FFCP PHASE1:Mm9::chr19:56536119..56536136,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226245 | |EntrezGene=226245 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3210 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BW88 | |UniProt=Q8BW88 | ||
|association_with_transcript=0bp_to_ENSMUST00000039666,NM_001164263,NM_172641,uc008hyy.2,uc008hyz.2_5end | |association_with_transcript=0bp_to_ENSMUST00000039666,NM_001164263,NM_172641,uc008hyy.2,uc008hyz.2_5end | ||
|cluster_id=chr19:56536119..56536136,+ | |||
|description=CAGE_peak_1_at_9930023K05Rik_5end | |description=CAGE_peak_1_at_9930023K05Rik_5end | ||
|id=chr19:56536119..56536136,+ | |id=chr19:56536119..56536136,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.64e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.93e-10!59;UBERON:0003100!1.84e-08!11;UBERON:0000160!2.16e-08!43;UBERON:0004119!1.24e-07!130;UBERON:0000925!1.24e-07!130;UBERON:0006595!1.24e-07!130;UBERON:0000474!3.14e-07!9;UBERON:0001007!3.75e-07!128;UBERON:0001555!3.75e-07!128;UBERON:0007026!3.75e-07!128;UBERON:0004175!6.81e-07!9;UBERON:0001045!9.28e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,3.17e-14,11;UBERON:0000474,1.04e-11,9;UBERON:0004175,4.56e-11,9;UBERON:0001264,2.26e-10,12;UBERON:0003134,5.12e-10,8;UBERON:0002553,6.32e-10,39;UBERON:0007023,2.21e-09,51;UBERON:0003886,4.03e-09,38;UBERON:0005156,9.96e-09,26;UBERON:0000990,9.96e-09,26;UBERON:0004122,1.61e-08,5;UBERON:0002323,3.13e-08,37;UBERON:0004458,3.13e-08,37;UBERON:0000080,3.15e-07,4;UBERON:0005904,3.15e-07,4;UBERON:0006947,3.15e-07,4;UBERON:0002120,3.15e-07,4;UBERON:0004054,3.15e-07,4;UBERON:0004875,3.15e-07,4;UBERON:0004876,3.15e-07,4;UBERON:0005721,3.15e-07,4;UBERON:0005754,3.15e-07,4;UBERON:0007297,3.15e-07,4;UBERON:0002075,3.90e-07,19 | |||
|phase1_expression=0.160148847104794,33.850614541018,27.7549536027617,0.30246421130683,0.500895729946347,23.8388566114883,34.8082834487333,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,39.1981435843846,39.4583963435532,39.6220055239364,56.8605834929979,98.6858245701372,0.190023419456374,0,73.1710685162506,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,7.8263411949453,0,0,0,0,0,1.12355536105401,0,0,0,0.563373679106722,0,0,0,8.87613268145978,11.4011939463794,12.6381111253696,2.16949371466214,0.517875767294343,0,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,4.17541391786297,4.22983700074316,7.32895999457657,7.78634866779954,0.130120442962704,0,0,0.452114453507145,0.204109497453984,0.2562274405697,0.187403449119458,8.53721123438752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,1.98251269790279,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0.379335801906163,0,0,0.407302655690628,1.16371492300575,0.911765658574141,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.169745085775188,0,0,0,0,0.472905432318573,0,0.318909537314974,0,0,0,0,0,1.96705709207614,6.89841865761831,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,30.3751782345695,13.3549202750441,21.9897395127328,124.552442844264,1.32745138339963,0,1.209294227859,5.65815239267694,3.54362271456927,1.53717573971964,0.258428293168221,2.18120237686503,2.85197902707777,1.58018378967908,1.05418608574999,2.06271086496374,1.36175842301515,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,1.17335854031855,0.21183207086382,128.568056066043,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0,0.813277868507395,0.540026704109006,1.25452977608681,1.74690050996942,4.72025212346872,5.53778153359751,2.35580347785627,0.648074866458964,1.86401793926078,0,0.299033092087958,0.165458490457098,0,0,0,0,0.2604087696879,0,0.483168241652012,0,0.948033361884535,0,0,0,0.179026695667481,0.198681354781265,0.721172697119813,1.03382669022204,0.605798699688886,0.838274873204998,0.705783295957884,0.779663045918019,0.577271049841977,0.818138315270983,0.680191150845634,0,0,0,1.9318959403219,3.00291960721891,126.55777236868,12.4333659865858,67.712234044774,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0,0.468207537349412,0.320125762024346,0.402048282689293,0,0.347652977834566,0.192909220463705,0,0.588795680537589,0,0