FFCP PHASE1:Hg19::chr16:2255447..2255492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64223 | |EntrezGene=64223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24825 | |HGNC=24825 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BVC4 | |UniProt=Q9BVC4 | ||
|association_with_transcript=0bp_to_uc002coy.2,uc002coz.2,uc002cpa.2,uc002cpb.2,uc002cpc.2,uc002cpd.2,uc002cpe.2,uc010uvx.1_5end | |association_with_transcript=0bp_to_uc002coy.2,uc002coz.2,uc002cpa.2,uc002cpb.2,uc002cpc.2,uc002cpd.2,uc002cpe.2,uc010uvx.1_5end | ||
|cluster_id=chr16:2255447..2255492,+ | |||
|coexpression_cluster_id=C1419 | |coexpression_cluster_id=C1419 | ||
|description=CAGE_peak_1_at_MLST8_5end | |description=CAGE_peak_1_at_MLST8_5end | ||
|id=chr16:2255447..2255492,+ | |id=chr16:2255447..2255492,+ | ||
|ontology_enrichment_celltype=CL:0002321!2.84e-12!248;CL:0000220!5.79e-12!246;CL:0000066!3.13e-09!254;CL:0000222!1.77e-08!119;CL:0000183!3.40e-08!59;CL:0000221!2.61e-07!71;CL:0000133!4.61e-07!59;CL:0000055!7.24e-07!180;CL:0000393!7.59e-07!60;CL:0000211!7.59e-07!60 | |ontology_enrichment_celltype=CL:0002321!2.84e-12!248;CL:0000220!5.79e-12!246;CL:0000066!3.13e-09!254;CL:0000222!1.77e-08!119;CL:0000183!3.40e-08!59;CL:0000221!2.61e-07!71;CL:0000133!4.61e-07!59;CL:0000055!7.24e-07!180;CL:0000393!7.59e-07!60;CL:0000211!7.59e-07!60 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.66e-12,250;CL:0000066,2.89e-09,253;CL:0000222,1.10e-08,121;CL:0000221,2.15e-07,72;CL:0000133,4.61e-07,59;CL:0000393,9.64e-07,61;CL:0000211,9.64e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.05e-11!312;UBERON:0000483!9.71e-11!309;UBERON:0000481!4.67e-08!347;UBERON:0004290!5.93e-08!70;UBERON:0000475!1.92e-07!365;UBERON:0005085!2.11e-07!29;UBERON:0000064!2.31e-07!219;UBERON:0000486!2.36e-07!82;UBERON:0000914!4.42e-07!83;UBERON:0002329!4.42e-07!83;UBERON:0003077!4.42e-07!83;UBERON:0003059!4.42e-07!83;UBERON:0007282!4.42e-07!83;UBERON:0009618!4.42e-07!83;UBERON:0007285!4.42e-07!83 | |ontology_enrichment_uberon=UBERON:0000119!3.05e-11!312;UBERON:0000483!9.71e-11!309;UBERON:0000481!4.67e-08!347;UBERON:0004290!5.93e-08!70;UBERON:0000475!1.92e-07!365;UBERON:0005085!2.11e-07!29;UBERON:0000064!2.31e-07!219;UBERON:0000486!2.36e-07!82;UBERON:0000914!4.42e-07!83;UBERON:0002329!4.42e-07!83;UBERON:0003077!4.42e-07!83;UBERON:0003059!4.42e-07!83;UBERON:0007282!4.42e-07!83;UBERON:0009618!4.42e-07!83;UBERON:0007285!4.42e-07!83 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,6.34e-12,309;UBERON:0000483,2.09e-11,306;UBERON:0007503,2.73e-10,78;UBERON:0007524,5.74e-08,73;UBERON:0002329,7.58e-08,71;UBERON:0003059,7.58e-08,71;UBERON:0007282,7.58e-08,71;UBERON:0004290,7.58e-08,71;UBERON:0009618,7.58e-08,71;UBERON:0003077,8.21e-08,72;UBERON:0007285,8.21e-08,72;UBERON:0000486,2.86e-07,83;UBERON:0005085,3.51e-07,31 | |||
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| ||
|short_description=p1@MLST8 | |short_description=p1@MLST8 | ||
}} | }} |
Latest revision as of 05:24, 25 September 2015
Short description: | p1@MLST8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MLST8_5end |
Coexpression cluster: | C1419_Mesenchymal_Alveolar_Renal_Bronchial_Keratocytes_Trabecular_Pericytes |
Association with transcript: | 0bp_to_uc002coy.2, uc002coz.2, uc002cpa.2, uc002cpb.2, uc002cpc.2, uc002cpd.2, uc002cpe.2, uc010uvx.1_5end |
EntrezGene: | MLST8 |
HGNC: | 24825 |
UniProt: | Q9BVC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.66e-12 | 250 |
epithelial cell | 2.89e-09 | 253 |
mesodermal cell | 1.10e-08 | 121 |
ectodermal cell | 2.15e-07 | 72 |
neurectodermal cell | 4.61e-07 | 59 |
electrically responsive cell | 9.64e-07 | 61 |
electrically active cell | 9.64e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cell layer | 6.34e-12 | 309 |
epithelium | 2.09e-11 | 306 |
epithelial vesicle | 2.73e-10 | 78 |
dense mesenchyme tissue | 5.74e-08 | 73 |
somite | 7.58e-08 | 71 |
presomitic mesoderm | 7.58e-08 | 71 |
presumptive segmental plate | 7.58e-08 | 71 |
dermomyotome | 7.58e-08 | 71 |
trunk paraxial mesoderm | 7.58e-08 | 71 |
paraxial mesoderm | 8.21e-08 | 72 |
presumptive paraxial mesoderm | 8.21e-08 | 72 |
multilaminar epithelium | 2.86e-07 | 83 |
ectodermal placode | 3.51e-07 | 31 |