FFCP PHASE1:Mm9::chr3:67267750..67267865,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17035 | |EntrezGene=17035 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2380 | |MCL_coexpression_id=2380 | ||
|TSSclassifier=NA | |||
|UniProt=P70202,Q14BZ3 | |UniProt=P70202,Q14BZ3 | ||
|association_with_transcript=0bp_to_ENSMUST00000058981,NM_016753,uc008pln.1_5end | |association_with_transcript=0bp_to_ENSMUST00000058981,NM_016753,uc008pln.1_5end | ||
|cluster_id=chr3:67267750..67267865,- | |||
|description=CAGE_peak_1_at_Lxn_5end | |description=CAGE_peak_1_at_Lxn_5end | ||
|id=chr3:67267750..67267865,- | |id=chr3:67267750..67267865,- | ||
|ontology_enrichment_celltype=CL:0000055!1.10e-10!50;CL:0002319!1.78e-08!43;CL:0000221!6.27e-08!44;CL:0000133!6.27e-08!44;CL:0000333!6.83e-08!10;CL:0000095!6.83e-08!10;CL:0000243!6.83e-08!10;CL:0000123!6.83e-08!10;CL:0000125!6.83e-08!10;CL:0000030!6.83e-08!10;CL:0000339!6.83e-08!10 | |ontology_enrichment_celltype=CL:0000055!1.10e-10!50;CL:0002319!1.78e-08!43;CL:0000221!6.27e-08!44;CL:0000133!6.27e-08!44;CL:0000333!6.83e-08!10;CL:0000095!6.83e-08!10;CL:0000243!6.83e-08!10;CL:0000123!6.83e-08!10;CL:0000125!6.83e-08!10;CL:0000030!6.83e-08!10;CL:0000339!6.83e-08!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.78e-08,43;CL:0000221,6.26e-08,44;CL:0000133,6.26e-08,44;CL:0000333,6.83e-08,10;CL:0000095,6.83e-08,10;CL:0000243,6.83e-08,10;CL:0000123,6.83e-08,10;CL:0000125,6.83e-08,10;CL:0000030,6.83e-08,10;CL:0000339,6.83e-08,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.65e-11!75;UBERON:0001016!5.65e-11!75;UBERON:0001017!5.35e-10!73;UBERON:0005743!5.35e-10!73;UBERON:0002048!2.79e-07!14;UBERON:0000117!2.79e-07!14;UBERON:0000171!2.79e-07!14;UBERON:0000170!2.79e-07!14;UBERON:0005597!2.79e-07!14;UBERON:0000118!2.79e-07!14;UBERON:0003076!5.64e-07!12;UBERON:0003057!5.64e-07!12;UBERON:0004121!8.07e-07!102;UBERON:0000924!8.07e-07!102;UBERON:0006601!8.07e-07!102 | |ontology_enrichment_uberon=UBERON:0000073!5.65e-11!75;UBERON:0001016!5.65e-11!75;UBERON:0001017!5.35e-10!73;UBERON:0005743!5.35e-10!73;UBERON:0002048!2.79e-07!14;UBERON:0000117!2.79e-07!14;UBERON:0000171!2.79e-07!14;UBERON:0000170!2.79e-07!14;UBERON:0005597!2.79e-07!14;UBERON:0000118!2.79e-07!14;UBERON:0003076!5.64e-07!12;UBERON:0003057!5.64e-07!12;UBERON:0004121!8.07e-07!102;UBERON:0000924!8.07e-07!102;UBERON:0006601!8.07e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.64e-11,75;UBERON:0001017,5.35e-10,73;UBERON:0002048,2.79e-07,14;UBERON:0000117,2.79e-07,14;UBERON:0000171,2.79e-07,14;UBERON:0000170,2.79e-07,14;UBERON:0005597,2.79e-07,14;UBERON:0000118,2.79e-07,14;UBERON:0004121,3.05e-07,95;UBERON:0000924,3.05e-07,95;UBERON:0006601,3.05e-07,95;UBERON:0003076,5.64e-07,12;UBERON:0003057,5.64e-07,12;UBERON:0000073,8.46e-07,54 | |||
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| ||
|short_description=p1@Lxn | |short_description=p1@Lxn | ||
}} | }} |
Latest revision as of 16:05, 25 September 2015
Short description: | p1@Lxn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lxn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2380 |
Association with transcript: | 0bp_to_ENSMUST00000058981, NM_016753, uc008pln.1_5end |
EntrezGene: | Lxn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.78e-08 | 43 |
ectodermal cell | 6.26e-08 | 44 |
neurectodermal cell | 6.26e-08 | 44 |
migratory neural crest cell | 6.83e-08 | 10 |
neuron associated cell | 6.83e-08 | 10 |
glial cell (sensu Vertebrata) | 6.83e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 6.83e-08 | 10 |
glial cell | 6.83e-08 | 10 |
glioblast | 6.83e-08 | 10 |
glioblast (sensu Vertebrata) | 6.83e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.64e-11 | 75 |
central nervous system | 5.35e-10 | 73 |
lung | 2.79e-07 | 14 |
respiratory tube | 2.79e-07 | 14 |
respiration organ | 2.79e-07 | 14 |
pair of lungs | 2.79e-07 | 14 |
lung primordium | 2.79e-07 | 14 |
lung bud | 2.79e-07 | 14 |
ectoderm-derived structure | 3.05e-07 | 95 |
ectoderm | 3.05e-07 | 95 |
presumptive ectoderm | 3.05e-07 | 95 |
posterior neural tube | 5.64e-07 | 12 |
chordal neural plate | 5.64e-07 | 12 |
regional part of nervous system | 8.46e-07 | 54 |