FFCP PHASE1:Hg19::chr7:112090761..112090784,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3475 | |EntrezGene=3475 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5456 | |HGNC=5456 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z4L0 | |UniProt=B7Z4L0 | ||
|association_with_transcript=23bp_to_ENST00000536259_5end | |association_with_transcript=23bp_to_ENST00000536259_5end | ||
|cluster_id=chr7:112090761..112090784,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_IFRD1_5end | |description=CAGE_peak_4_at_IFRD1_5end | ||
|id=chr7:112090761..112090784,+ | |id=chr7:112090761..112090784,+ | ||
|ontology_enrichment_celltype=CL:0000738!6.26e-16!140;CL:0002057!4.89e-15!42;CL:0000860!1.85e-14!45;CL:0000766!4.56e-14!76;CL:0000557!7.52e-12!71;CL:0000037!6.90e-11!172;CL:0000566!6.90e-11!172;CL:0002031!8.68e-11!124;CL:0002009!1.35e-10!65;CL:0000839!2.93e-10!70;CL:0002032!3.21e-10!165;CL:0000837!3.21e-10!165;CL:0000988!6.96e-10!182;CL:0002087!9.84e-10!119;CL:0002194!1.37e-09!63;CL:0000576!1.37e-09!63;CL:0000040!1.37e-09!63;CL:0000559!1.37e-09!63;CL:0000763!2.53e-09!112;CL:0000049!2.53e-09!112;CL:0000134!1.55e-07!358 | |ontology_enrichment_celltype=CL:0000738!6.26e-16!140;CL:0002057!4.89e-15!42;CL:0000860!1.85e-14!45;CL:0000766!4.56e-14!76;CL:0000557!7.52e-12!71;CL:0000037!6.90e-11!172;CL:0000566!6.90e-11!172;CL:0002031!8.68e-11!124;CL:0002009!1.35e-10!65;CL:0000839!2.93e-10!70;CL:0002032!3.21e-10!165;CL:0000837!3.21e-10!165;CL:0000988!6.96e-10!182;CL:0002087!9.84e-10!119;CL:0002194!1.37e-09!63;CL:0000576!1.37e-09!63;CL:0000040!1.37e-09!63;CL:0000559!1.37e-09!63;CL:0000763!2.53e-09!112;CL:0000049!2.53e-09!112;CL:0000134!1.55e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.76e-18;33!CL:0002057;2.76e-18;33!CL:0000081;1.53e-13;11!CL:0000094;2.41e-12;8!CL:0000473;3.53e-11;39!CL:0000234;3.53e-11;39!CL:0000766;1.49e-10;69!CL:0000576;2.39e-10;48!CL:0000775;1.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-20,42;CL:0002057,1.71e-20,42;CL:0000766,4.13e-20,72;CL:0000738,1.93e-19,136;CL:0000473,5.09e-17,48;CL:0000234,5.09e-17,48;CL:0000557,5.47e-16,67;CL:0000988,8.59e-16,177;CL:0000037,1.22e-15,168;CL:0002009,1.39e-15,61;CL:0002032,3.39e-15,161;CL:0000837,3.39e-15,161;CL:0000763,3.84e-15,108;CL:0000049,3.84e-15,108;CL:0000081,1.70e-13,11;CL:0002031,1.83e-13,120;CL:0002194,2.23e-13,59;CL:0000576,2.23e-13,59;CL:0000040,2.23e-13,59;CL:0000559,2.23e-13,59;CL:0002087,2.23e-12,115;CL:0000839,2.28e-12,66;CL:0000094,3.18e-12,8;CL:0000134,5.35e-09,354;CL:0002320,1.70e-08,361;CL:0000219,1.05e-07,386;CL:0000775,1.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.85e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.45e-10!102;UBERON:0003061!1.45e-10!102;UBERON:0001474!9.79e-09!86;UBERON:0002371!1.35e-08!80;UBERON:0004765!2.57e-08!101;UBERON:0001434!2.57e-08!101;UBERON:0002193!3.49e-08!112 | |ontology_enrichment_uberon=UBERON:0002390!1.45e-10!102;UBERON:0003061!1.45e-10!102;UBERON:0001474!9.79e-09!86;UBERON:0002371!1.35e-08!80;UBERON:0004765!2.57e-08!101;UBERON:0001434!2.57e-08!101;UBERON:0002193!3.49e-08!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.55e-15,98;UBERON:0003061,3.55e-15,98;UBERON:0002371,3.85e-13,76;UBERON:0002193,7.44e-13,108;UBERON:0001474,1.27e-12,82;UBERON:0004765,8.65e-11,90;UBERON:0002405,2.62e-10,93;UBERON:0001434,6.14e-09,100;UBERON:0002384,2.43e-08,371 | |||
|phase1_expression=1.45342703416445,1.07050261945492,0.986680828671798,0,0,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,1.15148819429164,1.23852898652861,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,0,2.76997704265939,1.20326668482085,1.08505435357926,0.223915474239924,0.32389366601898,0.515151135268373,1.01778767145695,1.13362783106643,0.242584061187816,0.697287110717054,1.6446715520873,0.929119112685311,1.43846196161075,1.0246428261164,1.6553756092201,5.17118521104928,1.93645405075148,1.35426486594342,1.31769637679823,1.63743690034707,3.14612878223118,2.14258724659632,10.9115869205872,9.59005688698562,0,0.797854630486527,1.27867425159808,0.580418477257168,1.13477044938228,0.622822248995575,0.75374599577023,0.521482918420201,1.3031330682307,1.81619850790011,1.10483290796269,2.53169909952708,0.211255286311942,1.06302149982522,0.209658645508376,0.44931452458598,0.300353785683013,0.48217676009124,0,0.19891667719909,0.547992461293902,0,0.546138611262131,0,0,0,0,0,0,2.27685187643779,2.34894875748376,1.52909291250092,0,0,0,0.786839080455332,2.35806457649499,0.822405995998037,0.501559486172034,0.32592226663359,0.473447805734733,0,0.334231370655521,0,0.221533894583621,0,0,0,0.328875809207352,0,0,0.14828656316206,0.535081656179426,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,1.81