FFCP PHASE1:Hg19::chr8:116681150..116681164,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7227 | |EntrezGene=7227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |HGNC=12340 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJ97 | |UniProt=E5RJ97 | ||
|association_with_transcript=-20bp_to_ENST00000519674_5end | |association_with_transcript=-20bp_to_ENST00000519674_5end | ||
|cluster_id=chr8:116681150..116681164,- | |||
|coexpression_cluster_id=C2914 | |||
|description=CAGE_peak_5_at_TRPS1_5end | |description=CAGE_peak_5_at_TRPS1_5end | ||
|id=chr8:116681150..116681164,- | |id=chr8:116681150..116681164,- | ||
|ontology_enrichment_celltype=CL:0002009!6.07e-27!65;CL:0002057!2.78e-26!42;CL:0002194!7.49e-26!63;CL:0000576!7.49e-26!63;CL:0000040!7.49e-26!63;CL:0000559!7.49e-26!63;CL:0000557!1.28e-24!71;CL:0000738!2.44e-24!140;CL:0000766!4.03e-24!76;CL:0002087!4.21e-23!119;CL:0000839!1.47e-22!70;CL:0000860!2.72e-22!45;CL:0002031!1.23e-20!124;CL:0000037!2.27e-15!172;CL:0000566!2.27e-15!172;CL:0000988!4.56e-14!182;CL:0002032!5.40e-14!165;CL:0000837!5.40e-14!165;CL:0000763!3.32e-13!112;CL:0000049!3.32e-13!112;CL:0000134!6.63e-07!358 | |ontology_enrichment_celltype=CL:0002009!6.07e-27!65;CL:0002057!2.78e-26!42;CL:0002194!7.49e-26!63;CL:0000576!7.49e-26!63;CL:0000040!7.49e-26!63;CL:0000559!7.49e-26!63;CL:0000557!1.28e-24!71;CL:0000738!2.44e-24!140;CL:0000766!4.03e-24!76;CL:0002087!4.21e-23!119;CL:0000839!1.47e-22!70;CL:0000860!2.72e-22!45;CL:0002031!1.23e-20!124;CL:0000037!2.27e-15!172;CL:0000566!2.27e-15!172;CL:0000988!4.56e-14!182;CL:0002032!5.40e-14!165;CL:0000837!5.40e-14!165;CL:0000763!3.32e-13!112;CL:0000049!3.32e-13!112;CL:0000134!6.63e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.63e-24;33!CL:0002057;9.63e-24;33!CL:0000473;4.40e-21;39!CL:0000234;4.40e-21;39!CL:0000576;1.33e-20;48!CL:0000766;7.45e-14;69!CL:0002087;7.62e-09;104!CL:0000738;2.84e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.85e-34,61;CL:0002194,9.37e-33,59;CL:0000576,9.37e-33,59;CL:0000040,9.37e-33,59;CL:0000559,9.37e-33,59;CL:0000473,1.03e-31,48;CL:0000234,1.03e-31,48;CL:0000738,2.05e-31,136;CL:0000557,3.76e-31,67;CL:0000766,2.75e-30,72;CL:0000860,3.69e-30,42;CL:0002057,3.69e-30,42;CL:0002087,7.98e-30,115;CL:0000839,5.90e-29,66;CL:0002031,4.37e-27,120;CL:0000037,2.26e-21,168;CL:0000988,1.06e-20,177;CL:0002032,1.85e-19,161;CL:0000837,1.85e-19,161;CL:0000763,7.46e-18,108;CL:0000049,7.46e-18,108;CL:0000134,3.55e-08,354;CL:0002320,1.41e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.82e-22;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.12e-22!80;UBERON:0002390!1.80e-20!102;UBERON:0003061!1.80e-20!102;UBERON:0001474!2.43e-20!86;UBERON:0004765!6.48e-19!101;UBERON:0001434!6.48e-19!101;UBERON:0002193!1.37e-16!112;UBERON:0002204!1.56e-11!167;UBERON:0002405!7.71e-11!115 | |ontology_enrichment_uberon=UBERON:0002371!5.12e-22!80;UBERON:0002390!1.80e-20!102;UBERON:0003061!1.80e-20!102;UBERON:0001474!2.43e-20!86;UBERON:0004765!6.48e-19!101;UBERON:0001434!6.48e-19!101;UBERON:0002193!1.37e-16!112;UBERON:0002204!1.56e-11!167;UBERON:0002405!7.71e-11!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.87e-28,76;UBERON:0001474,1.50e-25,82;UBERON:0002390,2.07e-25,98;UBERON:0003061,2.07e-25,98;UBERON:0004765,3.41e-23,90;UBERON:0002193,1.01e-21,108;UBERON:0001434,1.09e-21,100;UBERON:0002405,2.30e-21,93;UBERON:0002204,1.48e-11,167;UBERON:0002384,4.40e-08,371;UBERON:0003081,6.06e-07,203 | |||
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| ||
|short_description=p5@TRPS1 | |short_description=p5@TRPS1 | ||
}} | }} |
Latest revision as of 06:40, 25 September 2015
Short description: | p5@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRPS1_5end |
Coexpression cluster: | C2914_CD14_breast_small_spinal_osteosarcoma_skin_Macrophage |
Association with transcript: | -20bp_to_ENST00000519674_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | E5RJ97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.85e-34 | 61 |
monopoietic cell | 9.37e-33 | 59 |
monocyte | 9.37e-33 | 59 |
monoblast | 9.37e-33 | 59 |
promonocyte | 9.37e-33 | 59 |
defensive cell | 1.03e-31 | 48 |
phagocyte | 1.03e-31 | 48 |
leukocyte | 2.05e-31 | 136 |
granulocyte monocyte progenitor cell | 3.76e-31 | 67 |
myeloid leukocyte | 2.75e-30 | 72 |
classical monocyte | 3.69e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-30 | 42 |
nongranular leukocyte | 7.98e-30 | 115 |
myeloid lineage restricted progenitor cell | 5.90e-29 | 66 |
hematopoietic lineage restricted progenitor cell | 4.37e-27 | 120 |
hematopoietic stem cell | 2.26e-21 | 168 |
hematopoietic cell | 1.06e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.85e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-19 | 161 |
myeloid cell | 7.46e-18 | 108 |
common myeloid progenitor | 7.46e-18 | 108 |
mesenchymal cell | 3.55e-08 | 354 |
connective tissue cell | 1.41e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.87e-28 | 76 |
bone element | 1.50e-25 | 82 |
hematopoietic system | 2.07e-25 | 98 |
blood island | 2.07e-25 | 98 |
skeletal element | 3.41e-23 | 90 |
hemolymphoid system | 1.01e-21 | 108 |
skeletal system | 1.09e-21 | 100 |
immune system | 2.30e-21 | 93 |
musculoskeletal system | 1.48e-11 | 167 |
connective tissue | 4.40e-08 | 371 |
lateral plate mesoderm | 6.06e-07 | 203 |