14 | 3 |
single nucleate cell | 5.34e-13 | 3 |
mononuclear cell | 5.34e-13 | 3 |
basophil | 6.04e-13 | 3 |
lymphoid lineage restricted progenitor cell | 6.14e-11 | 52 |
nongranular leukocyte | 7.83e-11 | 115 |
lymphocyte | 1.12e-10 | 53 |
common lymphoid progenitor | 1.12e-10 | 53 |
hematopoietic lineage restricted progenitor cell | 5.70e-09 | 120 |
myeloid leukocyte | 6.81e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 5.03e-32 | 15 |
haemolymphatic fluid | 5.03e-32 | 15 |
organism substance | 5.03e-32 | 15 |
hematopoietic system | 1.49e-10 | 98 |
blood island | 1.49e-10 | 98 |
hemolymphoid system | 3.41e-09 | 108 |