FFCP PHASE1:Hg19::chr5:142586545..142586557,+: Difference between revisions
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|id=chr5:142586545..142586557,+
|short_description=p19@ARHGAP26
|description=CAGE_peak_19_at_ARHGAP26_5end
|association_with_transcript=-205bp_to_ENST00000421521_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23092 | |EntrezGene=23092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17073 | |HGNC=17073 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-205bp_to_ENST00000421521_5end | |||
|cluster_id=chr5:142586545..142586557,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_19_at_ARHGAP26_5end | |||
|id=chr5:142586545..142586557,+ | |||
|ontology_enrichment_celltype=CL:0000080!3.78e-22!6;CL:0000945!4.61e-21!24;CL:0000826!4.61e-21!24;CL:0000838!9.40e-17!52;CL:0000542!2.00e-16!53;CL:0000051!2.00e-16!53;CL:0000946!3.66e-15!1;CL:0000786!3.66e-15!1;CL:0000980!3.66e-15!1;CL:0000988!6.19e-10!182;CL:0002087!1.11e-08!119;CL:0002031!2.71e-08!124;CL:0000785!3.08e-08!2;CL:0000955!3.08e-08!2;CL:0000818!3.08e-08!2;CL:0000954!3.08e-08!2;CL:0000816!3.08e-08!2;CL:0000738!3.05e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.97e-11;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.97e-11,24;CL:0000826,1.97e-11,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!1.54e-15!1;DOID:0060061!1.54e-15!1;DOID:8691!1.54e-15!1;DOID:2355!2.06e-15!1;DOID:0060058!2.25e-13!10;DOID:74!2.31e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!1.47e-13!10;UBERON:0000358!1.47e-13!10;UBERON:0000307!1.47e-13!10;UBERON:0000091!1.47e-13!10;UBERON:0000087!1.47e-13!10;UBERON:0007806!1.47e-13!10;UBERON:0008780!1.47e-13!10;UBERON:0005728!1.47e-13!10;UBERON:0000178!3.12e-09!15;UBERON:0000179!3.12e-09!15;UBERON:0000463!3.12e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.77e-26;10!UBERON:0000178;1.34e-17;15!UBERON:0000179;1.34e-17;15!UBERON:0000463;1.34e-17;15!UBERON:0002390;3.18e-14;32!UBERON:0000478;2.75e-11;24!UBERON:0002106;1.14e-10;3!UBERON:0002193;3.41e-07;42!UBERON:0004177;6.58e-07;5!UBERON:0005057;6.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.53e-26,10;UBERON:0000358,5.53e-26,10;UBERON:0000307,5.53e-26,10;UBERON:0000091,5.53e-26,10;UBERON:0000087,5.53e-26,10;UBERON:0007010,5.53e-26,10;UBERON:0007806,5.53e-26,10;UBERON:0008780,5.53e-26,10;UBERON:0005728,5.53e-26,10;UBERON:0000178,1.31e-17,15;UBERON:0000179,1.31e-17,15;UBERON:0000463,1.31e-17,15;UBERON:0000478,2.70e-11,24;UBERON:0002106,1.20e-10,3;UBERON:0004854,1.20e-10,3;UBERON:0009034,1.20e-10,3;UBERON:0002095,1.20e-10,3;UBERON:0004782,1.20e-10,3;UBERON:0003281,1.20e-10,3;UBERON:0009664,1.20e-10,3;UBERON:0002296,1.20e-10,3;UBERON:0005602,1.20e-10,3;UBERON:0001179,1.20e-10,3;UBERON:0006293,1.20e-10,3 | |||
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|short_description=p19@ARHGAP26 | |||
}} | }} |
Latest revision as of 07:40, 25 September 2015
Short description: | p19@ARHGAP26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ARHGAP26_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -205bp_to_ENST00000421521_5end |
EntrezGene: | ARHGAP26 |
HGNC: | 17073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.97e-11 | 24 |
pro-B cell | 1.97e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.53e-26 | 10 |
blastocyst | 5.53e-26 | 10 |
blastula | 5.53e-26 | 10 |
bilaminar disc | 5.53e-26 | 10 |
inner cell mass | 5.53e-26 | 10 |
cleaving embryo | 5.53e-26 | 10 |
connecting stalk | 5.53e-26 | 10 |
inner cell mass derived epiblast | 5.53e-26 | 10 |
extraembryonic mesoderm | 5.53e-26 | 10 |
blood | 1.31e-17 | 15 |
haemolymphatic fluid | 1.31e-17 | 15 |
organism substance | 1.31e-17 | 15 |
extraembryonic structure | 2.70e-11 | 24 |
spleen | 1.20e-10 | 3 |
gastrointestinal system mesentery | 1.20e-10 | 3 |
stomach region | 1.20e-10 | 3 |
mesentery | 1.20e-10 | 3 |
gastrointestinal system serosa | 1.20e-10 | 3 |
mesentery of stomach | 1.20e-10 | 3 |
gut mesentery | 1.20e-10 | 3 |
dorsal mesentery | 1.20e-10 | 3 |
dorsal mesogastrium | 1.20e-10 | 3 |
peritoneal cavity | 1.20e-10 | 3 |
spleen primordium | 1.20e-10 | 3 |