FFCP PHASE1:Hg19::chr14:65346679..65346690,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:65346679..65346690,- to FFCP PHASE1:Hg19::chr14:65346679..65346690,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6710 | |EntrezGene=6710 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11274 | |HGNC=11274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-78bp_to_ENST00000556626,uc001xhs.2,uc001xhu.2_5end | |||
|cluster_id=chr14:65346679..65346690,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_7_at_SPTB_5end | |||
|id=chr14:65346679..65346690,- | |||
|ontology_enrichment_celltype=CL:0002274!3.82e-11!5;CL:0000457!3.82e-11!5;CL:0002191!3.82e-11!5;CL:0000097!3.82e-11!5;CL:0000831!3.82e-11!5;CL:0002028!3.82e-11!5;CL:0000163!2.41e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.01e-16;2!CL:0000558;1.01e-16;2!CL:0000322;1.14e-10;3!CL:0002553;1.27e-08;1!CL:0000097;9.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.01e-16,2;CL:0000765,1.01e-16,2;CL:0000050,1.01e-16,2;CL:0000038,1.01e-16,2;CL:0000558,1.01e-16,2;CL:0000547,1.01e-16,2;CL:0000549,1.01e-16,2;CL:0000550,1.01e-16,2;CL:0000552,1.01e-16,2;CL:0000322,2.26e-10,3;CL:0002553,9.74e-09,1;CL:0000097,9.45e-07,5;CL:0002028,9.45e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.27e-08;1 | |||
|ontology_enrichment_disease=DOID:1036!9.51e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.54e-15;2!DOID:3908;9.73e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.33e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-36!115;UBERON:0001049!2.39e-24!57;UBERON:0005068!2.39e-24!57;UBERON:0006241!2.39e-24!57;UBERON:0007135!2.39e-24!57;UBERON:0002616!2.22e-21!59;UBERON:0000955!1.46e-19!69;UBERON:0006238!1.46e-19!69;UBERON:0001017!2.76e-19!82;UBERON:0005743!3.24e-19!86;UBERON:0000073!1.52e-16!94;UBERON:0001016!1.52e-16!94;UBERON:0002780!9.15e-16!41;UBERON:0001890!9.15e-16!41;UBERON:0006240!9.15e-16!41;UBERON:0003080!2.87e-15!42;UBERON:0003075!1.63e-14!86;UBERON:0007284!1.63e-14!86;UBERON:0000153!1.89e-14!129;UBERON:0007811!1.89e-14!129;UBERON:0001893!4.03e-14!34;UBERON:0002346!1.63e-13!90;UBERON:0001869!1.90e-13!32;UBERON:0002791!7.71e-13!33;UBERON:0000033!1.35e-12!123;UBERON:0002020!1.89e-12!34;UBERON:0003528!1.89e-12!34;UBERON:0004733!4.91e-11!12;UBERON:0002028!4.91e-11!12;UBERON:0007277!4.91e-11!12;UBERON:0003076!8.68e-11!15;UBERON:0003057!8.68e-11!15;UBERON:0002420!9.57e-11!9;UBERON:0007245!9.57e-11!9;UBERON:0010009!9.57e-11!9;UBERON:0010011!9.57e-11!9;UBERON:0000454!9.57e-11!9;UBERON:0004732!4.62e-10!13;UBERON:0003056!5.92e-10!61;UBERON:0000369!4.10e-09!4;UBERON:0002435!4.10e-09!4;UBERON:0000204!4.10e-09!4;UBERON:0010082!4.10e-09!4;UBERON:0001950!4.33e-09!20;UBERON:0004121!3.95e-08!169;UBERON:0002619!4.21e-08!22;UBERON:0002308!4.53e-08!9;UBERON:0000125!4.53e-08!9;UBERON:0000924!9.67e-08!173;UBERON:0006601!9.67e-08!173;UBERON:0009663!1.86e-07!7;UBERON:0005383!2.31e-07!3;UBERON:0005382!2.31e-07!3;UBERON:0000025!2.42e-07!194;UBERON:0001896!3.55e-07!3;UBERON:0005290!3.55e-07!3;UBERON:0010096!3.55e-07!3;UBERON:0000956!6.50e-07!25;UBERON:0000203!6.50e-07!25;UBERON:0002298!6.91e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.54e-15;2!UBERON:0002173;1.54e-15;2!UBERON:0002186;1.54e-15;2!UBERON:0001723;4.42e-11;3!UBERON:0001033;4.42e-11;3!UBERON:0004821;1.14e-10;3!UBERON:0007499;1.14e-10;3!UBERON:0003215;1.14e-10;3!UBERON:0010368;1.14e-10;3!UBERON:0009911;1.14e-10;