FFCP PHASE1:Hg19::chr17:46621311..46621332,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3212 | |EntrezGene=3212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5113 | |HGNC=5113 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000504772_5end | |association_with_transcript=-40bp_to_ENST00000504772_5end | ||
|cluster_id=chr17:46621311..46621332,- | |||
|description=CAGE_peak_8_at_HOXB2_5end | |description=CAGE_peak_8_at_HOXB2_5end | ||
|id=chr17:46621311..46621332,- | |id=chr17:46621311..46621332,- | ||
|ontology_enrichment_celltype=CL:0000791!2.76e-11!18;CL:0000789!2.76e-11!18;CL:0002420!2.76e-11!18;CL:0002419!2.76e-11!18;CL:0000790!2.76e-11!18;CL:0000838!2.52e-08!52;CL:0000542!7.54e-08!53;CL:0000051!7.54e-08!53;CL:0000625!2.48e-07!11 | |ontology_enrichment_celltype=CL:0000791!2.76e-11!18;CL:0000789!2.76e-11!18;CL:0002420!2.76e-11!18;CL:0002419!2.76e-11!18;CL:0000790!2.76e-11!18;CL:0000838!2.52e-08!52;CL:0000542!7.54e-08!53;CL:0000051!7.54e-08!53;CL:0000625!2.48e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.05e-18;18!CL:0000789;4.05e-18;18!CL:0002419;4.05e-18;18!CL:0000084;1.04e-12;25!CL:0000625;1.05e-11;11!CL:0000542;1.11e-09;53!CL:0000624;2.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.22e-18,18;CL:0000789,2.22e-18,18;CL:0002420,2.22e-18,18;CL:0002419,2.22e-18,18;CL:0000790,2.22e-18,18;CL:0000838,2.23e-17,52;CL:0000542,7.81e-17,53;CL:0000051,7.81e-17,53;CL:0000084,7.56e-13,25;CL:0000827,7.56e-13,25;CL:0000625,2.01e-11,11;CL:0000624,8.95e-08,6;CL:0000097,9.11e-07,5;CL:0002028,9.11e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;4.05e-18;18!CL:0000051;1.11e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.655324116390517,1.58260186937072,0.74259811776028,0.331397375727916,2.6893005858071,0.602694528023977,0,0.487932798790507,1.10808952269109,1.02000345622126,0.626909442956176,1.43117993565528,0.821246550437305,0.502170558379211,3.132949635666,1.88831355734875,2.75487734597877,0,0.383829398097213,0,0,0,0,0,0,0.880801318004542,0,0.601633342410425,0.651032612147555,0.671746422719773,0,0.515151135268373,0.726991193897824,0,0,0.929716147622738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.336985893439485,0,0.16072558669708,0.285012743741249,0.19891667719909,0.547992461293902,3.51992488922645,1.63841583378639,1.77901850772711,0.426730222566507,1.20118796110804,5.74752439954483,3.30522436392431,2.86216126360609,2.27685187643779,0,0,1.32171328579026,1.68152568894461,1.31692042387539,2.360517241366,1.57204305099666,1.85041349099558,2.67498392625085,5.21475626613745,9.46895611469466,13.6378709885538,2.00538822393312,4.12448270464772,5.75988125917415,8.93652750424551,2.43373507478783,4.55207716459574,0.986627427622057,3.31620021343018,1.73881851441031,4.89345658434799,4.54819407752512,5.22677619024884,1.69964014046349,3.44898444241729,4.81078423675682,3.28925599625354,6.37130828648194,8.46408490013344,6.65316431113862,5.11955404864427,5.88738411310325,9.99445812418767,6.62976305723247,7.39015197228942,0.201606743224732,1.06976078313403,2.31719046212478,12.1903433156981,2.01210257911091,0.255725123687061,0,0,0.434539556882471,0,0.973269740605272,0,0.221729397462564,0,0.392937226493138,0,0,0,0,0.132957960518865,1.19245312152671,3.43196946468077,1.85728750664782,0.39752481473341,0,0,1.13061588384802,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,1.47065232138347,0.81014194788176,0.535798369704479,0.44905874525234,0.112611480483322,1.53316637465883,0,0.549605231791222,0,0,0,0.496971951695318,0.506522046658319,0.794455084879313,0.860509862246441,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.942974704487816,0.653847612453835,0,0,1.40592