FFCP PHASE1:Hg19::chr17:46703942..46703964,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3219 | |EntrezGene=3219 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5120 | |HGNC=5120 | ||
|TSSclassifier=strong | |||
|UniProt=P17482 | |UniProt=P17482 | ||
|association_with_transcript=-103bp_to_ENST00000311177_5end | |association_with_transcript=-103bp_to_ENST00000311177_5end | ||
|cluster_id=chr17:46703942..46703964,- | |||
|description=CAGE_peak_4_at_HOXB9_5end | |description=CAGE_peak_4_at_HOXB9_5end | ||
|id=chr17:46703942..46703964,- | |id=chr17:46703942..46703964,- | ||
|ontology_enrichment_celltype=CL:1000507;4.44e-17;10!CL:1000494;4.44e-17;10!CL:1000497;1.67e-11;17!CL:0002518;1.67e-11;17!CL:1000449;1.01e-10;15!CL:0000244;3.48e-09;4!CL:0000731;3.48e-09;4!CL:0000082;1.98e-07;19!CL:0000239;2.20e-07;3!CL:1000615;2.20e-07;3!CL:0002306;2.20e-07;3 | |ontology_enrichment_celltype=CL:0000066!6.77e-17!254;CL:1000507!2.25e-08!12;CL:1000494!2.25e-08!12;CL:1000497!6.36e-08!18;CL:0002518!6.36e-08!18 | ||
| | |ontology_enrichment_celltype_v019=CL:1000507;4.44e-17;10!CL:1000494;4.44e-17;10!CL:1000497;1.67e-11;17!CL:0002518;1.67e-11;17!CL:1000449;1.01e-10;15!CL:0000244;3.48e-09;4!CL:0000731;3.48e-09;4!CL:0000082;1.98e-07;19!CL:0000239;2.20e-07;3!CL:1000615;2.20e-07;3!CL:0002306;2.20e-07;3 | ||
|ontology_enrichment_disease=DOID:1324;7.02e-10;15!DOID:0050615;3.77e-09;16!DOID:1749;1.96e-08;14!DOID:3905;4.37e-08;9!DOID:4362;5.90e-07;5 | |ontology_enrichment_celltype_v019_2=CL:1000507,4.62e-17,10;CL:1000494,4.62e-17,10;CL:0000066,2.12e-14,253;CL:1000497,1.75e-11,17;CL:0002518,1.75e-11,17;CL:1000449,1.04e-10,15;CL:0000244,2.70e-09,4;CL:0000731,2.70e-09,4;CL:0000239,1.68e-07,3;CL:1000615,1.68e-07,3;CL:0002306,1.68e-07,3;CL:0000082,1.74e-07,19 | ||
|ontology_enrichment_uberon=UBERON:0006554;1.43e-19;30!UBERON:0001008;1.43e-19;30!UBERON:0004211;4.44e-17;10!UBERON:0009773;4.44e-17;10!UBERON:0001231;4.44e-17;10!UBERON:0004810;4.44e-17;10!UBERON:0000489;9.75e-14;29!UBERON:0002113;5.13e-13;24!UBERON:0011143;5.13e-13;24!UBERON:0000365;9.06e-11;5!UBERON:0006555;1.01e-10;15!UBERON:0004819;1.01e-10;15!UBERON:0001285;1.01e-10;15!UBERON:0007684;1.01e-10;15!UBERON:0004175;2.84e-10;21!UBERON:0005910;6.66e-09;6!UBERON:0005911;8.55e-08;36!UBERON:0000058;1.01e-07;10!UBERON:0006947;1.82e-07;3!UBERON:0004054;1.82e-07;3!UBERON:0004802;1.98e-07;19!UBERON:0000115;1.98e-07;19!UBERON:0006853;2.20e-07;3!UBERON:0007685;2.20e-07;3!UBERON:0004134;2.20e-07;3!UBERON:0000995;7.76e-07;17 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!8.64e-24!239;DOID:0050687!1.17e-23!143;DOID:162!2.62e-23!235;DOID:305!1.49e-22!106;DOID:299!3.05e-09!25;DOID:0050686!3.04e-07!137;DOID:1749!6.96e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1324;7.02e-10;15!DOID:0050615;3.77e-09;16!DOID:1749;1.96e-08;14!DOID:3905;4.37e-08;9!DOID:4362;5.90e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.16e-14,239;DOID:0050687,2.25e-13,143;DOID:162,2.35e-13,235;DOID:305,5.35e-13,106;DOID:1324,5.90e-10,15;DOID:0050615,3.20e-09,16;DOID:1749,1.81e-08,14;DOID:3905,3.12e-08,9;DOID:4362,4.06e-07,5;DOID:0050686,7.59e-07,137;DOID:4556,7.88e-07,3;DOID:3908,7.94e