FFCP PHASE1:Hg19::chr17:46687935..46687950,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3217 | |EntrezGene=3217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5118 | |HGNC=5118 | ||
|TSSclassifier=strong | |||
|UniProt=P09629 | |UniProt=P09629 | ||
|association_with_transcript=-9bp_to_M30598_5end | |association_with_transcript=-9bp_to_M30598_5end | ||
|cluster_id=chr17:46687935..46687950,- | |||
|description=CAGE_peak_3_at_HOXB7_5end | |description=CAGE_peak_3_at_HOXB7_5end | ||
|id=chr17:46687935..46687950,- | |id=chr17:46687935..46687950,- | ||
|ontology_enrichment_celltype=CL:0000066!1.18e-10!254;CL:0000136!4.22e-09!15;CL:0002334!3.09e-07!12 | |ontology_enrichment_celltype=CL:0000066!1.18e-10!254;CL:0000136!4.22e-09!15;CL:0002334!3.09e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.25e-10;13!CL:0002334;1.09e-09;12!CL:0002681;5.94e-08;12!CL:0002584;5.94e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.23e-13,253;CL:0000136,1.66e-12,15;CL:0002334,2.03e-09,12;CL:0002681,7.69e-08,12;CL:0002584,7.69e-08,12;CL:0000213,8.11e-07,58;CL:0000215,8.11e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.10e-13!235;DOID:14566!1.44e-13!239;DOID:0050687!1.22e-12!143;DOID:305!8.39e-11!106 | |ontology_enrichment_disease=DOID:162!1.10e-13!235;DOID:14566!1.44e-13!239;DOID:0050687!1.22e-12!143;DOID:305!8.39e-11!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.61e-11,106;DOID:14566,5.53e-10,239;DOID:0050687,6.10e-10,143;DOID:162,9.97e-10,235 | |||
|ontology_enrichment_uberon=UBERON:0003886!1.84e-08!63;UBERON:0002100!3.34e-08!216;UBERON:0000489!3.48e-08!32;UBERON:0005409!4.19e-08!35;UBERON:0001737!2.07e-07!9;UBERON:0001008!2.31e-07!45;UBERON:0001851!4.02e-07!16;UBERON:0000058!6.08e-07!26;UBERON:0006554!6.40e-07!44;UBERON:0000080!6.55e-07!18;UBERON:0002120!6.55e-07!18;UBERON:0004875!6.55e-07!18;UBERON:0005721!6.55e-07!18;UBERON:0005754!6.55e-07!18;UBERON:0007297!6.55e-07!18;UBERON:0003064!6.99e-07!37;UBERON:0002553!9.88e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.83e-11;9!UBERON:0001557;7.83e-11;9!UBERON:0001851;2.22e-08;15!UBERON:0001225;5.94e-08;12!UBERON:0008987;5.94e-08;12!UBERON:0003688;1.24e-07;6!UBERON:0002358;1.24e-07;6!UBERON:0003684;1.24e-07;6!UBERON:0001178;1.24e-07;6!UBERON:0000353;4.56e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.94e-11,9;UBERON:0001851,2.62e-08,15;UBERON:0001225,7.69e-08,12;UBERON:0008987,7.69e-08,12;UBERON:0003688,1.04e-07,6;UBERON:0002358,1.04e-07,6;UBERON:0003684,1.04e-07,6;UBERON:0001178,1.04e-07,6;UBERON:0000489,1.10e-07,31;UBERON:0000080,1.46e-07,9;UBERON:0002120,1.46e-07,9;UBERON:0004875,1.46e-07,9;UBERON:0005721,1.46e-07,9;UBERON:0005754,1.46e-07,9;UBERON:0007297,1.46e-07,9;UBERON:0000353,6.16e-07,15 | |||
|phase1_expression=4.54195948176392,3.42560838225573,4.36958652697511,2.00146596706261,1.78784437770915,0.872338524100369,0,3.15859936713415,1.04474251279935,0.491467873003018,0,0,0.791300934685361,1.23766352960047,1.98838425436749,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03366703667732,2.13459757612026,1.67360306382335,1.20848795132744,0.760272105718513,0.488124115096339,1.10298924103761,4.0507097394088,2.05389375053383,3.81699933464489,3.49095589498299,0,0.949265659568129,1.28241220751285,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,1.49448680551801,1.17434498643765,1.94247533241758,0.98315564691574,0,0,0,0,0,2.73048408581408,2.87447256726495,0,0,0,0,0,0,0.113432183160021,0,0.85422955527427,0.423863802319124,0,0.824420233907511,0,0.558350568994769,0.337552664482532,1.46155507741798,0,0.368199594569197,0,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,1.39310378409594,0,3.54920400119532,2.52877035117153,2.6511213287183,2.64705534557745,3.4860711054785,4.27087114399974,2.83145747136345,2.15843611637881,3.07797725557112,0,0,0.4115740113314,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0.866198686566443,0.925971025153221,0.761016608938393,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,1.14296209725904,1.14596527667483,1.17217447210047,0,1.23392991243988,2.10240140490742,1.42913216315289,0,0,0,1.16344544182,0,0,0,0,0,0,0.532844358032199,0.142977993658148,1.62786481617433,0.823240336780769,0,0,0,2.1100756394171,0.871533458600294,1.79951384127703,0,0,0,0,0,2.85273810081437,0.723906533337896,0.205476322550383,1.79060963239896,0.784