859100278,0.936480230490962,1.1409436430889,0.448346041655403,0.352303495931295,0.647491777472526,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,1.05965950579781,1.20036438433761,0.824420233907511,1.03056216018252,0.930584281657949,0.337552664482532,0.68205903612839,0,1.10459878370759,0.484938170456436,0.710019185033229,0.503760491138201,0.847802961552438,0.193260853163297,1.09098448236334,0,0.121973706129595,0.132529768321485,0.232387885739037,0.207322110030741,0.504641701751257,0,0,1.92972281457866,1.38134921352481,0.464367928031979,0,0.946454400318751,0.842923450390509,1.92808823906786,1.54411561825352,1.52515610864684,1.66089433377768,0.943819157121151,0.98110732562673,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.301586917234893,0,1.3032332212413,2.07986957055916,0,0.463721619900307,0,0.288732895522148,0,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,2.81201501960331,0.839910640994298,0.425325291727159,0.806026704325635,0,1.53353071666084,2.46331618947972,9.50923087342841,1.4512968087854,2.73827911492227,3.1560608356595,1.14296209725904,1.14596527667483,2.34434894420094,0,0.616964956219941,3.30377363628309,0.285826432630578,0.672786506072164,0.43596006883328,0.1466765716419,1.03417372606222,0,1.690605505112,0,0,0.257207374262142,0,1.3321108950805,0.285955987316295,0.542621605391443,0,1.95441710576241,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.868687840005475,0.61642896765115,1.07436577943937,1.68127715990291,0.788123040807709,1.72502059887614,1.28343036279748,0,0,0,0,0,0,0,0.414415513436035,0.49076596687656,2.00068208423871,0.813795071099207,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.434418072340414,0.195801157462741,0.343143423810856,0.82707210449155,1.2942852049117,0.853820462427555,0.909382714338778,0,0.907170879989041,0.496215615637554,0.61384789315225,1.12264037773229,0.128139149255701,2.04682899626681,0.160853921143607,0,1.54209693802656,1.42049380250502,0.410635780069046,1.55776328755086,1.27831416305955,0.120859449591622,0.802025881213139,0,0.68888668898764,1.27463817604702,0.786746489756545,0.451199612907412,0.616122696835318,0.784349769176855,0,0.316654886678627,0,1.02056223165909,0.863663664408557,3.08454505380579,2.16757150035082,3.01013864312912,1.27438136522519,2.49322802678617,0.223874754722178,0.877039506583738,2.3529190592241,0.512900250232778,0.328014645699706,0.325378394664303,0.721287081534056,0.824125183365091,0.165018999841176,0,0,0,0.96670718292122,0.770243085573222,0.921022048356777,1.51620229732984,0.537101224341368,0.870100163485371,0.767039646744908,0.445160178233687,0,0,0,0,0,0.31481234683064,0.6970372701606,0.616067160352178,0,0.869932992075073,0.37064843820784,0.14312488674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| ||
|short_description=p8@HOXB2 | |short_description=p8@HOXB2 | ||
}} | }} |
Latest revision as of 06:38, 25 September 2015
Short description: | p8@HOXB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HOXB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000504772_5end |
EntrezGene: | HOXB2 |
HGNC: | 5113 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.22e-18 | 18 |
alpha-beta T cell | 2.22e-18 | 18 |
immature T cell | 2.22e-18 | 18 |
mature T cell | 2.22e-18 | 18 |
immature alpha-beta T cell | 2.22e-18 | 18 |
lymphoid lineage restricted progenitor cell | 2.23e-17 | 52 |
lymphocyte | 7.81e-17 | 53 |
common lymphoid progenitor | 7.81e-17 | 53 |
T cell | 7.56e-13 | 25 |
pro-T cell | 7.56e-13 | 25 |
CD8-positive, alpha-beta T cell | 2.01e-11 | 11 |
CD4-positive, alpha-beta T cell | 8.95e-08 | 6 |
mast cell | 9.11e-07 | 5 |
basophil mast progenitor cell | 9.11e-07 | 5 |