FFCP PHASE1:Hg19::chr11:93862422..93862441,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:93862422..93862441,+ to FFCP PHASE1:Hg19::chr11:93862422..93862441,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24145 | |EntrezGene=24145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8599 | |HGNC=8599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=327bp_to_ENST00000436171_5end | |||
|cluster_id=chr11:93862422..93862441,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_PANX1_5end | |||
|id=chr11:93862422..93862441,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.53e-19!42;CL:0000860!6.27e-17!45;CL:0002194!2.08e-15!63;CL:0000576!2.08e-15!63;CL:0000040!2.08e-15!63;CL:0000559!2.08e-15!63;CL:0000557!1.34e-14!71;CL:0002009!2.64e-14!65;CL:0000839!4.89e-14!70;CL:0000766!1.01e-12!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.39e-51;33!CL:0002057;1.39e-51;33!CL:0000473;7.00e-37;39!CL:0000234;7.00e-37;39!CL:0000576;2.39e-30;48!CL:0000766;1.32e-13;69!CL:0000763;2.77e-08;100!CL:0002087;2.82e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.00e-44,42;CL:0002057,4.00e-44,42;CL:0000473,6.50e-38,48;CL:0000234,6.50e-38,48;CL:0002194,3.04e-35,59;CL:0000576,3.04e-35,59;CL:0000040,3.04e-35,59;CL:0000559,3.04e-35,59;CL:0002009,6.52e-34,61;CL:0000557,3.75e-33,67;CL:0000839,6.21e-31,66;CL:0000766,6.74e-28,72;CL:0000763,2.31e-18,108;CL:0000049,2.31e-18,108;CL:0002087,2.26e-15,115;CL:0002031,1.69e-14,120;CL:0000738,3.87e-12,136;CL:0002032,2.07e-10,161;CL:0000837,2.07e-10,161;CL:0000037,9.66e-10,168;CL:0000988,5.83e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.55e-36;42!CL:0000049;4.28e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.06e-14!80;UBERON:0004765!1.18e-12!101;UBERON:0001434!1.18e-12!101;UBERON:0002193!1.83e-12!112;UBERON:0002390!2.26e-12!102;UBERON:0003061!2.26e-12!102;UBERON:0001474!1.60e-11!86;UBERON:0002405!2.04e-10!115;UBERON:0002204!6.47e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.50e-28,76;UBERON:0001434,3.54e-26,100;UBERON:0001474,4.88e-26,82;UBERON:0002390,9.60e-25,98;UBERON:0003061,9.60e-25,98;UBERON:0002405,3.19e-24,93;UBERON:0002193,1.11e-23,108;UBERON:0004765,3.32e-23,90;UBERON:0002204,1.56e-15,167;UBERON:0003081,1.53e-11,203;UBERON:0000926,2.38e-08,315;UBERON:0004120,2.38e-08,315;UBERON:0006603,2.38e-08,315 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0.767658796194425,0.154816123316076,0.919421224478927,0,0,0,0,0.293600439334847,0,0.802177789880567,0.217010870715852,0.447830948479849,1.29557466407592,2.31818010870768,1.16318591023652,1.51150377475524,0.970336244751265,1.85943229524548,2.46700732813095,2.16794459626573,6.61692502340946,7.42866048934392,5.43909128743746,0,3.22742341791913,1.35426486594342,1.12945403725563,1.63743690034707,0.674170453335254,0.306083892370903,1.92557416245656,1.91801137739712,2.63881040149373,2.39356389145958,2.55734850319616,2.61188314765726,0,0.622822248995575,6.78371396193207,5.73631210262222,5.42972111762792,0.605399502633369,1.10483290796269,0.632924774881769,0.211255286311942,0,0.628975936525128,0.561643155732475,0.300353785683013,0.48217676009124,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0,0,0,0,0.795285947051099,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0,0.348259474598534,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,1.00416183829401,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.942974704487816,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0.597794722207204,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0,1.75591048352335,0.612975591598039,1.05166641234618,0.113432183160021,0,0,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0.57978255948989,1.09098448236334,0.860413786167011,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0.548751427043128,0,0.301586917234893,0.277765335475589,0,0,0,0.463721619900307,0.234817388471643,0.433099343283221,0.462985512576611,0.761016608938393,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0,0.16798212819886,0.425325291727159,0.0895585227028483,0,0,0.492663237895943,0.352193736052904,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0.571652865261156,0.112131084345361,0.43596006883328,0,0.646358578788889,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0.788123040807709,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,0,0.664225598535437,0,0.868836144680828,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.116210378459959,0.483437798366489,0.601519410909855,0,0.114814448164607,0.182091168006717,0.655622074797121,0.451199612907412,0.231046011313244,0,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0.826424576804891,0.384380134730212,0.638063562472921,0.4046311234222,0,0.62962469366128,0.6970372701606,0,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0,0,0.636406495851874,0,0.539617372749944,0,0.353437207037059,0,0,0.421258456238981,0,1.70599442741899,0,0.818999468447914,0,0,0,0.66343897524122,1.31535265576129,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0.354761064070598,0,1.31717957183961,0,0,0.192444225451024,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,1.1486170010348,0.507447609232169,1.52927441428475,1.13929437434833,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0.28853842595289,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0.445773537109913,0,0,0,0,0,0,0.890469640183247,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0.472775363535873,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.219385397153973,0,0.139423744278603,0,0.569710279235006,0,0,0,0.638002319463839,0.0915975934018623,2.13213910407454,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.370691816839509,0,0,0,0,0,0.391329237864179,0,0,0,0,1.01098527405581,0,0,0,0.661983911750998,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| ||
|short_description=p4@PANX1 | |||
}} | }} |
Latest revision as of 03:14, 25 September 2015
Short description: | p4@PANX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PANX1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 327bp_to_ENST00000436171_5end |
EntrezGene: | PANX1 |
HGNC: | 8599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.00e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.00e-44 | 42 |
defensive cell | 6.50e-38 | 48 |
phagocyte | 6.50e-38 | 48 |
monopoietic cell | 3.04e-35 | 59 |
monocyte | 3.04e-35 | 59 |
monoblast | 3.04e-35 | 59 |
promonocyte | 3.04e-35 | 59 |
macrophage dendritic cell progenitor | 6.52e-34 | 61 |
granulocyte monocyte progenitor cell | 3.75e-33 | 67 |
myeloid lineage restricted progenitor cell | 6.21e-31 | 66 |
myeloid leukocyte | 6.74e-28 | 72 |
myeloid cell | 2.31e-18 | 108 |
common myeloid progenitor | 2.31e-18 | 108 |
nongranular leukocyte | 2.26e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.69e-14 | 120 |
leukocyte | 3.87e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.07e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-10 | 161 |
hematopoietic stem cell | 9.66e-10 | 168 |
hematopoietic cell | 5.83e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.50e-28 | 76 |
skeletal system | 3.54e-26 | 100 |
bone element | 4.88e-26 | 82 |
hematopoietic system | 9.60e-25 | 98 |
blood island | 9.60e-25 | 98 |
immune system | 3.19e-24 | 93 |
hemolymphoid system | 1.11e-23 | 108 |
skeletal element | 3.32e-23 | 90 |
musculoskeletal system | 1.56e-15 | 167 |
lateral plate mesoderm | 1.53e-11 | 203 |
mesoderm | 2.38e-08 | 315 |
mesoderm-derived structure | 2.38e-08 | 315 |
presumptive mesoderm | 2.38e-08 | 315 |