596007954691,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0.500170521059677,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,3.2254015016441,1.38115775959256,2.24528075546459,4.74114852246094,3.58195074346692,2.73451665944133,1.48418066444991,1.54209693802656,1.06537035187876,2.05317890034523,0.519254429183621,1.04589340613963,1.0877350463246,2.20557117333613,0.460404944679482,0,0,0.131124414959424,1.35359883872224,0.539107359730903,0.784349769176855,0,0.316654886678627,2.27466768141793,2.38131187387122,1.0795795805107,4.62681758070868,1.89662506280697,1.50506932156456,3.05851527654046,2.49322802678617,2.0148727924996,0,0,0,0,0,0.309123034943167,0.27470839445503,1.56768049849117,0,0,0,0.096670718292122,0.616194468458578,0.15350367472613,0.275673144969061,0,0,0.93749290157711,0.0890320356467374,0,0,0,0,0.464845549297286,0,0.6970372701606,1.84820148105653,0,0.869932992075073,0,0,0,0,0.190630193923825,1.02359116524534,0.855877976067841,0,0,0.719489830333259,0.823611089208164,1.29593642580255,0,0,0,0,2.43713489631284,0,0,0,2.26016233240486,0,0,0.876901770507525,0,0,0.811641507850816,0.92947049429925,0.281695602532241,1.57752487424457,0.589494246078727,2.49669736036875,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,1.72202149068492,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0.320472213382419,0,2.20536194382929,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4155729649014,1.46508179271894,1.33496573924465,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0.329607748453519,0,0.996239941255349,2.76283915531148,0.503865495708552,2.86352311006033,0.123084805461069,0,0,0.895105873378046,0,0.295930216910801,0,8.89095921157095,0,0,0,0,0,4.34999745260876,0,0,3.07303986298317,0,0.874813840149763,0.347249989866585,0,0,0,0,0,0.219385397153973,2.61452312445576,5.15867853830832,0.769502585037971,1.25336261431701,0,0,0.108647371922008,0.638002319463839,0.183195186803725,1.5991043280559,0,0,0,0.676786981851542,0.19606253431774,0.167821586975843,0.569261198172555,0,1.26598838716816,0,0.989471500037586,0,0,1.14994833854341,5.49927130440263,0.296521128680622,1.11207545051853,0.313265848516366,0,0,0,0,0.782658475728359,0.485560759068186,4.3404284313433,0,0,0.126373159256976,0.450970258243478,0.207376382794494,1.32930774541437,0.661983911750998,0.627865836814451,1.19472429772959,0.284609546029793,1.94144542218394,0,4.70363507589013,1.56706571844725,2.79562669187248,1.37588825977293,3.77349692027432,7.38202102570474,4.27000376676688,0.0969890164884194,0.0882561266915003,0,0.959293472527256,2.18586072873289,0,2.73771935828724,0.561111741760736,0,2.59752492456769,1.29681375438695,1.83258553865465,0,3.60136994970374,0.869767748958028,4.9495747269527,0.543616824294456,1.04602846312333,0,0.866851769704557,0,0.136905378891993,0,0.429765441419957,0,0,0,0,1.19807400299395,0,0,0,0.36029988354240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| 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| ||
|short_description=p3@HOXB7 | |short_description=p3@HOXB7 | ||
}} | }} |
Latest revision as of 07:29, 25 September 2015
Short description: | p3@HOXB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXB7_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_M30598_5end |
EntrezGene: | HOXB7 |
HGNC: | 5118 |
UniProt: | P09629 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.23e-13 | 253 |
fat cell | 1.66e-12 | 15 |
preadipocyte | 2.03e-09 | 12 |
kidney cortical cell | 7.69e-08 | 12 |
renal cortical epithelial cell | 7.69e-08 | 12 |
lining cell | 8.11e-07 | 58 |
barrier cell | 8.11e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.94e-11 | 9 |
cortex | 2.62e-08 | 15 |
cortex of kidney | 7.69e-08 | 12 |
renal parenchyma | 7.69e-08 | 12 |
omentum | 1.04e-07 | 6 |
peritoneum | 1.04e-07 | 6 |
abdominal cavity | 1.04e-07 | 6 |
visceral peritoneum | 1.04e-07 | 6 |
cavitated compound organ | 1.10e-07 | 31 |
mesonephros | 1.46e-07 | 9 |
pronephros | 1.46e-07 | 9 |
nephrogenic cord | 1.46e-07 | 9 |
pronephric mesoderm | 1.46e-07 | 9 |
rostral part of nephrogenic cord | 1.46e-07 | 9 |
presumptive pronephric mesoderm | 1.46e-07 | 9 |
parenchyma | 6.16e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.61e-11 | 106 |
disease of cellular proliferation | 5.53e-10 | 239 |
cell type cancer | 6.10e-10 | 143 |
cancer | 9.97e-10 | 235 |