FFCP PHASE1:Hg19::chr8:114449595..114449607,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19291 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z407 | |||
|association_with_transcript=-267bp_to_ENST00000297405_5end | |||
|cluster_id=chr8:114449595..114449607,- | |||
|coexpression_cluster_id=C2913 | |||
|description=CAGE_peak_6_at_CSMD3_5end | |||
|id=chr8:114449595..114449607,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.58e-34;1!CL:0000047;9.86e-18;2!CL:0000138;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.58e-34,1;CL:0000058,7.17e-07,6;CL:0000138,7.17e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.84e-34;1!DOID:4549;1.84e-34;1!DOID:5861;1.84e-34;1!DOID:6496;1.84e-34;1!DOID:1115;1.14e-15;20!DOID:201;7.17e-07;6!DOID:0060100;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.84e-34,1;DOID:4549,1.84e-34,1;DOID:5861,1.84e-34,1;DOID:6496,1.84e-34,1;DOID:1115,1.23e-15,20;DOID:201,7.17e-07,6;DOID:0060100,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002020!7.95e-29!34;UBERON:0003528!7.95e-29!34;UBERON:0001950!3.61e-28!20;UBERON:0000955!1.25e-27!69;UBERON:0006238!1.25e-27!69;UBERON:0001017!2.51e-27!82;UBERON:0001869!7.34e-27!32;UBERON:0001049!7.09e-26!57;UBERON:0005068!7.09e-26!57;UBERON:0006241!7.09e-26!57;UBERON:0007135!7.09e-26!57;UBERON:0005743!8.11e-26!86;UBERON:0002619!1.69e-25!22;UBERON:0001893!3.94e-25!34;UBERON:0002780!1.92e-23!41;UBERON:0001890!1.92e-23!41;UBERON:0006240!1.92e-23!41;UBERON:0000073!7.05e-23!94;UBERON:0001016!7.05e-23!94;UBERON:0003080!8.21e-23!42;UBERON:0002791!1.53e-22!33;UBERON:0000956!2.90e-22!25;UBERON:0000203!2.90e-22!25;UBERON:0002616!3.60e-22!59;UBERON:0002346!1.77e-18!90;UBERON:0003075!1.48e-17!86;UBERON:0007284!1.48e-17!86;UBERON:0003056!1.04e-14!61;UBERON:0000988!1.19e-13!3;UBERON:0000033!2.19e-13!123;UBERON:0000153!1.56e-12!129;UBERON:0007811!1.56e-12!129;UBERON:0000924!2.77e-12!173;UBERON:0006601!2.77e-12!173;UBERON:0004121!1.61e-11!169;UBERON:0002148!7.28e-10!2;UBERON:0009662!7.28e-10!2;UBERON:0001871!2.52e-09!7;UBERON:0002021!1.00e-08!5;UBERON:0001872!1.53e-08!5;UBERON:0007023!3.10e-08!115;UBERON:0002308!5.58e-08!9;UBERON:0000125!5.58e-08!9;UBERON:0000200!3.17e-07!6;UBERON:0006331!7.60e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;1.85e-12;3!UBERON:0004755;1.85e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.85e-12,3;UBERON:0004755,1.85e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.0647399803861,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6154102037077,0,0,0.192687675289379,0,0,0.205116364240755,0.756215088665154,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0,0.351742488719241,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0,0,0,0.913158720509496,0.215927591218621,0,0,0,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0,0,0,0.940634592723046,0,0.235676547101626,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@CSMD3 | |||
}} |
Latest revision as of 05:42, 25 September 2015
Short description: | p6@CSMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CSMD3_5end |
Coexpression cluster: | C2913_extraskeletal_nonsmall_chronic_parietal_occipital_putamen_duodenum |
Association with transcript: | -267bp_to_ENST00000297405_5end |
EntrezGene: | CSMD3 |
HGNC: | 19291 |
UniProt: | Q7Z407 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.58e-34 | 1 |
chondroblast | 7.17e-07 | 6 |
chondrocyte | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 1.85e-12 | 3 |
skeletal tissue | 1.85e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.84e-34 | 1 |
extraosseous chondrosarcoma | 1.84e-34 | 1 |
myxoid chondrosarcoma | 1.84e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 1.84e-34 | 1 |
sarcoma | 1.23e-15 | 20 |
connective tissue cancer | 7.17e-07 | 6 |
musculoskeletal system cancer | 7.17e-07 | 6 |