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FFCP PHASE1:Mm9::chr5:17282593..17282616,-: Difference between revisions

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{{FFCP|EntrezGene=100628584|HGNC=|MCL_coexpression_id=203|UniProt=|association_with_transcript=36bp_to_ENSMUST00000175596,NR_039569_5end|description=CAGE_peak_1_at_Mir5109_5end|id=chr5:17282593..17282616,-|ontology_enrichment_celltype=CL:0002319!2.09e-14!43;CL:0000055!7.08e-14!50;CL:0002371!1.45e-13!118;CL:0000221!1.47e-13!44;CL:0000133!1.47e-13!44;CL:0000723!2.74e-13!91;CL:0000048!2.74e-13!91;CL:0000548!2.74e-13!115;CL:0000004!2.74e-13!115;CL:0000255!2.74e-13!115;CL:0002321!3.09e-12!70;CL:0000220!3.09e-12!70;CL:0000144!5.09e-12!121;CL:0000012!5.09e-12!121;CL:0000034!1.22e-11!97;CL:0000540!1.25e-11!33;CL:0000047!1.25e-11!33;CL:0000031!1.25e-11!33;CL:0000404!1.25e-11!33;CL:0000393!1.47e-10!39;CL:0000211!1.47e-10!39;CL:0000117!6.84e-09!23;CL:0000337!6.84e-09!23;CL:0000219!9.82e-07!54|ontology_enrichment_celltype_v019_2=CL:0002319,1.94e-14,43;CL:0000221,1.37e-13,44;CL:0000133,1.37e-13,44;CL:0000723,2.02e-13,91;CL:0000048,2.02e-13,91;CL:0002321,2.35e-12,70;CL:0000034,8.95e-12,97;CL:0000540,1.18e-11,33;CL:0000047,1.18e-11,33;CL:0000031,1.18e-11,33;CL:0000404,1.18e-11,33;CL:0000393,1.39e-10,39;CL:0000211,1.39e-10,39;CL:0000117,6.55e-09,23;CL:0000337,6.55e-09,23;CL:0000219,7.99e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.46e-12!73;UBERON:0005743!5.46e-12!73;UBERON:0000073!9.87e-12!75;UBERON:0001016!9.87e-12!75;UBERON:0002020!1.83e-07!34;UBERON:0004121!4.23e-07!102;UBERON:0000924!4.23e-07!102;UBERON:0006601!4.23e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.15e-12,73;UBERON:0001016,9.32e-12,75;UBERON:0004121,3.68e-08,95;UBERON:0000924,3.68e-08,95;UBERON:0006601,3.68e-08,95;UBERON:0002020,1.56e-07,34;UBERON:0000073,8.01e-07,54|phase1_expression=1.28119077683835,2.79180326111489,1.36499771816861,22.9872800593191,17.5313505481222,1.34303417529512,10.7461814673942,6.19791952519566,4.78681655315667,7.0219357896598,2.39705155515707,1.91453181588807,3.42401459862411,2.79745287740792,6.32908547449759,1.82227740650843,7.69518065940961,3.78554598429885,1.50825876966313,5.94145512517242,5.78294373027274,2.87943758482567,2.87319768052829,3.51983330145495,3.67054849707472,0.57423196411502,1.7230479846363,0.861884930743556,4.56056206695297,0.504060259519861,0.443461021310609,46.3572391625531,19.0670084151217,142.633512913895,1.1554064790051,0.664938581433969,1.02084678131185,3.76678467663217,2.3440060335714,3.66466620781659,3.52938892818609,3.41522742479223,0.971020706062307,2.01434908760924,3.14268486780495,2.0190142737785,22.6893489860931,2.39827672018491,13.1811709640683,5.44403717407994,8.39918529752175,14.3752564364972,2.68452169692378,2.17608642603403,2.35265659399725,3.34437266846731,2.0057340795713,4.12537673821954,6.27181028664753,6.34789175126439,4.43681982454325,11.8595586224196,9.78224275722253,21.5975932147536,22.7439263390404,29.8401648277362,20.0732074047331,9.60545763303886,6.73982480005105,7.42532660824299,5.8890989178387,6.28432165688368,5.07997644188711,5.75706756310284,6.70918297127655,3.67687514644008,18.7196997698961,6.38436690425939,7.37311359629969,6.06676923558892,5.39777097254217,4.68822033501084,7.53794097303729,8.4414391504752,9.47349136216223,16.2045722010517,7.68807076315156,5.40558392893372,2.34751199332871,2.34271836331035,3.47837386442013,9.46466264679525,11.5595126730318,10.7940638327563,37.0372557945171,13.4408066129201,1.40444420131752,1.02258193546835,5.45550609666024,3.88673531961374,1.12674735821344,5.13305909657271,10.1922095882658,0,1.94841936910093,2.53359865475099,1.51657333504435,7.65031994117702,0.517875767294343,1.48442139064825,4.3371331691534,1.21786191324856,2.07553947530453,1.05505848386836,1.99900802130698,2.13633205260448,2.47194967734374,1.01219549843938,0.884610551949874,1.61766849947409,1.10420759230197,4.84875253135222,5.59175283654366,0.878342391034642