Personal tools

FFCP PHASE1:Mm9::chr11:87391886..87391972,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18952
|EntrezGene=18952
|HGNC=
|HGNC=
|MCL_coexpression_id=1589
|TSSclassifier=NA
|UniProt=P28661
|UniProt=P28661
|association_with_transcript=0bp_to_ENSMUST00000107962,ENSMUST00000122067,ENSMUST00000123081,ENSMUST00000132723,ENSMUST00000133638,ENSMUST00000140398,uc007kts.1,uc007ktt.1,uc007ktu.1_5end
|association_with_transcript=0bp_to_ENSMUST00000107962,ENSMUST00000122067,ENSMUST00000123081,ENSMUST00000132723,ENSMUST00000133638,ENSMUST00000140398,uc007kts.1,uc007ktt.1,uc007ktu.1_5end
|cluster_id=chr11:87391886..87391972,+
|description=CAGE_peak_1_at_Sept4_5end
|description=CAGE_peak_1_at_Sept4_5end
|id=chr11:87391886..87391972,+
|id=chr11:87391886..87391972,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!6.37e-12!114;UBERON:0004111!1.29e-10!122;UBERON:0000033!1.60e-08!63;UBERON:0000955!2.15e-08!50;UBERON:0006238!2.15e-08!50;UBERON:0000468!3.75e-08!333;UBERON:0002346!4.04e-08!71;UBERON:0003075!4.04e-08!71;UBERON:0007284!4.04e-08!71;UBERON:0002616!5.84e-08!49;UBERON:0001049!1.09e-07!52;UBERON:0005068!1.09e-07!52;UBERON:0006241!1.09e-07!52;UBERON:0007135!1.09e-07!52;UBERON:0001017!8.32e-07!73;UBERON:0005743!8.32e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0000025,5.34e-12,114;UBERON:0004111,1.10e-10,122;UBERON:0010314,4.07e-10,92;UBERON:0000073,1.10e-08,54;UBERON:0002346,4.65e-08,64;UBERON:0003075,4.65e-08,64;UBERON:0007284,4.65e-08,64;UBERON:0001049,1.04e-07,52;UBERON:0005068,1.04e-07,52;UBERON:0006241,1.04e-07,52;UBERON:0007135,1.04e-07,52;UBERON:0000955,5.87e-07,47;UBERON:0006238,5.87e-07,47;UBERON:0001017,7.99e-07,73;UBERON:0010371,9.77e-07,73
|phase1_expression=6.40595388419176,0,0,0,0,0,0,1.03298658753261,0,0,0.171217968225505,0,0.171200729931206,1.04904482902797,1.66554880907831,3.44207954562704,5.59649502502517,0.788655413395594,0.959801035240171,0.42438965179803,38.5246104384346,0.496454756004426,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0.380046838912748,0.504060259519861,0.221730510655305,26.0362576118449,18.4519436275371,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0,0,0,3.77690453926732,3.14268486780495,5.13930906052708,2.34717403304412,25.7269684528927,28.1198313900124,11.8602238435313,12.3188051030319,28.7505128729943,0.503347818173209,0,0.672187598284928,6.94600477297057,52.7221529487312,34.0343580903112,8.49729135610311,7.93486468908049,8.23980824558033,5.42151251310611,2.66788438833342,0.449949858640699,0,0,6.89080254192331,13.0634223809329,4.14758449233911,4.59020190327748,5.04779907243317,39.1341848633211,27.8294361599033,4.65465037016825,4.12135525378416,7.35375029288017,147.555280539181,141.349883260303,139.781945263182,8.04506355154182,7.95942499340964,7.8137005583514,164.159603412812,95.1068810953539,103.4444137449,15.0260578591571,12.8134512719193,7.82877672466262,0.530083353332288,0.982430281388212,35.943196599008,59.3692475117157,0,1.61910957491345,5.19821133958135,1.34408066129201,15.0275529540974,0.511290967734173,0.259786004602869,0.35333957451034,7.88723150749411,0,0,0,0,0.253359865475099,0,10.8474685733107,7.76813650941515,22.1178787206589,5.55153045651635,10.6562917409249,8.30215790121811,10.399862198131,8.58397562090645,18.7243221081216,35.1016854182811,10.5557530551536,7.96149496754887,13.1031148457401,13.9130156630048,12.6067565815158,5.59175283654366,97.4960054048452,138.025379790067,11.7510245395952,0.239630249011841,0,0.508280908292259,100.809100319446,73.6575970537989,5.78010019719176,53.0164176586443,54.4673924113604,106.179690769935,92.9642437378251,11.8133662066367,13.8091737377203,4.54900965180614,14.0996043443938,5.59517904739626,7.81667155073808,12.4242869565691,15.2211866014072,18.9141467640691,16.1423287558911,19.1151518101847,42.1686494304596,1.72454394346274,3.02569728268511,4.75068035242662,