,0.238436189947321,0.436039249896986,0.282328141245992,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0.701794825336225,1.28922632428979,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,33.850614541018,27.7549536027617,0.30246421130683,0.500895729946347,23.8388566114883,34.8082834487333,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,39.1981435843846,39.4583963435532,39.6220055239364,56.8605834929979,98.6858245701372,0.190023419456374,0,73.1710685162506,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,7.8263411949453,0,0,0,0,0,1.12355536105401,0,0,0,0.563373679106722,0,0,0,8.87613268145978,11.4011939463794,12.6381111253696,2.16949371466214,0.517875767294343,0,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,4.17541391786297,4.22983700074316,7.32895999457657,7.78634866779954,0.130120442962704,0,0,0.452114453507145,0.204109497453984,0.2562274405697,0.187403449119458,8.53721123438752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,1.98251269790279,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0.379335801906163,0,0,0.407302655690628,1.16371492300575,0.911765658574141,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.169745085775188,0,0,0,0,0.472905432318573,0,0.318909537314974,0,0,0,0,0,1.96705709207614,6.89841865761831,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,30.3751782345695,13.3549202750441,21.9897395127328,124.552442844264,1.32745138339963,0,1.209294227859,5.65815239267694,3.54362271456927,1.53717573971964,0.258428293168221,2.18120237686503,2.85197902707777,1.58018378967908,1.05418608574999,2.06271086496374,1.36175842301515,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,1.17335854031855,0.21183207086382,128.568056066043,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0.954670618015114,0,0.813277868507395,0.540026704109006,1.25452977608681,1.74690050996942,4.72025212346872,5.53778153359751,2.35580347785627,0.648074866458964,1.86401793926078,0,0.299033092087958,0.165458490457098,0,0,0,0,0.2604087696879,0,0.483168241652012,0,0.948033361884535,0,0,0,0.179026695667481,0.198681354781265,0.721172697119813,1.03382669022204,0.605798699688886,0.838274873204998,0.705783295957884,0.779663045918019,0.577271049841977,0.818138315270983,0.680191150845634,0,0,0,1.9318959403219,3.00291960721891,126.55777236868,12.4333659865858,67.712234044774,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0,0.468207537349412,0.320125762024346,0.402048282689293,0,0.347652977834566,0.192909220463705,0,0.588795680537589,0,0,0.238436189947321,0.436039249896986,0.282328141245992,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0.701794825336225,1.28922632428979,0,0.220591419119515,0 | ||
|short_description=p1@9930023K05Rik | |short_description=p1@9930023K05Rik | ||
}} | }} |
Latest revision as of 00:12, 26 September 2015
Short description: | p1@9930023K05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_9930023K05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3210 |
Association with transcript: | 0bp_to_ENSMUST00000039666, NM_001164263, NM_172641, uc008hyy.2, uc008hyz.2_5end |
EntrezGene: | 9930023K05Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.64e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
female organism | 3.17e-14 | 11 |
female reproductive system | 1.04e-11 | 9 |
internal genitalia | 4.56e-11 | 9 |
pancreas | 2.26e-10 | 12 |
female reproductive organ | 5.12e-10 | 8 |
anatomical cavity | 6.32e-10 | 39 |
adult organism | 2.21e-09 | 51 |
body cavity precursor | 4.03e-09 | 38 |
reproductive structure | 9.96e-09 | 26 |
reproductive system | 9.96e-09 | 26 |
genitourinary system | 1.61e-08 | 5 |
body cavity | 3.13e-08 | 37 |
body cavity or lining | 3.13e-08 | 37 |
mesonephros | 3.15e-07 | 4 |
duct of male reproductive system | 3.15e-07 | 4 |
male genital duct | 3.15e-07 | 4 |
pronephros | 3.15e-07 | 4 |
internal male genitalia | 3.15e-07 | 4 |
nephrogenic cord | 3.15e-07 | 4 |
urogenital ridge | 3.15e-07 | 4 |
pronephric mesoderm | 3.15e-07 | 4 |
rostral part of nephrogenic cord | 3.15e-07 | 4 |
presumptive pronephric mesoderm | 3.15e-07 | 4 |
viscus | 3.90e-07 | 19 |