FFCP PHASE1:Hg19::chr8:116681409..116681431,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7227 | |EntrezGene=7227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |HGNC=12340 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHF7 | |UniProt=Q9UHF7 | ||
|association_with_transcript=-181bp_to_ENST00000395715,NM_014112,uc003yny.2,uc003ynz.2,uc010mcy.2_5end | |association_with_transcript=-181bp_to_ENST00000395715,NM_014112,uc003yny.2,uc003ynz.2,uc010mcy.2_5end | ||
|cluster_id=chr8:116681409..116681431,- | |||
|description=CAGE_peak_2_at_TRPS1_5end | |description=CAGE_peak_2_at_TRPS1_5end | ||
|id=chr8:116681409..116681431,- | |id=chr8:116681409..116681431,- | ||
|ontology_enrichment_celltype=CL:0002057!5.03e-14!42;CL:0000860!3.21e-11!45;CL:0002009!1.60e-09!65;CL:0002194!7.92e-09!63;CL:0000576!7.92e-09!63;CL:0000040!7.92e-09!63;CL:0000559!7.92e-09!63;CL:0000557!4.14e-08!71;CL:0000766!5.76e-07!76;CL:0000839!9.12e-07!70 | |ontology_enrichment_celltype=CL:0002057!5.03e-14!42;CL:0000860!3.21e-11!45;CL:0002009!1.60e-09!65;CL:0002194!7.92e-09!63;CL:0000576!7.92e-09!63;CL:0000040!7.92e-09!63;CL:0000559!7.92e-09!63;CL:0000557!4.14e-08!71;CL:0000766!5.76e-07!76;CL:0000839!9.12e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.89e-17;33!CL:0002057;2.89e-17;33!CL:0000473;1.27e-12;39!CL:0000234;1.27e-12;39!CL:0000576;2.11e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.33e-14,42;CL:0002057,4.33e-14,42;CL:0000473,2.80e-12,48;CL:0000234,2.80e-12,48;CL:0002009,1.74e-11,61;CL:0002194,1.06e-10,59;CL:0000576,1.06e-10,59;CL:0000040,1.06e-10,59;CL:0000559,1.06e-10,59;CL:0000557,6.76e-10,67;CL:0000766,1.02e-08,72;CL:0000839,1.97e-08,66 | |||
|ontology_enrichment_development_v019=CL:0002057;4.99e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!5.41e-12!511;UBERON:0004765!1.81e-10!101;UBERON:0001434!1.81e-10!101;UBERON:0002204!2.18e-10!167;UBERON:0000468!3.11e-10!659;UBERON:0000922!6.52e-09!612;UBERON:0002050!8.93e-09!605;UBERON:0005423!8.93e-09!605;UBERON:0000923!1.69e-08!604;UBERON:0005291!1.69e-08!604;UBERON:0006598!1.69e-08!604;UBERON:0002532!1.69e-08!604;UBERON:0001474!2.64e-08!86;UBERON:0000467!3.19e-08!625;UBERON:0000480!4.82e-08!626;UBERON:0002371!6.25e-08!80;UBERON:0001049!5.59e-07!57;UBERON:0005068!5.59e-07!57;UBERON:0006241!5.59e-07!57;UBERON:0007135!5.59e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,1.73e-13,100;UBERON:0002204,1.58e-11,167;UBERON:0004765,2.13e-11,90;UBERON:0001474,4.89e-10,82;UBERON:0002371,1.11e-09,76;UBERON:0001049,6.45e-07,56;UBERON:0005068,6.45e-07,56;UBERON:0006241,6.45e-07,56;UBERON:0007135,6.45e-07,56;UBERON:0010314,6.64e-07,132;UBERON:0002050,9.60e-07,564 | |||
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| ||
|short_description=p2@TRPS1 | |short_description=p2@TRPS1 | ||
}} | }} |
Latest revision as of 06:45, 25 September 2015
Short description: | p2@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -181bp_to_ENST00000395715, NM_014112, uc003yny.2, uc003ynz.2, uc010mcy.2_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | Q9UHF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.33e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.33e-14 | 42 |
defensive cell | 2.80e-12 | 48 |
phagocyte | 2.80e-12 | 48 |
macrophage dendritic cell progenitor | 1.74e-11 | 61 |
monopoietic cell | 1.06e-10 | 59 |
monocyte | 1.06e-10 | 59 |
monoblast | 1.06e-10 | 59 |
promonocyte | 1.06e-10 | 59 |
granulocyte monocyte progenitor cell | 6.76e-10 | 67 |
myeloid leukocyte | 1.02e-08 | 72 |
myeloid lineage restricted progenitor cell | 1.97e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 1.73e-13 | 100 |
musculoskeletal system | 1.58e-11 | 167 |
skeletal element | 2.13e-11 | 90 |
bone element | 4.89e-10 | 82 |
bone marrow | 1.11e-09 | 76 |
neural tube | 6.45e-07 | 56 |
neural rod | 6.45e-07 | 56 |
future spinal cord | 6.45e-07 | 56 |
neural keel | 6.45e-07 | 56 |
structure with developmental contribution from neural crest | 6.64e-07 | 132 |
embryonic structure | 9.60e-07 | 564 |