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001008!1.39e-15!45;UBERON:0006554!5.06e-15!44;UBERON:0000489!2.38e-13!32;UBERON:0002113!1.77e-11!27;UBERON:0003918!1.77e-11!27;UBERON:0005095!1.77e-11!27;UBERON:0007687!1.77e-11!27;UBERON:0005177!1.88e-10!107;UBERON:0000058!3.63e-10!26;UBERON:0002417!1.14e-09!61;UBERON:0000916!1.14e-09!61;UBERON:0003064!6.86e-09!37;UBERON:0003886!1.05e-08!63;UBERON:0009773!2.25e-08!12;UBERON:0001231!2.25e-08!12;UBERON:0004810!2.25e-08!12;UBERON:0000464!3.74e-08!104;UBERON:0000080!4.12e-08!18;UBERON:0002120!4.12e-08!18;UBERON:0004875!4.12e-08!18;UBERON:0005721!4.12e-08!18;UBERON:0005754!4.12e-08!18;UBERON:0007297!4.12e-08!18;UBERON:0002553!1.57e-07!70;UBERON:0000466!1.95e-07!126;UBERON:0006555!2.81e-07!17;UBERON:0005103!2.81e-07!17;UBERON:0000083!2.81e-07!17;UBERON:0009201!2.81e-07!17;UBERON:0004819!2.81e-07!17;UBERON:0006553!2.81e-07!17;UBERON:0003074!2.81e-07!17;UBERON:0003060!2.81e-07!17;UBERON:0009569!3.67e-07!113;UBERON:0005172!4.39e-07!55;UBERON:0005173!4.39e-07!55;UBERON:0004119!5.68e-07!169;UBERON:0000925!5.68e-07!169;UBERON:0006595!5.68e-07!169;UBERON:0004876!6.92e-07!20;UBERON:0005910!7.13e-07!6;UBERON:0004175!7.77e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.43e-19;30!UBERON:0001008;1.43e-19;30!UBERON:0004211;4.44e-17;10!UBERON:0009773;4.44e-17;10!UBERON:0001231;4.44e-17;10!UBERON:0004810;4.44e-17;10!UBERON:0000489;9.75e-14;29!UBERON:0002113;5.13e-13;24!UBERON:0011143;5.13e-13;24!UBERON:0000365;9.06e-11;5!UBERON:0006555;1.01e-10;15!UBERON:0004819;1.01e-10;15!UBERON:0001285;1.01e-10;15!UBERON:0007684;1.01e-10;15!UBERON:0004175;2.84e-10;21!UBERON:0005910;6.66e-09;6!UBERON:0005911;8.55e-08;36!UBERON:0000058;1.01e-07;10!UBERON:0006947;1.82e-07;3!UBERON:0004054;1.82e-07;3!UBERON:0004802;1.98e-07;19!UBERON:0000115;1.98e-07;19!UBERON:0006853;2.20e-07;3!UBERON:0007685;2.20e-07;3!UBERON:0004134;2.20e-07;3!UBERON:0000995;7.76e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,1.01e-18,47;UBERON:0001008,3.41e-18,48;UBERON:0004810,4.62e-17,10;UBERON:0000489,1.31e-16,31;UBERON:0002113,6.47e-16,26;UBERON:0003918,6.47e-16,26;UBERON:0011143,6.47e-16,26;UBERON:0005095,6.47e-16,26;UBERON:0007687,6.47e-16,26;UBERON:0005177,3.49e-12,101;UBERON:0006555,3.63e-12,16;UBERON:0004819,3.63e-12,16;UBERON:0000365,5.14e-11,5;UBERON:0004211,1.04e-10,15;UBERON:0009773,1.04e-10,15;UBERON:0001231,1.04e-10,15;UBERON:0001285,1.04e-10,15;UBERON:0007684,1.04e-10,15;UBERON:0004208,1.04e-10,15;UBERON:0005910,4.18e-09,6;UBERON:0004175,1.90e-08,25;UBERON:0002417,2.85e-08,60;UBERON:0000916,2.85e-08,60;UBERON:0005172,1.08e-07,54;UBERON:0005173,1.08e-07,54;UBERON:0009569,1.19e-07,112;UBERON:0006947,1.44e-07,3;UBERON:0004054,1.44e-07,3;UBERON:0006853,1.68e-07,3;UBERON:0007685,1.68e-07,3;UBERON:0004134,1.68e-07,3;UBERON:0004802,1.74e-07,19;UBERON:0000115,1.74e-07,19;UBERON:0005911,4.10e-07,82 