,3.77004072264219,3.57639877292028,0.958520996047362,0,1.14363204365758,1.19832511523858,0.457500602818626,1.00523481690292,2.25971616249959,1.27857728665165,2.0778804455956,0.811206315338788,0.916554274652847,1.7416975885413,1.51633655060205,3.36706969418358,1.43132487258974,1.37941262660084,1.26043490863744,1.9591626318643,2.24520447199382,1.0249097622788,0.749613796477831,3.3631438196072,1.29340795759705,3.02569728268511,1.05570674498369,0.876782929710299,3.89266148915837,1.74126083261083,1.85203922767149,2.7864797354589,0.702213187313235,0,1.42081749697796,1.03562886267751,2.11073453982987,7.38254451990161,1.42046841351126,1.96764231747404,1.69693824176116,3.72054311600653,1.07309360559848,1.98501082024188,1.48103864922132,1.80584210487005,2.26992666728396,3.07019973593198,3.95190207523891,2.68412837520744,2.10289948564127,2.05809224758569,8.92130714056255,2.90895623329899,1.70630600428187,2.55460339046482,1.15980715189884,1.4117846723634,0.444756087689741,0.951128130562796,21.353807769503,1.81168850196412,5.52937459360593,2.58643413653496,2.72949721966768,19.7740269903929,4.97117514711797,2.58883655230677,1.51734320762465,2.3992187648043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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=100628584
|HGNC=
|MCL_coexpression_id=203
|TSSclassifier=NA
|UniProt=
|association_with_transcript=36bp_to_ENSMUST00000175596,NR_039569_5end
|cluster_id=chr5:17282593..17282616,-
|description=CAGE_peak_1_at_Mir5109_5end
|id=chr5:17282593..17282616,-
|ontology_enrichment_celltype=CL:0002319!2.09e-14!43;CL:0000055!7.08e-14!50;CL:0002371!1.45e-13!118;CL:0000221!1.47e-13!44;CL:0000133!1.47e-13!44;CL:0000723!2.74e-13!91;CL:0000048!2.74e-13!91;CL:0000548!2.74e-13!115;CL:0000004!2.74e-13!115;CL:0000255!2.74e-13!115;CL:0002321!3.09e-12!70;CL:0000220!3.09e-12!70;CL:0000144!5.09e-12!121;CL:0000012!5.09e-12!121;CL:0000034!1.22e-11!97;CL:0000540!1.25e-11!33;CL:0000047!1.25e-11!33;CL:0000031!1.25e-11!33;CL:0000404!1.25e-11!33;CL:0000393!1.47e-10!39;CL:0000211!1.47e-10!39;CL:0000117!6.84e-09!23;CL:0000337!6.84e-09!23;CL:0000219!9.82e-07!54
|ontology_enrichment_celltype_v019_2=CL:0002319,1.94e-14,43;CL:0000221,1.37e-13,44;CL:0000133,1.37e-13,44;CL:0000723,2.02e-13,91;CL:0000048,2.02e-13,91;CL:0002321,2.35e-12,70;CL:0000034,8.95e-12,97;CL:0000540,1.18e-11,33;CL:0000047,1.18e-11,33;CL:0000031,1.18e-11,33;CL:0000404,1.18e-11,33;CL:0000393,1.39e-10,39;CL:0000211,1.39e-10,39;CL:0000117,6.55e-09,23;CL:0000337,6.55e-09,23;CL:0000219,7.99e-07,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.46e-12!73;UBERON:0005743!5.46e-12!73;UBERON:0000073!9.87e-12!75;UBERON:0001016!9.87e-12!75;UBERON:0002020!1.83e-07!34;UBERON:0004121!4.23e-07!102;UBERON:0000924!4.23e-07!102;UBERON:0006601!4.23e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.15e-12,73;UBERON:0001016,9.32e-12,75;UBERON:0004121,3.68e-08,95;UBERON:0000924,3.68e-08,95;UBERON:0006601,3.68e-08,95;UBERON:0002020,1.56e-07,34;UBERON:0000073,8.01e-07,54
|phase1_expression=1.28119077683835,2.79180326111489,1.36499771816861,22.9872800593191,17.5313505481222,1.34303417529512,10.7461814673942,6.19791952519566,4.78681655315667,7.0219357896598,2.39705155515707,1.91453181588807,3.42401459862411,2.79745287740792,6.32908547449759,1.82227740650843,7.69518065940961,3.78554598429885,1.50825876966313,5.94145512517242,5.78294373027274,2.87943758482567,2.87319768052829,3.51983330145495,3.67054849707472,0.57423196411502,1.7230479846363,0.861884930743556,4.56056206695297,0.504060259519861,0.443461021310609,46.3572391625531,19.0670084151217,142.633512913895,1.1554064790051,0.664938581433969,1.02084678131185,3.76678467663217,2.3440060335714,3.66466620781659,3.52938892818609,3.41522742479223,0.971020706062307,2.01434908760924,3.14268486780495,2.0190142737785,22.6893489860931,2.39827672018491,13.1811709640683,5.44403717407994,8.39918529752175,14.3752564364972,2.68452169692378,2.17608642603403,2.35265659399725,3.34437266846731