3!UBERON:0002299;1.14e-10;3!UBERON:0006524;1.14e-10;3!UBERON:0008874;1.14e-10;3!UBERON:0002169;1.14e-10;3!UBERON:0004894;1.14e-10;3!UBERON:0002426;5.07e-09;1!UBERON:0003831;5.07e-09;1!UBERON:0003898;5.07e-09;1!UBERON:0004830;5.07e-09;1!UBERON:0003830;5.07e-09;1!UBERON:0005175;5.07e-09;1!UBERON:0001774;5.07e-09;1!UBERON:0001103;5.07e-09;1!UBERON:0007029;1.27e-08;1!UBERON:0001874;1.27e-08;1!UBERON:0000989;1.27e-08;1!UBERON:0008811;1.27e-08;1!UBERON:0009856;3.22e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.33e-15,2;UBERON:0002173,4.33e-15,2;UBERON:0002186,4.33e-15,2;UBERON:0001723,4.21e-11,3;UBERON:0001033,4.21e-11,3;UBERON:0010056,4.21e-11,3;UBERON:0004821,2.26e-10,3;UBERON:0003215,2.26e-10,3;UBERON:0010368,2.26e-10,3;UBERON:0009911,2.26e-10,3;UBERON:0002299,2.26e-10,3;UBERON:0006524,2.26e-10,3;UBERON:0008874,2.26e-10,3;UBERON:0002169,2.26e-10,3;UBERON:0004894,2.26e-10,3;UBERON:0002426,4.89e-09,1;UBERON:0003831,4.89e-09,1;UBERON:0003898,4.89e-09,1;UBERON:0004830,4.89e-09,1;UBERON:0003830,4.89e-09,1;UBERON:0005175,4.89e-09,1;UBERON:0001774,4.89e-09,1;UBERON:0001103,4.89e-09,1;UBERON:0010084,4.89e-09,1;UBERON:0007029,7.18e-09,1;UBERON:0000989,1.22e-08,1;UBERON:0008811,1.22e-08,1;UBERON:0006258,1.22e-08,1;UBERON:0005876,1.22e-08,1;UBERON:0004874,1.22e-08,1;UBERON:0001874,1.53e-08,1;UBERON:0007023,2.84e-07,114 | |||
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| ||
|short_description=p7@SPTB | |||
}} | }} |
Latest revision as of 02:23, 25 September 2015
Short description: | p7@SPTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPTB_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -78bp_to_ENST00000556626, uc001xhs.2, uc001xhu.2_5end |
EntrezGene: | SPTB |
HGNC: | 11274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.01e-16 | 2 |
erythroblast | 1.01e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 1.01e-16 | 2 |
erythroid progenitor cell | 1.01e-16 | 2 |
reticulocyte | 1.01e-16 | 2 |
proerythroblast | 1.01e-16 | 2 |
basophilic erythroblast | 1.01e-16 | 2 |
polychromatophilic erythroblast | 1.01e-16 | 2 |
orthochromatic erythroblast | 1.01e-16 | 2 |
pneumocyte | 2.26e-10 | 3 |
lung fibroblast | 9.74e-09 | 1 |
mast cell | 9.45e-07 | 5 |
basophil mast progenitor cell | 9.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.33e-15 | 2 |
alveolar duct | 4.33e-15 | 2 |
bronchiole | 4.33e-15 | 2 |
tongue | 4.21e-11 | 3 |
gustatory system | 4.21e-11 | 3 |
future tongue | 4.21e-11 | 3 |
pulmonary alveolus epithelium | 2.26e-10 | 3 |
alveolus | 2.26e-10 | 3 |
pulmonary lobule | 2.26e-10 | 3 |
lobule | 2.26e-10 | 3 |
alveolus of lung | 2.26e-10 | 3 |
alveolar system | 2.26e-10 | 3 |
pulmonary acinus | 2.26e-10 | 3 |
alveolar sac | 2.26e-10 | 3 |
alveolar wall | 2.26e-10 | 3 |
chest muscle | 4.89e-09 | 1 |
respiratory system muscle | 4.89e-09 | 1 |
skeletal muscle of trunk | 4.89e-09 | 1 |
respiratory system skeletal muscle | 4.89e-09 | 1 |
thoracic segment muscle | 4.89e-09 | 1 |
chest organ | 4.89e-09 | 1 |
muscle of trunk | 4.89e-09 | 1 |
diaphragm | 4.89e-09 | 1 |
future diaphragm | 4.89e-09 | 1 |
surface | 7.18e-09 | 1 |
penis | 1.22e-08 | 1 |
intromittent organ | 1.22e-08 | 1 |
lateral plate mesenchyme | 1.22e-08 | 1 |
undifferentiated genital tubercle | 1.22e-08 | 1 |
somatopleure | 1.22e-08 | 1 |
putamen | 1.53e-08 | 1 |
adult organism | 2.84e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.33e-15 | 2 |