FFCP PHASE1:Hg19::chr7:112090503..112090524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3475 | |EntrezGene=3475 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5456 | |HGNC=5456 | ||
|TSSclassifier=strong | |||
|UniProt=C9JA65 | |UniProt=C9JA65 | ||
|association_with_transcript=0bp_to_ENST00000429071,uc003vgi.2,uc003vgj.2_5end | |association_with_transcript=0bp_to_ENST00000429071,uc003vgi.2,uc003vgj.2_5end | ||
|cluster_id=chr7:112090503..112090524,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_IFRD1_5end | |description=CAGE_peak_1_at_IFRD1_5end | ||
|id=chr7:112090503..112090524,+ | |id=chr7:112090503..112090524,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.32e-22!42;CL:0000738!4.96e-21!140;CL:0000860!7.39e-21!45;CL:0000037!2.29e-16!172;CL:0000566!2.29e-16!172;CL:0000988!5.73e-15!182;CL:0002032!3.28e-14!165;CL:0000837!3.28e-14!165;CL:0002087!6.05e-14!119;CL:0002031!7.32e-14!124;CL:0000766!1.03e-12!76;CL:0000557!3.01e-10!71;CL:0000134!7.29e-10!358;CL:0000763!1.66e-09!112;CL:0000049!1.66e-09!112;CL:0002009!1.85e-09!65;CL:0000839!7.56e-09!70;CL:0002194!1.44e-08!63;CL:0000576!1.44e-08!63;CL:0000040!1.44e-08!63;CL:0000559!1.44e-08!63;CL:0002320!3.12e-08!365;CL:0000081!1.02e-07!11;CL:0000219!1.73e-07!390 | |ontology_enrichment_celltype=CL:0002057!6.32e-22!42;CL:0000738!4.96e-21!140;CL:0000860!7.39e-21!45;CL:0000037!2.29e-16!172;CL:0000566!2.29e-16!172;CL:0000988!5.73e-15!182;CL:0002032!3.28e-14!165;CL:0000837!3.28e-14!165;CL:0002087!6.05e-14!119;CL:0002031!7.32e-14!124;CL:0000766!1.03e-12!76;CL:0000557!3.01e-10!71;CL:0000134!7.29e-10!358;CL:0000763!1.66e-09!112;CL:0000049!1.66e-09!112;CL:0002009!1.85e-09!65;CL:0000839!7.56e-09!70;CL:0002194!1.44e-08!63;CL:0000576!1.44e-08!63;CL:0000040!1.44e-08!63;CL:0000559!1.44e-08!63;CL:0002320!3.12e-08!365;CL:0000081!1.02e-07!11;CL:0000219!1.73e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.50e-17;33!CL:0002057;2.50e-17;33!CL:0000576;6.11e-10;48!CL:0000473;5.11e-09;39!CL:0000234;5.11e-09;39!CL:0000081;1.01e-07;11!CL:0000766;1.49e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.32e-22,42;CL:0002057,6.32e-22,42;CL:0000738,2.19e-21,136;CL:0000037,1.51e-16,168;CL:0000988,1.17e-15,177;CL:0000473,1.21e-14,48;CL:0000234,1.21e-14,48;CL:0002032,2.26e-14,161;CL:0000837,2.26e-14,161;CL:0002087,3.26e-14,115;CL:0002031,4.11e-14,120;CL:0000766,3.70e-13,72;CL:0000557,1.29e-10,67;CL:0000134,3.79e-10,354;CL:0002009,7.90e-10,61;CL:0000763,1.11e-09,108;CL:0000049,1.11e-09,108;CL:0000839,3.74e-09,66;CL:0002194,6.65e-09,59;CL:0000576,6.65e-09,59;CL:0000040,6.65e-09,59;CL:0000559,6.65e-09,59;CL:0002320,1.76e-08,361;CL:0000081,1.02e-07,11;CL:0000219,1.03e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.07e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.30e-12!102;UBERON:0003061!1.30e-12!102;UBERON:0002193!3.69e-09!112;UBERON:0002371!2.39e-08!80;UBERON:0001474!4.48e-08!86;UBERON:0002384!5.92e-08!375;UBERON:0000178!6.49e-07!15;UBERON:0000179!6.49e-07!15;UBERON:0000463!6.49e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!1.30e-12!102;UBERON:0003061!1.30e-12!102;UBERON:0002193!3.69e-09!112;UBERON:0002371!2.39e-08!80;UBERON:0001474!4.48e-08!86;UBERON:0002384!5.92e-08!375;UBERON:0000178!6.49e-07!15;UBERON:0000179!6.49e-07!15;UBERON:0000463!6.49e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.27e-07;15!UBERON:0000179;6.27e-07;15!UBERON:0000463;6.27e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.57e-13,98;UBERON:0003061,6.57e-13,98;UBERON:0002193,2.52e-09,108;UBERON:0002371,1.39e-08,76;UBERON:0001474,2.81e-08,82;UBERON:0002384,3.40e-08,371;UBERON:0000178,6.49e-07,15;UBERON:0000179,6.49e-07,15;UBERON:0000463,6.49e-07,15 | |||
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| ||
|short_description=p1@IFRD1 | |short_description=p1@IFRD1 | ||
}} | }} |
Latest revision as of 05:10, 25 September 2015
Short description: | p1@IFRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFRD1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000429071, uc003vgi.2, uc003vgj.2_5end |
EntrezGene: | IFRD1 |
HGNC: | 5456 |
UniProt: | C9JA65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.32e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.32e-22 | 42 |
leukocyte | 2.19e-21 | 136 |
hematopoietic stem cell | 1.51e-16 | 168 |
hematopoietic cell | 1.17e-15 | 177 |
defensive cell | 1.21e-14 | 48 |
phagocyte | 1.21e-14 | 48 |
hematopoietic oligopotent progenitor cell | 2.26e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.26e-14 | 161 |
nongranular leukocyte | 3.26e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 4.11e-14 | 120 |
myeloid leukocyte | 3.70e-13 | 72 |
granulocyte monocyte progenitor cell | 1.29e-10 | 67 |
mesenchymal cell | 3.79e-10 | 354 |
macrophage dendritic cell progenitor | 7.90e-10 | 61 |
myeloid cell | 1.11e-09 | 108 |
common myeloid progenitor | 1.11e-09 | 108 |
myeloid lineage restricted progenitor cell | 3.74e-09 | 66 |
monopoietic cell | 6.65e-09 | 59 |
monocyte | 6.65e-09 | 59 |
monoblast | 6.65e-09 | 59 |
promonocyte | 6.65e-09 | 59 |
connective tissue cell | 1.76e-08 | 361 |
blood cell | 1.02e-07 | 11 |
motile cell | 1.03e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.57e-13 | 98 |
blood island | 6.57e-13 | 98 |
hemolymphoid system | 2.52e-09 | 108 |
bone marrow | 1.39e-08 | 76 |
bone element | 2.81e-08 | 82 |
connective tissue | 3.40e-08 | 371 |
blood | 6.49e-07 | 15 |
haemolymphatic fluid | 6.49e-07 | 15 |
organism substance | 6.49e-07 | 15 |