446068902259,1.60464117470104,0.724122019413995,0,0,0,0,1.00267582127178,0.869079113764942,0.795285947051099,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0.26591592103773,0.715471872916026,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0,0,0.0892997282840798,0,0,0,0,0,21.0848667897701,23.2668158488995,0,0.496971951695318,0.25326102332916,0.397227542439656,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0,0,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0.741800787835671,0,0,0,0.125118519871964,0.277064115484183,0.877955241761676,0.612975591598039,0.600952235626387,0,0,0.213557388818567,0.423863802319124,0,0.412210116953756,0.515281080091258,0.37223371266318,0.506328996723799,0.194874010322397,0,0.828449087780694,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0.121973706129595,0.265059536642971,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0.588664395376038,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0,0.283550194484773,0,0.290633938513962,0,0.492663237895943,0.264145302039678,1.4512968087854,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,1.19812427745791,0,0,0.289562613335158,0.205476322550383,0.179060963239896,5.38008691168931,2.1673383622212,1.72502059887614,1.54011643535698,0,0,0,0.167516265334349,0,11.2351053592077,17.9496875522415,23.621684265854,0,0,0,0.207970861530807,0,0.315404830067869,0.234282829985426,0.601892199455438,2.27407504055985,1.03473071292505,0.664225598535437,0.184369168541703,0.347534457872331,0,0,0,1.2942852049117,0.640365346820666,0.303127571446259,0,0,1.73675465473144,0,0.561320188866147,2.43464383585832,0.511707249066704,0.482561763430822,0,0.308419387605311,0.532685175939381,0.0821271560138091,0.519254429183621,0,1.0877350463246,0.601519410909855,1.56537681191024,0.574072240823034,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.784306353074702,0,0,0.325378394664303,1.95777922130672,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,1.16004861950546,0.154048617114644,0,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.267096106940212,1.4875642382488,0.384380134730212,0.127612712494584,0.809262246844399,0,0.31481234683064,0,0.308033580176089,0,0,0,0.429374660225974,0,0,0,0,1.71175595213568,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0.545999645631943,0.282810863907425,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,1.31801321087491,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0,0,2.59389324477087,0,1.58625035258854,0,0,0,0.743212700502875,0.144269212976445,0.284567373393656,0.159426272728822,0.199579371432817,0,0.211673582723883,0.649243880549111,0,0,0,0,1.01575066680962,0,0,0,1.71752672377882,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0,1.11443384277478,0,0.95497793895076,0.296964680832639,0,0,0.140669416410513,1.44701316529778,0,0,0.398495976502139,0.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| ||
|short_description=p4@IFRD1 | |short_description=p4@IFRD1 | ||
}} | }} |
Latest revision as of 05:11, 25 September 2015
Short description: | p4@IFRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFRD1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 23bp_to_ENST00000536259_5end |
EntrezGene: | IFRD1 |
HGNC: | 5456 |
UniProt: | B7Z4L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.71e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-20 | 42 |
myeloid leukocyte | 4.13e-20 | 72 |
leukocyte | 1.93e-19 | 136 |
defensive cell | 5.09e-17 | 48 |
phagocyte | 5.09e-17 | 48 |
granulocyte monocyte progenitor cell | 5.47e-16 | 67 |
hematopoietic cell | 8.59e-16 | 177 |
hematopoietic stem cell | 1.22e-15 | 168 |
macrophage dendritic cell progenitor | 1.39e-15 | 61 |
hematopoietic oligopotent progenitor cell | 3.39e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.39e-15 | 161 |
myeloid cell | 3.84e-15 | 108 |
common myeloid progenitor | 3.84e-15 | 108 |
blood cell | 1.70e-13 | 11 |
hematopoietic lineage restricted progenitor cell | 1.83e-13 | 120 |
monopoietic cell | 2.23e-13 | 59 |
monocyte | 2.23e-13 | 59 |
monoblast | 2.23e-13 | 59 |
promonocyte | 2.23e-13 | 59 |
nongranular leukocyte | 2.23e-12 | 115 |
myeloid lineage restricted progenitor cell | 2.28e-12 | 66 |
granulocyte | 3.18e-12 | 8 |
mesenchymal cell | 5.35e-09 | 354 |
connective tissue cell | 1.70e-08 | 361 |
motile cell | 1.05e-07 | 386 |
neutrophil | 1.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.55e-15 | 98 |
blood island | 3.55e-15 | 98 |
bone marrow | 3.85e-13 | 76 |
hemolymphoid system | 7.44e-13 | 108 |
bone element | 1.27e-12 | 82 |
skeletal element | 8.65e-11 | 90 |
immune system | 2.62e-10 | 93 |
skeletal system | 6.14e-09 | 100 |
connective tissue | 2.43e-08 | 371 |