,2.0057340795713,4.12537673821954,6.27181028664753,6.34789175126439,4.43681982454325,11.8595586224196,9.78224275722253,21.5975932147536,22.7439263390404,29.8401648277362,20.0732074047331,9.60545763303886,6.73982480005105,7.42532660824299,5.8890989178387,6.28432165688368,5.07997644188711,5.75706756310284,6.70918297127655,3.67687514644008,18.7196997698961,6.38436690425939,7.37311359629969,6.06676923558892,5.39777097254217,4.68822033501084,7.53794097303729,8.4414391504752,9.47349136216223,16.2045722010517,7.68807076315156,5.40558392893372,2.34751199332871,2.34271836331035,3.47837386442013,9.46466264679525,11.5595126730318,10.7940638327563,37.0372557945171,13.4408066129201,1.40444420131752,1.02258193546835,5.45550609666024,3.88673531961374,1.12674735821344,5.13305909657271,10.1922095882658,0,1.94841936910093,2.53359865475099,1.51657333504435,7.65031994117702,0.517875767294343,1.48442139064825,4.3371331691534,1.21786191324856,2.07553947530453,1.05505848386836,1.99900802130698,2.13633205260448,2.47194967734374,1.01219549843938,0.884610551949874,1.61766849947409,1.10420759230197,4.84875253135222,5.59175283654366,0.878342391034642,3.77004072264219,3.57639877292028,0.958520996047362,0,1.14363204365758,1.19832511523858,0.457500602818626,1.00523481690292,2.25971616249959,1.27857728665165,2.0778804455956,0.811206315338788,0.916554274652847,1.7416975885413,1.51633655060205,3.36706969418358,1.43132487258974,1.37941262660084,1.26043490863744,1.9591626318643,2.24520447199382,1.0249097622788,0.749613796477831,3.3631438196072,1.29340795759705,3.02569728268511,1.05570674498369,0.876782929710299,3.89266148915837,1.74126083261083,1.85203922767149,2.7864797354589,0.702213187313235,0,1.42081749697796,1.03562886267751,2.11073453982987,7.38254451990161,1.42046841351126,1.96764231747404,1.69693824176116,3.72054311600653,1.07309360559848,1.98501082024188,1.48103864922132,1.80584210487005,2.26992666728396,3.07019973593198,3.95190207523891,2.68412837520744,2.10289948564127,2.05809224758569,8.92130714056255,2.90895623329899,1.70630600428187,2.55460339046482,1.15980715189884,1.4117846723634,0.444756087689741,0.951128130562796,21.353807769503,1.81168850196412,5.52937459360593,2.58643413653496,2.72949721966768,19.7740269903929,4.97117514711797,2.58883655230677,1.51734320762465,2.39921876480431,0,1.01825663922657,0.969762435838129,1.40271639780637,1.83385957660346,2.36176236767363,0.627994911365499,2.22114895059241,7.41131567717872,0.667380422864376,0.589676985339609,1.34917267430912,1.42002084971952,1.4470629585145,1.78238096246994,2.30156909960649,3.89124544260085,1.92192989231657,81.9478777205921,5.20997326735905,5.92871578917665,1.51547326768267,4.4849353380478,3.85954817090694,2.40179147216586,1.51593129416388,0.651859905768103,3.56464680127895,1.87752198630802,1.00503754465089,0.952174563544055,2.53673742215138,2.04925687338048,2.6575762757853,3.50800491046472,6.882259218061,3.45369963731791,3.61622646453779,4.52373851817817,7.61467957346193,0.983528546038072,2.75936746304733,1.44495530989013,2.69586879162067,10.9836413402373,4.29200576247434,7.57219726599016,10.5418460960092,6.46270193198397,4.54040716109849,7.12955757063661,13.0215204162863,9.71545684019746,5.55286130031493,6.7198922250909,2.24924921495265,0.99358059645788,2.49291845134157,0.977321756121456,2.3095817216155,9.2921596837974,2.91336763385978,0.906970670894253,1.69744571780308,2.36241514304618,5.22639751504677,3.6179961043551,9.08834323693764,7.12994756769443,2.52829406348653,26.3546521437497,18.5643977846736,2.04263763452273,2.88097750450096,2.58717367565509,3.64372959553707,2.12808280370728,2.67553226403106,3.45552943264454,9.13394847343798,1.17335854031855,2.33015277950202,2.64634077665954,3.46261131177108,1.93757312035087,1.44751019827574,2.50681922406587,6.07321329056727,6.41257840585672,3.33765543618917,5.63873906632914,0.619160603889667,2.03713980106683,3.39063222608444,1.6403307326523,3.20289442489132,0.509935289981566,0.839708713941