5.47989331068937,6.67313398141435,7.66154766348766,6.99659263787008,7.16523360546575,0.702213187313235,0,0,4.34964122324554,5.62862543954631,5.22179978236943,7.33908680314152,12.0026181365916,9.41029388613007,16.9749779667798,14.4867636755794,20.4339349142547,15.7977455916941,41.370200947932,39.3994414392859,42.251796365921,36.4453191383144,47.3748658224112,51.7313273467753,10.7020796874456,1.65209391491899,5.81791246659797,1.91959425481711,3.25131340604614,5.15469845288373,11.8993279527772,11.3412802360884,11.7939888189787,16.1339880925134,14.1641101062649,16.5881237808178,20.2935601481974,19.6913727990311,18.8752075817387,14.0489732418551,13.9398891278057,8.91439134479484,10.2823661348756,13.5249282807697,15.6811522440892,25.6017283061266,32.6832920688884,34.7800954183415,30.407690483798,31.7137430239577,34.4278087341823,9.19003143970162,3.00321190288969,4.52085688760367,5.39669069723649,5.27436315610108,6.75296047306767,9.67578236769395,10.9324532231308,10.5387897403773,11.2570179407113,11.5014565221884,16.7463426450827,19.9704110793319,15.6598904327209,13.4548060141434,18.332853811808,90.5290631816363,3.03186258832776,9.28900365719548,13.4098617762399,24.6424760702927,53.602002381381,78.0783142106125,86.4442060010049,107.822438568635,117.819214893148,154.352216060448,140.758587340819,151.790099060122,152.749405862076,0,0,12.2941068254759,10.4855963595798,141.926721549208,161.517704124056,0,30.0440403373204,6.62567260774139,11.7131623288992,3.23135096599198,3.58453196928828,5.34716817797746,3.11384183867716,2.83367491172426,4.9683495844923,4.34816555741176,58.4804795887689,8.94222536812092,8.90328018336276,9.28455668315384,7.4236555337641,1.32745138339963,3.15614827001476,3.62788268357701,7.16699303072413,10.0402643579463,8.30074899448604,16.7978390559344,11.6330793432802,9.9819265947722,9.48110273807448,4.21674434299995,4.12542172992747,18.7241783164583,3.6012218806262,4.13947788104814,4.50107773566344,5.67488747655275,6.42127743367454,9.21474515371877,10.656273219011,13.3762873596315,101.891226085498,1.7642271844397,4.9465875882444,10.4951877352339,5.12659861889325,3.81991500810037,4.76008609260678,18.3632927076806,144.260884964177,9.7396402054776,13.2087595496462,32.2238477623298,15.0694765603753,9.97867862363484,16.2432502976631,0.849892149969277,1.11961161858926,1.65839968565309,1.90934123603023,1.58167996790568,4.26970880966382,5.07625101862466,8.99079672862215,6.76923947613151,9.17077555416781,11.4888303458217,11.2555055053133,12.9614973291793,4.97071450469541,1.69107881605257,7.47582730219894,6.9492565991981,5.05573089694524,5.03723311563151,4.89972763923257,5.04636126176742,3.6457227756306,4.50895181030557,2.89900944991207,3.74439008135225,5.68820017130721,4.86540516696394,6.36807934421929,5.3267537420896,6.44496104402933,4.96703386953162,3.36547258655913,5.46451250545936,4.03865799792591,5.56309688581499,5.44461399738939,5.06780979846713,5.19543944857779,8.18138315270983,8.61575457737803,30.6340615656209,11.0348043629655,28.0367309328011,25.3078368182169,6.94425159169373,4.76194223094889,3.21552568618599,3.00943262421218,37.2736216127264,33.1434170285167,37.8111038870002,24.4031518928036,50.0110239432569,60.431511791176,47.2515750162264,53.5882231836822,55.283373896073,48.6694693046711,1.764384908931,4.38927360741134,5.63420898988643,8.75184181445858,10.0614318061432,15.6266982182512,19.3354653187405,19.1612603232172,12.8367683836726,15.1618327058278,19.010947491768,16.7877443833608,18.6346599865066,16.5184893204563,18.6090919416187,18.0991602687568,21.9021376035777,20.6412865896164,17.3076078337389,19.5774563778748,20.9150243955103,14.9079677173843,18.3595866259437,16.7148379127178,16.0927040510215,16.3306193230936,17.9269413415317,15.5211129748327,18.8767718245748,11.7839877048125,17.4393476642536,18.2233292394792,18.415396942636,17.5078630540142,15.4325288784913,10.9916654292696,17.0770074165148,12.6773921888496,26.5890781575692,20.7355933972345,22.2593122195605
