FFCP PHASE1:Hg19::chr11:9286627..9286657,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19344 | |||
|TSSclassifier=strong | |||
|UniProt=E9PS91,E9PIS3 | |||
|association_with_transcript=0bp_to_ENST00000530044,ENST00000530780_5end | |||
|cluster_id=chr11:9286627..9286657,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_DENND5A_5end | |||
|id=chr11:9286627..9286657,- | |||
|ontology_enrichment_celltype=CL:0000766!1.60e-18!76;CL:0002057!1.86e-18!42;CL:0000860!5.48e-17!45;CL:0000557!6.76e-14!71;CL:0000839!1.09e-13!70;CL:0002194!4.07e-13!63;CL:0000576!4.07e-13!63;CL:0000040!4.07e-13!63;CL:0000559!4.07e-13!63;CL:0002009!1.02e-12!65;CL:0000763!1.46e-07!112;CL:0000049!1.46e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.14e-24;33!CL:0002057;2.14e-24;33!CL:0000473;1.80e-18;39!CL:0000234;1.80e-18;39!CL:0000766;2.19e-14;69!CL:0000576;1.00e-13;48!CL:0000094;3.38e-08;8!CL:0000775;7.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.94e-27,72;CL:0000860,1.13e-25,42;CL:0002057,1.13e-25,42;CL:0000473,5.72e-25,48;CL:0000234,5.72e-25,48;CL:0000839,1.71e-20,66;CL:0000557,4.96e-20,67;CL:0002194,1.96e-19,59;CL:0000576,1.96e-19,59;CL:0000040,1.96e-19,59;CL:0000559,1.96e-19,59;CL:0002009,1.74e-18,61;CL:0000763,3.17e-14,108;CL:0000049,3.17e-14,108;CL:0000738,2.13e-10,136;CL:0000094,4.68e-08,8;CL:0002031,1.30e-07,120;CL:0002087,5.10e-07,115;CL:0000775,7.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.55e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.46e-13!80;UBERON:0002390!5.98e-12!102;UBERON:0003061!5.98e-12!102;UBERON:0002193!1.78e-11!112;UBERON:0001474!3.03e-11!86;UBERON:0004765!4.62e-10!101;UBERON:0001434!4.62e-10!101;UBERON:0001049!1.03e-09!57;UBERON:0005068!1.03e-09!57;UBERON:0006241!1.03e-09!57;UBERON:0007135!1.03e-09!57;UBERON:0002204!1.28e-09!167;UBERON:0007023!3.48e-08!115;UBERON:0002405!4.12e-08!115;UBERON:0003081!4.18e-08!216;UBERON:0001017!1.23e-07!82;UBERON:0002616!1.76e-07!59;UBERON:0000955!6.00e-07!69;UBERON:0006238!6.00e-07!69;UBERON:0003080!9.42e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.13e-19,76;UBERON:0001474,9.21e-17,82;UBERON:0004765,2.48e-14,90;UBERON:0002390,2.63e-14,98;UBERON:0003061,2.63e-14,98;UBERON:0002405,1.55e-13,93;UBERON:0001434,1.06e-12,100;UBERON:0002193,5.50e-12,108 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.422863212287913,1.0007329835313,1.78784437770915,1.74467704820074,0,0,0.522371256399677,0,0,0,0.263766978228454,0.37129905888014,0.662794751455832,0,0.602694528023977,0.730310090387373,0.975865597581014,0.61560529038394,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,1.18009283054671,0.383829398097213,0.77408061658038,0,0,0,0,0,0.293600439334847,6.09394949385065,5.21415563422368,4.12320654360118,0,0,0.257575567634187,2.18097358169347,0.755751887377619,1.21292030593908,1.62700325833979,1.23350366406548,1.54853185447552,2.3015391385772,1.7931249457037,1.89185783910868,6.89491361473237,4.51839278508678,2.70852973188684,1.69418105588344,2.18324920046277,0.674170453335254,4.89734227793444,2.56743221660875,5.11469700639233,0.659702600373432,2.59302754908121,0,6.67481248845743,4.53908179752912,8.71951148593805,1.7587406567972,0.521482918420201,0.868755378820466,3.63239701580021,3.68277635987565,4.74693581161327,0.845021145247767,0.425208599930087,0.209658645508376,0.898629049171961,1.05123824989054,0.803627933485401,0.570025487482497,0.99458338599545,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0.382273228125229,3.96513985737078,4.48406850385229,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0.443067789167242,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0.68725489096526,0,0,0.651083453856419,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0.534880391567015,0.289648807765598,0,0.670700859703636,0.255725123687061,1.0843174571537,2.00535164254356,0.724232594804119,0,2.91980922181582,0.0945348171640679,0.221729397462564,0.175669571386252,0.654895377488563,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0.715471872916026,0,0.371457501329565,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