FFCP PHASE1:Mm9::chr19:26679654..26679675,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67155 | |EntrezGene=67155 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F2Z4A9,Q6DIC0 | |UniProt=F2Z4A9,Q6DIC0 | ||
|association_with_transcript=4bp_to_ENSMUST00000025862,NM_011416,uc008hbn.1,uc012bjw.1_5end | |association_with_transcript=4bp_to_ENSMUST00000025862,NM_011416,uc008hbn.1,uc012bjw.1_5end | ||
|cluster_id=chr19:26679654..26679675,+ | |||
|description=CAGE_peak_1_at_Smarca2_5end | |description=CAGE_peak_1_at_Smarca2_5end | ||
|id=chr19:26679654..26679675,+ | |id=chr19:26679654..26679675,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.00e-09!34;UBERON:0001049!7.06e-09!52;UBERON:0005068!7.06e-09!52;UBERON:0006241!7.06e-09!52;UBERON:0007135!7.06e-09!52;UBERON:0002616!6.54e-08!49;UBERON:0002791!7.72e-08!29;UBERON:0003528!7.72e-08!29;UBERON:0001893!7.72e-08!29;UBERON:0000955!8.37e-08!50;UBERON:0006238!8.37e-08!50;UBERON:0000956!9.12e-07!21;UBERON:0001869!9.12e-07!21;UBERON:0000203!9.12e-07!21 | |ontology_enrichment_uberon=UBERON:0002020!1.00e-09!34;UBERON:0001049!7.06e-09!52;UBERON:0005068!7.06e-09!52;UBERON:0006241!7.06e-09!52;UBERON:0007135!7.06e-09!52;UBERON:0002616!6.54e-08!49;UBERON:0002791!7.72e-08!29;UBERON:0003528!7.72e-08!29;UBERON:0001893!7.72e-08!29;UBERON:0000955!8.37e-08!50;UBERON:0006238!8.37e-08!50;UBERON:0000956!9.12e-07!21;UBERON:0001869!9.12e-07!21;UBERON:0000203!9.12e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.99e-10,34;UBERON:0000073,1.13e-09,54;UBERON:0001049,7.05e-09,52;UBERON:0005068,7.05e-09,52;UBERON:0006241,7.05e-09,52;UBERON:0007135,7.05e-09,52;UBERON:0003528,7.71e-08,29;UBERON:0002791,7.71e-08,29;UBERON:0001893,7.71e-08,29;UBERON:0002346,1.82e-07,64;UBERON:0003075,1.82e-07,64;UBERON:0007284,1.82e-07,64;UBERON:0010371,2.03e-07,73;UBERON:0002616,8.60e-07,46;UBERON:0000956,9.11e-07,21;UBERON:0001869,9.11e-07,21;UBERON:0000203,9.11e-07,21 | |||
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| ||
|short_description=p1@Smarca2 | |short_description=p1@Smarca2 | ||
}} | }} |
Latest revision as of 13:47, 25 September 2015
Short description: | p1@Smarca2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Smarca2_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENSMUST00000025862, NM_011416, uc008hbn.1, uc012bjw.1_5end |
EntrezGene: | Smarca2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 9.99e-10 | 34 |
regional part of nervous system | 1.13e-09 | 54 |
neural tube | 7.05e-09 | 52 |
neural rod | 7.05e-09 | 52 |
future spinal cord | 7.05e-09 | 52 |
neural keel | 7.05e-09 | 52 |
brain grey matter | 7.71e-08 | 29 |
regional part of telencephalon | 7.71e-08 | 29 |
telencephalon | 7.71e-08 | 29 |
neurectoderm | 1.82e-07 | 64 |
neural plate | 1.82e-07 | 64 |
presumptive neural plate | 1.82e-07 | 64 |
ecto-epithelium | 2.03e-07 | 73 |
regional part of brain | 8.60e-07 | 46 |
cerebral cortex | 9.11e-07 | 21 |
cerebral hemisphere | 9.11e-07 | 21 |
pallium | 9.11e-07 | 21 |