|phase1_expression=6.40595388419176,0,0,0,0,0,0,1.03298658753261,0,0,0.171217968225505,0,0.171200729931206,1.04904482902797,1.66554880907831,3.44207954562704,5.59649502502517,0.788655413395594,0.959801035240171,0.42438965179803,38.5246104384346,0.496454756004426,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0,0.380046838912748,0.504060259519861,0.221730510655305,26.0362576118449,18.4519436275371,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,0,0,0,3.77690453926732,3.14268486780495,5.13930906052708,2.34717403304412,25.7269684528927,28.1198313900124,11.8602238435313,12.3188051030319,28.7505128729943,0.503347818173209,0,0.672187598284928,6.94600477297057,52.7221529487312,34.0343580903112,8.49729135610311,7.93486468908049,8.23980824558033,5.42151251310611,2.66788438833342,0.449949858640699,0,0,6.89080254192331,13.0634223809329,4.14758449233911,4.59020190327748,5.04779907243317,39.1341848633211,27.8294361599033,4.65465037016825,4.12135525378416,7.35375029288017,147.555280539181,141.349883260303,139.781945263182,8.04506355154182,7.95942499340964,7.8137005583514,164.159603412812,95.1068810953539,103.4444137449,15.0260578591571,12.8134512719193,7.82877672466262,0.530083353332288,0.982430281388212,35.943196599008,59.3692475117157,0,1.61910957491345,5.19821133958135,1.34408066129201,15.0275529540974,0.511290967734173,0.259786004602869,0.35333957451034,7.88723150749411,0,0,0,0,0.253359865475099,0,10.8474685733107,7.76813650941515,22.1178787206589,5.55153045651635,10.6562917409249,8.30215790121811,10.399862198131,8.58397562090645,18.7243221081216,35.1016854182811,10.5557530551536,7.96149496754887,13.1031148457401,13.9130156630048,12.6067565815158,5.59175283654366,97.4960054048452,138.025379790067,11.7510245395952,0.239630249011841,0,0.508280908292259,100.809100319446,73.6575970537989,5.78010019719176,53.0164176586443,54.4673924113604,106.179690769935,92.9642437378251,11.8133662066367,13.8091737377203,4.54900965180614,14.0996043443938,5.59517904739626,7.81667155073808,12.4242869565691,15.2211866014072,18.9141467640691,16.1423287558911,19.1151518101847,42.1686494304596,1.72454394346274,3.02569728268511,4.75068035242662,5.47989331068937,6.67313398141435,7.66154766348766,6.99659263787008,7.16523360546575,0.702213187313235,0,0,4.34964122324554,5.62862543954631,5.22179978236943,7.33908680314152,12.0026181365916,9.41029388613007,16.9749779667798,14.4867636755794,20.4339349142547,15.7977455916941,41.370200947932,39.3994414392859,42.251796365921,36.4453191383144,47.3748658224112,51.7313273467753,10.7020796874456,1.65209391491899,5.81791246659797,1.91959425481711,3.25131340604614,5.15469845288373,11.8993279527772,11.3412802360884,11.7939888189787,16.1339880925134,14.1641101062649,16.5881237808178,20.2935601481974,19.6913727990311,18.8752075817387,14.0489732418551,13.9398891278057,8.91439134479484,10.2823661348756,13.5249282807697,15.6811522440892,25.6017283061266,32.6832920688884,34.7800954183415,30.407690483798,31.7137430239577,34.4278087341823,9.19003143970162,3.00321190288969,4.52085688760367,5.39669069723649,5.27436315610108,6.75296047306767,9.67578236769395,10.9324532231308,10.5387897403773,11.2570179407113,11.5014565221884,16.7463426450827,19.9704110793319,15.6598904327209,13.4548060141434,18.332853811808,90.5290631816363,3.03186258832776,9.28900365719548,13.4098617762399,24.6424760702927,53.602002381381,78.0783142106125,86.4442060010049,107.822438568635,117.819214893148,154.352216060448,140.758587340819,151.790099060122,152.749405862076,0,0,12.2941068254759,10.4855963595798,141.926721549208,161.517704124056,0,30.0440403373204,6.62567260774139,11.7131623288992,3.23135096599198,3.58453196928828,5.34716817797746,3.11384183867716,2.83367491172426,4.9683495844923,4.34816555741176,58.4804795