FFCP PHASE1:Hg19::chr1:10093188..10093291,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10277 | |EntrezGene=10277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12500 | |HGNC=12500 | ||
|TSSclassifier=strong | |||
|UniProt=B1AQ61 | |UniProt=B1AQ61 | ||
|association_with_transcript=-40bp_to_ENST00000377153_5end | |association_with_transcript=-40bp_to_ENST00000377153_5end | ||
|cluster_id=chr1:10093188..10093291,+ | |||
|description=CAGE_peak_2_at_UBE4B_5end | |description=CAGE_peak_2_at_UBE4B_5end | ||
|id=chr1:10093188..10093291,+ | |id=chr1:10093188..10093291,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.06e-20!254;CL:0002321!1.28e-14!248;CL:0000220!7.66e-14!246;CL:0000221!5.41e-10!71;CL:0000055!3.09e-09!180;CL:0000133!6.73e-09!59;CL:0000333!3.45e-08!41;CL:0000147!2.86e-07!14;CL:0002319!3.54e-07!25;CL:0000148!9.73e-07!10;CL:0000541!9.73e-07!10 | |ontology_enrichment_celltype=CL:0000066!1.06e-20!254;CL:0002321!1.28e-14!248;CL:0000220!7.66e-14!246;CL:0000221!5.41e-10!71;CL:0000055!3.09e-09!180;CL:0000133!6.73e-09!59;CL:0000333!3.45e-08!41;CL:0000147!2.86e-07!14;CL:0002319!3.54e-07!25;CL:0000148!9.73e-07!10;CL:0000541!9.73e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.27e-07;25!CL:0000147;3.01e-07;14!CL:0000148;9.11e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.30e-21,253;CL:0002321,1.49e-14,250;CL:0000221,1.29e-09,72;CL:0000133,7.35e-09,59;CL:0000333,3.43e-08,41;CL:0000147,2.84e-07,14;CL:0002319,3.52e-07,25;CL:0000148,9.68e-07,10;CL:0000541,9.68e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.27e-17!143;DOID:14566!2.60e-15!239;DOID:162!7.47e-15!235;DOID:305!8.29e-13!106 | |ontology_enrichment_disease=DOID:0050687!3.27e-17!143;DOID:14566!2.60e-15!239;DOID:162!7.47e-15!235;DOID:305!8.29e-13!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.15e-17,143;DOID:14566,2.88e-15,239;DOID:162,8.26e-15,235;DOID:305,8.03e-13,106 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.17e-13!365;UBERON:0000064!6.90e-12!219;UBERON:0000119!1.30e-09!312;UBERON:0000483!2.39e-09!309;UBERON:0000063!4.46e-09!97;UBERON:0000481!6.56e-09!347;UBERON:0000924!1.06e-08!173;UBERON:0006601!1.06e-08!173;UBERON:0004121!2.36e-08!169;UBERON:0000468!5.35e-07!659 | |ontology_enrichment_uberon=UBERON:0000475!5.17e-13!365;UBERON:0000064!6.90e-12!219;UBERON:0000119!1.30e-09!312;UBERON:0000483!2.39e-09!309;UBERON:0000063!4.46e-09!97;UBERON:0000481!6.56e-09!347;UBERON:0000924!1.06e-08!173;UBERON:0006601!1.06e-08!173;UBERON:0004121!2.36e-08!169;UBERON:0000468!5.35e-07!659 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.16e-09,309;UBERON:0000483,2.13e-09,306;UBERON:0011216,1.86e-08,223;UBERON:0004121,3.10e-08,171;UBERON:0000924,3.10e-08,171;UBERON:0006601,3.10e-08,171 | |||
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| ||
|short_description=p2@UBE4B | |short_description=p2@UBE4B | ||
}} | }} |
Latest revision as of 04:44, 25 September 2015
Short description: | p2@UBE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBE4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000377153_5end |
EntrezGene: | UBE4B |
HGNC: | 12500 |
UniProt: | B1AQ61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.30e-21 | 253 |
embryonic cell | 1.49e-14 | 250 |
ectodermal cell | 1.29e-09 | 72 |
neurectodermal cell | 7.35e-09 | 59 |
migratory neural crest cell | 3.43e-08 | 41 |
pigment cell | 2.84e-07 | 14 |
neural cell | 3.52e-07 | 25 |
melanocyte | 9.68e-07 | 10 |
melanoblast | 9.68e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.16e-09 | 309 |
epithelium | 2.13e-09 | 306 |
organ system subdivision | 1.86e-08 | 223 |
ectoderm-derived structure | 3.10e-08 | 171 |
ectoderm | 3.10e-08 | 171 |
presumptive ectoderm | 3.10e-08 | 171 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.15e-17 | 143 |
disease of cellular proliferation | 2.88e-15 | 239 |
cancer | 8.26e-15 | 235 |
carcinoma | 8.03e-13 | 106 |