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,0.66944122552934,0,1.52054421143703,0.488124115096339,0,0,0,0,0,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.468642863667593,0,0,0,0.469737994575059,0.161872944368132,0,0,0,0,0,0,0,2.87447256726495,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,1.0126579934476,1.07180705677318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0,0.949082476444386,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,1.90994212779139,0,0,0,0,0.285826432630578,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,8.07013036753396,0.788123040807709,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.640695746278505,1.02341449813341,0.965123526861645,0,0,0,0,0,0,1.20859449591622,0,2.67034867914099,0,0,0,2.25599806453706,4.08181286653398,3.92174884588428,4.38417673959782,4.74982330017941,0,0.510281115829547,0.431831832204279,0,0,1.00337954770971,1.78413391131527,4.15538004464362,3.58199607555485,0,0,0,0,0,0.206082023295445,0.457847324091717,0.495056999523528,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.573645408816206,0.392996164052485,0,0,0,0,0,0,0.0962221127255121,0,0,0,2.58303223602738,5.05414427002877,2.21715076768338,1.83778720165568,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,1.49712432326576,0,0.485442086998054,8.58114058936583,1.70481688083848,0,0,0,0,0,0.445234820091624,0,0,0,0.276283915531148,0,1.22722419002586,0.123084805461069,0,0,5.54965641494388,0,0.295930216910801,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,11.8742925235699,1.39423744278603,0.0769502585037971,0.91153644677601,0,0,0,0,0.183195186803725,0,0,0,0,0.676786981851542,0.784250137270958,0.671286347903371,0.75901493089674,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0.995261931078505,0.353830258013357,0,3.55825354416746,2.34771483998355,1.25306339406546,0,0,0,0,0,0.728341138602278,5.12959723704208,0,0,0,24.2020705257333,0.72581733978073,0.664653872707185,5.62686324988348,2.19753042885058,1.19472429772959,2.84609546029793,5.26963757449927,0,0.0979923974143777,1.65412492502765,1.7472666824203,0.51595809741485,0,0,0,0,0,0,3.70013196546227,0.19871461170299,0,0.391102765469606,4.16825865307975,0,1.59847687665704,0.72045208577053,7.78848853928227,0.857974989309823,8.93139747526528,1.24252535565433,0.707082103850386,0.135904206073614,0.313808538937,0.815985741090574,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0,0,0,0,0,0,0,1.33969702408637,2.51782023047991,1.37280437475228,1.79287339332845,2.30298236783334,0,0,0,0,0,0,3.59190574687462,1.23138781124008,0,0.79318464064088,0,0,0,0,1.02652102730598,0,0,0,0.414239055347196,0,2.17372795087739,0.121792598380896,1.27668251554036,0,0,0,0,0.942324577501406,0,0,0,0,0,0,0,0,2.12308764558307,4.28198000317451,3.2937214757744,0,1.44921028610825,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06336685823198,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,1.54095864325843,0,1.04397716786085,0,0.926089897295336,2.93684045407761,1.25362188757041,0,0,1.23682402162117,0,0,0.256241518587947,0,0.607719912354764,0,0,0,0,0.982829546539238,0.983091635014877,2.3244333569449,0,0.106691729694141,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0.123935764259002,0,0,0,3.20228299314188,0,0,0,0,0,0.205116364240755,0,0,0,0,1.47221577751538,3.18518253038899,0,0.346576998451015,0,0.690359926060101,0.198916222116275,0.0752103283492573,4.23580644277392,0,0,0.163771917510097,5.76638736246476,