887689,8.94222536812092,8.90328018336276,9.28455668315384,7.4236555337641,1.32745138339963,3.15614827001476,3.62788268357701,7.16699303072413,10.0402643579463,8.30074899448604,16.7978390559344,11.6330793432802,9.9819265947722,9.48110273807448,4.21674434299995,4.12542172992747,18.7241783164583,3.6012218806262,4.13947788104814,4.50107773566344,5.67488747655275,6.42127743367454,9.21474515371877,10.656273219011,13.3762873596315,101.891226085498,1.7642271844397,4.9465875882444,10.4951877352339,5.12659861889325,3.81991500810037,4.76008609260678,18.3632927076806,144.260884964177,9.7396402054776,13.2087595496462,32.2238477623298,15.0694765603753,9.97867862363484,16.2432502976631,0.849892149969277,1.11961161858926,1.65839968565309,1.90934123603023,1.58167996790568,4.26970880966382,5.07625101862466,8.99079672862215,6.76923947613151,9.17077555416781,11.4888303458217,11.2555055053133,12.9614973291793,4.97071450469541,1.69107881605257,7.47582730219894,6.9492565991981,5.05573089694524,5.03723311563151,4.89972763923257,5.04636126176742,3.6457227756306,4.50895181030557,2.89900944991207,3.74439008135225,5.68820017130721,4.86540516696394,6.36807934421929,5.3267537420896,6.44496104402933,4.96703386953162,3.36547258655913,5.46451250545936,4.03865799792591,5.56309688581499,5.44461399738939,5.06780979846713,5.19543944857779,8.18138315270983,8.61575457737803,30.6340615656209,11.0348043629655,28.0367309328011,25.3078368182169,6.94425159169373,4.76194223094889,3.21552568618599,3.00943262421218,37.2736216127264,33.1434170285167,37.8111038870002,24.4031518928036,50.0110239432569,60.431511791176,47.2515750162264,53.5882231836822,55.283373896073,48.6694693046711,1.764384908931,4.38927360741134,5.63420898988643,8.75184181445858,10.0614318061432,15.6266982182512,19.3354653187405,19.1612603232172,12.8367683836726,15.1618327058278,19.010947491768,16.7877443833608,18.6346599865066,16.5184893204563,18.6090919416187,18.0991602687568,21.9021376035777,20.6412865896164,17.3076078337389,19.5774563778748,20.9150243955103,14.9079677173843,18.3595866259437,16.7148379127178,16.0927040510215,16.3306193230936,17.9269413415317,15.5211129748327,18.8767718245748,11.7839877048125,17.4393476642536,18.2233292394792,18.415396942636,17.5078630540142,15.4325288784913,10.9916654292696,17.0770074165148,12.6773921888496,26.5890781575692,20.7355933972345,22.2593122195605
|short_description=p1@Sept4
|short_description=p1@Sept4
}}
}}

Latest revision as of 22:04, 25 September 2015

Short description:p1@Sept4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sept4_5end
Coexpression cluster:MCL_coexpression_mm9:1589
Association with transcript: 0bp_to_ENSMUST00000107962, ENSMUST00000122067, ENSMUST00000123081, ENSMUST00000132723, ENSMUST00000133638, ENSMUST00000140398, uc007kts.1, uc007ktt.1, uc007ktu.1_5end
EntrezGene:Sept4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sept4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I326.04
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G618.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.73
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B828.12
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E152.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C534.03
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E813.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F139.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3147.56
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3141.35
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7139.78
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.96
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4164.16
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E595.11
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6103.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G335.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F759.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.85