0.71153252537342,0.33472061276467,0.805658634218294,0,0.976248230192678,0,0,0.267899184852239,0,0.337834441449967,0,0,0.549605231791222,3.9534125230819,15.511210565933,0,2.48485975847659,0.506522046658319,1.19168262731897,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.877955241761676,1.22595118319608,0.751190294532984,0.453728732640084,1.4351170855109,0.427114777637135,0.635795703478686,0,0.309157587715317,0.515281080091258,0.744467425326359,1.0126579934476,1.46155507741798,0.757301322732344,1.65689817556139,1.45481451136931,0.710019185033229,0.503760491138201,0.339121184620975,0,0,0.573609190778008,0,0,0,0.414644220061482,0,0,0,1.28648187638577,0,0.464367928031979,1.44375896333917,0.118306800039844,0,0.482022059766964,0.55146986366197,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,1.2347220339942,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0.577465791044295,0.925971025153221,0.380508304469197,0.790204397959275,0.858486162094873,0.246217006087397,0,0.297262324577456,0,0,0.283550194484773,0,0,0,12.8092441852945,0.528290604079356,1.86595303986695,0.864719720501769,1.00993946741104,0,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0.336393253036082,0.87192013766656,0.2933531432838,0.258543431515556,0,0,0.797814349754612,0,0.257207374262142,1.41849132023278,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0.710783897485092,0,0.904318131178758,0,0.299918973546171,2.43247561282381,1.50677127429638,0,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0.895304816199478,0,1.37921532141349,0,0.256686072559497,0.254094624222463,1.30139853857622,0,0,0.637938751653163,8.98808428736619,11.966458368161,7.45947924184864,0.12269149171914,0,0.813795071099207,2.28767947683888,1.07057393278297,1.26161932027148,1.28855556491985,0.300946099727719,0,0,0,0.553107505625109,0.521301686808497,0.195801157462741,0.343143423810856,0.620304078368662,1.72571360654893,0.853820462427555,0,0,0.30239029332968,1.24053903909388,1.07423381301644,0.561320188866147,1.28139149255701,1.53512174720011,1.44768529029247,0,0.154209693802656,0.710246901252508,0.246381468041427,0.519254429183621,0.813472649219715,0.120859449591622,0.200506470303285,0,0.34444334449382,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0.422206515571503,0,0.680374821106063,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,0,0.462145851343933,0,0.551346289938122,0.429680979473094,0.435050081742686,0.426133137080504,0.356128142586949,0,0.192190067365106,0.127612712494584,0,0,0.62962469366128,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073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| |||
|short_description=p5@DENND5A | |||
}} |
Latest revision as of 02:06, 25 September 2015
Short description: | p5@DENND5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DENND5A_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000530044, ENST00000530780_5end |
EntrezGene: | DENND5A |
HGNC: | 19344 |
UniProt: | E9PS91E9PIS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.94e-27 | 72 |
classical monocyte | 1.13e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-25 | 42 |
defensive cell | 5.72e-25 | 48 |
phagocyte | 5.72e-25 | 48 |
myeloid lineage restricted progenitor cell | 1.71e-20 | 66 |
granulocyte monocyte progenitor cell | 4.96e-20 | 67 |
monopoietic cell | 1.96e-19 | 59 |
monocyte | 1.96e-19 | 59 |
monoblast | 1.96e-19 | 59 |
promonocyte | 1.96e-19 | 59 |
macrophage dendritic cell progenitor | 1.74e-18 | 61 |
myeloid cell | 3.17e-14 | 108 |
common myeloid progenitor | 3.17e-14 | 108 |
leukocyte | 2.13e-10 | 136 |
granulocyte | 4.68e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 1.30e-07 | 120 |
nongranular leukocyte | 5.10e-07 | 115 |
neutrophil | 7.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.13e-19 | 76 |
bone element | 9.21e-17 | 82 |
skeletal element | 2.48e-14 | 90 |
hematopoietic system | 2.63e-14 | 98 |
blood island | 2.63e-14 | 98 |
immune system | 1.55e-13 | 93 |
skeletal system | 1.06e-12 | 100 |
hemolymphoid system | 5.50e-12 | 108 |