FFCP PHASE2:Mm9::chr16:91269972..91269978,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:50914 |HGNC= |MCL_coexpression_id=519 |TSSclassifier=NA |UniProt=uniprot:Q9JKN5,uniprot:Q3UN59 |association_with_tr...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=50914 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=519 | |MCL_coexpression_id=519 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q9JKN5,Q3UN59 | ||
|association_with_transcript=-35bp_to_ENSMUST00000056882,NM_016968,uc007zxf.1_5end | |association_with_transcript=-35bp_to_ENSMUST00000056882,NM_016968,uc007zxf.1_5end | ||
|cluster_id=chr16:91269972..91269978,+ | |cluster_id=chr16:91269972..91269978,+ | ||
Latest revision as of 20:20, 25 September 2015
| Short description: | p3@Olig1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Olig1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:519 |
| Association with transcript: | -35bp_to_ENSMUST00000056882, NM_016968, uc007zxf.1_5end |
| EntrezGene: | Olig1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p3@Olig1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 1.13e-15 | 43 |
| ectodermal cell | 3.06e-15 | 44 |
| neurectodermal cell | 3.06e-15 | 44 |
| oligodendrocyte precursor cell | 6.18e-14 | 8 |
| CNS neuron (sensu Vertebrata) | 5.05e-12 | 23 |
| neuroblast (sensu Vertebrata) | 5.05e-12 | 23 |
| migratory neural crest cell | 5.02e-11 | 10 |
| neuron associated cell | 5.02e-11 | 10 |
| glial cell (sensu Vertebrata) | 5.02e-11 | 10 |
| neuron associated cell (sensu Vertebrata) | 5.02e-11 | 10 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 1.65e-31 | 73 |
| nervous system | 1.54e-30 | 75 |
| regional part of nervous system | 3.43e-26 | 54 |
| ectoderm-derived structure | 4.44e-23 | 95 |
| ectoderm | 4.44e-23 | 95 |
| presumptive ectoderm | 4.44e-23 | 95 |
| neural tube | 2.42e-22 | 52 |
| neural rod | 2.42e-22 | 52 |
| future spinal cord | 2.42e-22 | 52 |
| neural keel | 2.42e-22 | 52 |
Showing 1 to 10 of 56 entries