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,2.88084968889448,0,0,0,2.2456829767954,0.222462803784138,0.156986185701028,0,2.24217730651031,0.913158720509496,0.647782773655864,3.34426181520935,0,0,0.116241425368125,0.695433089210318,0,0,0,0,0,2.95830001826413,2.72682895229305,3.38709640152743,0.68732060563215,2.48165108531456,1.91107787795487,0.111855431797792,3.72970887737923,0,0,0,0,0.485710993059139,1.63757624423474,0.596852325484105,0.118920090777569,4.63078936359736,0,4.0759967763001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| ||
|short_description=p4@HOXB9 | |short_description=p4@HOXB9 | ||
}} | }} |
Latest revision as of 07:38, 25 September 2015
Short description: | p4@HOXB9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXB9_5end |
Coexpression cluster: | NA |
Association with transcript: | -103bp_to_ENST00000311177_5end |
EntrezGene: | HOXB9 |
HGNC: | 5120 |
UniProt: | P17482 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.62e-17 | 10 |
nephron tubule epithelial cell | 4.62e-17 | 10 |
epithelial cell | 2.12e-14 | 253 |
kidney cell | 1.75e-11 | 17 |
kidney epithelial cell | 1.75e-11 | 17 |
epithelial cell of nephron | 1.04e-10 | 15 |
transitional epithelial cell | 2.70e-09 | 4 |
urothelial cell | 2.70e-09 | 4 |
brush border epithelial cell | 1.68e-07 | 3 |
kidney cortex tubule cell | 1.68e-07 | 3 |
epithelial cell of proximal tubule | 1.68e-07 | 3 |
epithelial cell of lung | 1.74e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 1.01e-18 | 47 |
renal system | 3.41e-18 | 48 |
nephron tubule epithelium | 4.62e-17 | 10 |
cavitated compound organ | 1.31e-16 | 31 |
kidney | 6.47e-16 | 26 |
kidney mesenchyme | 6.47e-16 | 26 |
upper urinary tract | 6.47e-16 | 26 |
kidney rudiment | 6.47e-16 | 26 |
kidney field | 6.47e-16 | 26 |
trunk region element | 3.49e-12 | 101 |
excretory tube | 3.63e-12 | 16 |
kidney epithelium | 3.63e-12 | 16 |
urothelium | 5.14e-11 | 5 |
nephron epithelium | 1.04e-10 | 15 |
renal tubule | 1.04e-10 | 15 |
nephron tubule | 1.04e-10 | 15 |
nephron | 1.04e-10 | 15 |
uriniferous tubule | 1.04e-10 | 15 |
nephrogenic mesenchyme | 1.04e-10 | 15 |
transitional epithelium | 4.18e-09 | 6 |
internal genitalia | 1.90e-08 | 25 |
abdominal segment of trunk | 2.85e-08 | 60 |
abdomen | 2.85e-08 | 60 |
abdomen element | 1.08e-07 | 54 |
abdominal segment element | 1.08e-07 | 54 |
subdivision of trunk | 1.19e-07 | 112 |
male genital duct | 1.44e-07 | 3 |
internal male genitalia | 1.44e-07 | 3 |
renal cortex tubule | 1.68e-07 | 3 |
region of nephron tubule | 1.68e-07 | 3 |
proximal tubule | 1.68e-07 | 3 |
respiratory tract epithelium | 1.74e-07 | 19 |
lung epithelium | 1.74e-07 | 19 |
endo-epithelium | 4.10e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.16e-14 | 239 |
cell type cancer | 2.25e-13 | 143 |
cancer | 2.35e-13 | 235 |
carcinoma | 5.35e-13 | 106 |
lung cancer | 5.90e-10 | 15 |
respiratory system cancer | 3.20e-09 | 16 |
squamous cell carcinoma | 1.81e-08 | 14 |
lung carcinoma | 3.12e-08 | 9 |
cervical cancer | 4.06e-07 | 5 |
organ system cancer | 7.59e-07 | 137 |
lung large cell carcinoma | 7.88e-07 | 3 |
non-small cell lung carcinoma | 7.94e-07 | 5 |