accessory axillary lymph node, adult.CNhs10475.1063-29H97.77
adrenal gland, adult.CNhs10508.49-24D722.12
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D610.66
adrenal gland, embryo E17.CNhs11043.1263-45I18.30
adrenal gland, embryo E18.CNhs11026.1262-18F510.40
adrenal gland, neonate N00.CNhs11191.1311-23C18.58
adrenal gland, neonate N25.CNhs11223.1377-27I318.72
amnion, adult pregnant day17.5.CNhs10488.583-22A835.10
aorta, adult.CNhs10498.46-23H110.56
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F513.10
bone (os femoris), neonate N16.CNhs11225.1525-43A613.91
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B297.50
cerebellum, neonate N30.CNhs11135.1395-42I2138.03
colon, adult.CNhs10468.36-18H711.75
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A4100.81
corpus striatum, adult.CNhs10487.19-21D873.66
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D553.02
cortex, neonate N30.CNhs11107.1392-42F254.47
diencephalon, adult.CNhs10482.20-12F2106.18
diencephalon, neonate N30.CNhs11201.1388-42B292.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.81
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G414.10
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C912.42
eyeball, embryo E17.CNhs11023.1261-18D415.22
eyeball, neonate N00.CNhs11207.633-15C618.91
eyeball, neonate N01.CNhs11140.1532-43E716.14
eyeball, neonate N02.CNhs11205.1551-44G819.12
eyeball, neonate N16.CNhs11188.777-19A242.17
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I95.22
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C812.00
heart, embryo E16.CNhs11021.457-17C69.41
heart, embryo E17.CNhs11025.479-18E516.97
heart, embryo E18.CNhs11030.1283-20G314.49
heart, neonate N00.CNhs11213.639-21E320.43
heart, neonate N03.CNhs11221.1349-25I215.80
heart, neonate N10.CNhs11118.749-24G141.37
heart, neonate N16.CNhs11209.782-15G139.40
heart, neonate N20.CNhs11127.821-26I642.25
heart, neonate N25.CNhs11196.1351-25D336.45
heart, neonate N30.CNhs11202.1390-42D247.37
hippocampus, adult.CNhs10478.13-16E851.73
hippocampus, neonate N00.CNhs11228.627-43G110.70
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D85.15
intestine, embryo E16.CNhs10585.463-22H411.90
intestine, embryo E17.CNhs10582.482-18D311.34
intestine, embryo E18.CNhs10526.1289-20F711.79
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E914.16
intestine, neonate N06.CNhs11102.688-20B816.59
intestine, neonate N07.CNhs11095.720-20F220.29
intestine, neonate N10.CNhs11098.755-23A519.69
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E314.05
intestine, neonate N30.CNhs11131.1384-42G113.94
kidney, embryo E14.CNhs10606.411-4I98.91
kidney, embryo E15.CNhs10997.434-16F810.28
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I215.68
kidney, embryo E18.CNhs11001.1288-20C725.60
kidney, neonate N00.CNhs11214.646-21G732.68
kidney, neonate N10.CNhs11206.758-6D534.78
kidney, neonate N20.CNhs11113.832-19I130.41
kidney, neonate N25.CNhs11122.1353-25F331.71
kidney, neonate N30.CNhs11203.1385-42H134.43
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A39.68
liver, embryo E18.CNhs10579.499-43G410.93
liver, neonate N00.CNhs11117.641-24F410.54
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H216.75
liver, neonate N10.CNhs11115.751-24B919.97
liver, neonate N20.CNhs11220.823-25A315.66
liver, neonate N25.CNhs11198.1368-26H113.45
liver, neonate N30.CNhs11106.1382-42D118.33
lung, adult.CNhs10474.28-22B190.53
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F89.29
lung, embryo E15.CNhs11020.432-17C513.41
lung, embryo E16.CNhs10998.458-17B624.64
lung, embryo E17.CNhs10605.480-44A653.60
lung, embryo E18.CNhs10583.1287-20I678.08
lung, neonate N00.CNhs11224.640-42C686.44
lung, neonate N06.CNhs11212.683-20E5107.82
lung, neonate N07.CNhs11111.715-19A3117.82
