FFCP PHASE1:Hg19::chr8:116681150..116681164,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |||
|TSSclassifier=strong | |||
|UniProt=E5RJ97 | |||
|association_with_transcript=-20bp_to_ENST00000519674_5end | |||
|cluster_id=chr8:116681150..116681164,- | |||
|coexpression_cluster_id=C2914 | |||
|description=CAGE_peak_5_at_TRPS1_5end | |||
|id=chr8:116681150..116681164,- | |||
|ontology_enrichment_celltype=CL:0002009!6.07e-27!65;CL:0002057!2.78e-26!42;CL:0002194!7.49e-26!63;CL:0000576!7.49e-26!63;CL:0000040!7.49e-26!63;CL:0000559!7.49e-26!63;CL:0000557!1.28e-24!71;CL:0000738!2.44e-24!140;CL:0000766!4.03e-24!76;CL:0002087!4.21e-23!119;CL:0000839!1.47e-22!70;CL:0000860!2.72e-22!45;CL:0002031!1.23e-20!124;CL:0000037!2.27e-15!172;CL:0000566!2.27e-15!172;CL:0000988!4.56e-14!182;CL:0002032!5.40e-14!165;CL:0000837!5.40e-14!165;CL:0000763!3.32e-13!112;CL:0000049!3.32e-13!112;CL:0000134!6.63e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.63e-24;33!CL:0002057;9.63e-24;33!CL:0000473;4.40e-21;39!CL:0000234;4.40e-21;39!CL:0000576;1.33e-20;48!CL:0000766;7.45e-14;69!CL:0002087;7.62e-09;104!CL:0000738;2.84e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.85e-34,61;CL:0002194,9.37e-33,59;CL:0000576,9.37e-33,59;CL:0000040,9.37e-33,59;CL:0000559,9.37e-33,59;CL:0000473,1.03e-31,48;CL:0000234,1.03e-31,48;CL:0000738,2.05e-31,136;CL:0000557,3.76e-31,67;CL:0000766,2.75e-30,72;CL:0000860,3.69e-30,42;CL:0002057,3.69e-30,42;CL:0002087,7.98e-30,115;CL:0000839,5.90e-29,66;CL:0002031,4.37e-27,120;CL:0000037,2.26e-21,168;CL:0000988,1.06e-20,177;CL:0002032,1.85e-19,161;CL:0000837,1.85e-19,161;CL:0000763,7.46e-18,108;CL:0000049,7.46e-18,108;CL:0000134,3.55e-08,354;CL:0002320,1.41e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.82e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.12e-22!80;UBERON:0002390!1.80e-20!102;UBERON:0003061!1.80e-20!102;UBERON:0001474!2.43e-20!86;UBERON:0004765!6.48e-19!101;UBERON:0001434!6.48e-19!101;UBERON:0002193!1.37e-16!112;UBERON:0002204!1.56e-11!167;UBERON:0002405!7.71e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.87e-28,76;UBERON:0001474,1.50e-25,82;UBERON:0002390,2.07e-25,98;UBERON:0003061,2.07e-25,98;UBERON:0004765,3.41e-23,90;UBERON:0002193,1.01e-21,108;UBERON:0001434,1.09e-21,100;UBERON:0002405,2.30e-21,93;UBERON:0002204,1.48e-11,167;UBERON:0002384,4.40e-08,371;UBERON:0003081,6.06e-07,203 | |||
|phase1_expression=0.54503513781167,0.214100523890983,1.12763523276777,0,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0,0,1.52908960491121,0.527533956456907,1.11389717664042,0.331397375727916,0,0.602694528023977,0.730310090387373,1.95173119516203,0,0,0.626909442956176,2.0036519099174,1.91624195102038,0.753255837568817,0,0,0,3.93364276848904,13.0501995353052,5.88301268601089,0,0.30120591877825,0,0.0774672005803016,0.853015394924529,3.22960483268332,3.32397245119126,4.61252229181326,3.68918480216948,7.16529517567758,7.44955431843653,6.18181362322048,16.2846027433112,10.2026504795979,15.2827958548324,16.7348906572093,10.2791972005456,12.3882548358041,25.3169305243492,19.7243744027408,29.5602787360732,20.6847408441971,14.846147722428,8.12558919566051,12.4239944098119,10.9162460023138,11.2361742222542,19.2832852193669,27.9208253556201,16.6227652707751,20.7806319117631,14.7603106640008,17.0489900213078,10.447532590629,7.94339314567596,9.34233373493363,25.6273638561878,15.644487552606,34.9674039975238,11.502590550034,18.4138817993782,13.9243450473989,5.91514801673437,5.31510749912609,4.82214884669265,5.61643155732475,6.75796017786778,11.5722422421898,3.13514018115373,3.18266683518544,4.20127553658658,0,0.546138611262131,0.889509253863555,0,2.40237592221607,1.72425731986345,1.98313461835459,2.86216126360609,7.39976859842283,12.9192181661607,6.11637165000366,2.64342657158052,2.80254281490768,1.05353633910031,8.06510057466716,9.43225830597995,13.1584959359686,1.17030546773475,3.91106719960308,3.78758244587787,3.89653456815823,0.557052284425868,2.06224135232386,4.87374568083967,10.8321545506006,1.28091319725675,2.47112760363769,0.657751618414705,0.829050053357545,1.15921234294021,3.70716407905151,4.28065324943541,6.27213142829861,0.566546713487831,3.44898444241729,3.09264700934367,10.1207876807801,2.22995790026868,5.20866763085135,0,0.903450714466637,0.639933055772092,2.49861453104692,1.4206635122641,3.28451198768419,7.4594494993151,12.3022490060413,7.38604459802275,9.75227465255847,1.34140171940727,0.255725123687061,1.44575660953827,2.50668955317945,2.89693037921647,0.795285947051099,1.45990461090791,0.756278537312543,0.443458794925128,0.527008714158756,1.24430121722827,0,0,