948,1.24379976423981,0,1.89801596148681,0.813277868507395,2.16010681643603,2.92723614420256,2.40198820120795,2.83215127408124,2.47960367176008,6.54389854960074,2.46268449254406,3.72803587852155,8.45539408026285,1.19613236835183,2.48187735685646,0.972255941720238,2.32487682259916,1.68956125490778,2.46450201156083,2.0832701575032,0.734015410979976,2.41584120826006,0.864090018773596,0,2.8381530140623,3.18403967210964,1.16928740680016,1.25318686967237,0,0.961563596159751,1.18151621739662,1.51449674922221,0.838274873204998,0.907435666231565,1.16949456887703,0.769694733122636,0.935015217452552,1.81384306892169,1.99787358036658,3.76798197759798,3.35769232728157,1.35232715822533,2.25218970541418,1.46521299413812,3.00115730710692,2.50786052017682,5.0827665835536,4.60325236507177,6.87474616127276,6.70227411140382,6.16574267793578,7.55393897389701,7.42524750254986,5.85417564191487,2.71885445390523,4.65984280576638,1.97195960409936,1.59609949360412,0.512200817262403,2.43106717068294,1.67690530102386,2.94149613520023,2.889207461421,2.47242068686673,2.24643446714271,1.26348605881899,3.04175159868288,1.69763707247469,2.99652823903624,1.79270426733634,3.21638626151434,0,1.27472758539341,2.31491064556446,0.824171801606613,0.294397840268795,1.71434626192708,1.4198064492747,0.238436189947321,2.0348498328526,1.31753132581463,1.52306294205018,1.64635175585495,1.57841826862706,3.93831930152999,0.561142271657738,1.42362021749009,2.1670986122624,1.22769312950907,1.54936841185966,1.54325288784913,1.74867404556562,1.87145286756327,1.50409737833809,0.57386499620653,2.20591419119516,5.33296021926969
|short_description=p1@Mir5109
}}

Latest revision as of 19:28, 25 September 2015

Short description:p1@Mir5109
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mir5109_5end
Coexpression cluster:MCL_coexpression_mm9:203
Association with transcript: 36bp_to_ENSMUST00000175596, NR_039569_5end
EntrezGene:Mir5109
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mir5109

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.99
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B94.56
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I346.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G619.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9142.63
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B722.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.18
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.86
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C721.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D229.84
Mouse Microglia, donor1.CNhs12629.11718-123C820.07
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F437.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.65
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I97.38
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D121.35
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D119.77
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A881.95
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H14.48
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A46.88
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C46.07
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.94e-1443
ectodermal cell1.37e-1344
neurectodermal cell1.37e-1344
somatic stem cell2.02e-1391
multi fate stem cell2.02e-1391
embryonic cell2.35e-1270
stem cell8.95e-1297
neuron1.18e-1133
neuronal stem cell1.18e-1133
neuroblast1.18e-1133
electrically signaling cell1.18e-1133
electrically responsive cell1.39e-1039
electrically active cell1.39e-1039
CNS neuron (sensu Vertebrata)6.55e-0923
neuroblast (sensu Vertebrata)6.55e-0923
motile cell7.99e-0754

Uber anatomy
Ontology termp-valuen
central nervous system5.15e-1273
nervous system9.32e-1275
ectoderm-derived structure3.68e-0895
ectoderm3.68e-0895
presumptive ectoderm3.68e-0895
gray matter1.56e-0734
regional part of nervous system8.01e-0754
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