lung, neonate N10.CNhs11219.750-23E6154.35
lung, neonate N20.CNhs11109.822-18A4140.76
lung, neonate N25.CNhs11119.1359-25C7151.79
lung, neonate N30.CNhs11133.1394-42H2152.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B612.29
mammary gland, adult pregnant day19.CNhs10476.588-5H210.49
medulla oblongata, adult.CNhs10477.17-12C2141.93
medulla oblongata, neonate N30.CNhs11200.1396-42A3161.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I958.48
ovary, adult.CNhs10507.91-2I78.94
ovary, embryo E18.CNhs11040.505-44H78.90
ovary, neonate N00.CNhs11217.1299-22I49.28
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E57.17
pancreas, embryo E17.CNhs10599.1558-45G310.04
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G916.80
pancreas, neonate N01.CNhs11138.1531-43D711.63
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B69.48
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F59.21
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I713.38
placenta, adult pregnant day17.CNhs10464.577-18G3101.89
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G410.50
skin, neonate N03.CNhs11215.662-22H35.13
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I118.36
spinal cord, adult.CNhs10505.24-13C9144.26
spleen, adult.CNhs10465.25-2G29.74
spleen, embryo E16.CNhs11035.461-43C113.21
spleen, embryo E18.CNhs11011.1271-21F232.22
spleen, neonate N10.CNhs11116.752-24D115.07
spleen, neonate N20.CNhs11112.824-19H19.98
spleen, neonate N25.CNhs11099.1354-25G316.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A911.49
stomach, neonate N25.CNhs11104.1355-25E411.26
stomach, neonate N30.CNhs11134.1386-42I112.96
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F57.48
testis, embryo E15.CNhs11034.443-27C56.95
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I26.37
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C16.44
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C75.46
thymus, neonate N06.CNhs11197.681-26C44.04
thymus, neonate N07.CNhs11211.713-19D35.56
thymus, neonate N10.CNhs11194.748-24E45.44
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G75.20
thymus, neonate N30.CNhs11132.1393-42G28.18
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H330.63
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.03
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G528.04
urinary bladder, adult.CNhs10481.879-12E425.31
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A450.01
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A560.43
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A753.59
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A855.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A948.67
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B110.06
whole body, embryo E16.CNhs10514.453-14F215.63
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.84
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.36
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.71
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.51
whole body, embryo E17.5.CNhs10513.490-9F915.43
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B317.08
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C626.59
whole body, neonate N06.CNhs10515.692-21D120.74
whole body, neonate N10.CNhs10518.761-6B422.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube5.34e-12114
anatomical conduit1.10e-10122
structure with developmental contribution from neural crest4.07e-1092
regional part of nervous system1.10e-0854
neurectoderm4.65e-0864
neural plate4.65e-0864
presumptive neural plate4.65e-0864
neural tube1.04e-0752
neural rod1.04e-0752
future spinal cord1.04e-0752
neural keel1.04e-0752
brain5.87e-0747
future brain5.87e-0747
central nervous system7.99e-0773
ecto-epithelium9.77e-0773
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:87391886..87391972,%2B&oldid=4216734"