2.27183175558278,4.87563264437948,2.39324328933957,1.90792499444274,2.85997455390064,1.48583000531826,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.225222960966644,0,0,0,0,3.87780264148325,0,6.46063537203914,2.15271869829786,1.58891016975863,1.43418310374407,0.709336764396714,1.68203280042692,1.06748995729705,0.74000264525148,1.24484414159907,0.67355336034844,1.30769522490767,0.454072282934794,1.15235184896,0.468642863667593,0.312160076830321,0,1.04614076386261,1.05691048779388,0.647491777472526,0.140450806702248,1.22492502752936,0.982674538494144,1.34323515528495,0,1.48360157567134,0,0.718618141816238,0.336672227908132,1.12606667884768,1.10825646193673,1.31693286264251,0.612975591598039,1.65261864797256,0.794025282120147,1.79389635688862,2.77624605464138,2.54318281391474,1.80054657650641,1.8549455262919,1.03056216018252,2.97786970130544,4.55696097051419,0.876933046450788,1.51460264546469,2.76149695926898,0.484938170456436,1.42003837006646,1.0075209822764,0.339121184620975,0.57978255948989,0.545492241181669,2.00763216772303,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,3.21620469096443,0,2.3218396401599,0,0.473227200159376,0,0,0.110293972732394,0.653638332277218,0.71181185733329,0.404493924480493,0.98110732562673,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0.514703430895577,2.74375713521564,0,0.201057944823262,0.925884451585296,0.651616610620649,0,1.44331342025273,0,0.70445216541493,0.144366447761074,0,0,0.790204397959275,0.858486162094873,4.67812311566055,1.63802985597466,2.22946743433092,0.93733833986777,2.01578553838631,1.70130116690864,0.358234090811393,1.16253575405585,0.383382679165211,0.492663237895943,0.088048434013226,1.24396869324463,2.45003920808834,1.8936365013957,0.190493682876507,0.763976851116555,0,0,0.308482478109971,0,0.857479297891735,0,0.43596006883328,0.51336800074665,2.19761916788222,3.57656445851882,0,0.531876233169741,0,0.257207374262142,0,1.0656887160644,2.14466990487221,0.542621605391443,0.823240336780769,0.325736184293735,1.77695974371273,0.791951872933429,1.20575750823834,0.871533458600294,1.19967589418468,7.29742683847143,1.50677127429638,4.21667878966063,2.39624855491583,0,11.4109524032575,1.44781306667579,1.02738161275192,1.61154866915906,0,5.91092280605782,9.48761329381876,6.54549485026717,6.09827098133912,3.90419561572865,2.31986643833309,0.670065061337395,1.27587750330633,0.749007023947182,0,1.24324654030811,1.8403723757871,0,0,2.07970861530807,3.21172179834891,2.83864347061082,3.16281820480326,0.601892199455438,0,0,0.664225598535437,0.737476674166813,1.47702144595741,0,0.686286847621712,9.30456117552993,8.62856803274467,7.25747393063422,0,0,0.30239029332968,0.744323423456331,1.38115775959256,0.561320188866147,2.81906128362542,2.04682899626681,1.7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| |||
|short_description=p5@TRPS1 | |||
}} |
Latest revision as of 06:40, 25 September 2015
Short description: | p5@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRPS1_5end |
Coexpression cluster: | C2914_CD14_breast_small_spinal_osteosarcoma_skin_Macrophage |
Association with transcript: | -20bp_to_ENST00000519674_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | E5RJ97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.85e-34 | 61 |
monopoietic cell | 9.37e-33 | 59 |
monocyte | 9.37e-33 | 59 |
monoblast | 9.37e-33 | 59 |
promonocyte | 9.37e-33 | 59 |
defensive cell | 1.03e-31 | 48 |
phagocyte | 1.03e-31 | 48 |
leukocyte | 2.05e-31 | 136 |
granulocyte monocyte progenitor cell | 3.76e-31 | 67 |
myeloid leukocyte | 2.75e-30 | 72 |
classical monocyte | 3.69e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-30 | 42 |
nongranular leukocyte | 7.98e-30 | 115 |
myeloid lineage restricted progenitor cell | 5.90e-29 | 66 |
hematopoietic lineage restricted progenitor cell | 4.37e-27 | 120 |
hematopoietic stem cell | 2.26e-21 | 168 |
hematopoietic cell | 1.06e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.85e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-19 | 161 |
myeloid cell | 7.46e-18 | 108 |
common myeloid progenitor | 7.46e-18 | 108 |
mesenchymal cell | 3.55e-08 | 354 |
connective tissue cell | 1.41e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.87e-28 | 76 |
bone element | 1.50e-25 | 82 |
hematopoietic system | 2.07e-25 | 98 |
blood island | 2.07e-25 | 98 |
skeletal element | 3.41e-23 | 90 |
hemolymphoid system | 1.01e-21 | 108 |
skeletal system | 1.09e-21 | 100 |
immune system | 2.30e-21 | 93 |
musculoskeletal system | 1.48e-11 | 167 |
connective tissue | 4.40e-08 | 371 |
lateral plate mesoderm | 6.06e-07 | 203 |