FFCP PHASE1:Mm9::chr3:95976430..95976453,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107701 | |EntrezGene=107701 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENSMUST00000153977_5end | |association_with_transcript=-16bp_to_ENSMUST00000153977_5end | ||
|cluster_id=chr3:95976430..95976453,+ | |||
|description=CAGE_peak_2_at_Sf3b4_5end | |description=CAGE_peak_2_at_Sf3b4_5end | ||
|id=chr3:95976430..95976453,+ | |id=chr3:95976430..95976453,+ | ||
|ontology_enrichment_celltype=CL:0000144!8.89e-13!121;CL:0000012!8.89e-13!121;CL:0000548!1.85e-12!115;CL:0000004!1.85e-12!115;CL:0000255!1.85e-12!115;CL:0000034!1.97e-12!97;CL:0000055!3.29e-12!50;CL:0000221!3.30e-12!44;CL:0000133!3.30e-12!44;CL:0002371!3.54e-12!118;CL:0002319!3.95e-12!43;CL:0000723!2.14e-10!91;CL:0000048!2.14e-10!91;CL:0000117!3.48e-09!23;CL:0000337!3.48e-09!23;CL:0000540!7.12e-08!33;CL:0000047!7.12e-08!33;CL:0000031!7.12e-08!33;CL:0000404!7.12e-08!33;CL:0000393!1.31e-07!39;CL:0000211!1.31e-07!39;CL:0002321!9.29e-07!70;CL:0000220!9.29e-07!70 | |ontology_enrichment_celltype=CL:0000144!8.89e-13!121;CL:0000012!8.89e-13!121;CL:0000548!1.85e-12!115;CL:0000004!1.85e-12!115;CL:0000255!1.85e-12!115;CL:0000034!1.97e-12!97;CL:0000055!3.29e-12!50;CL:0000221!3.30e-12!44;CL:0000133!3.30e-12!44;CL:0002371!3.54e-12!118;CL:0002319!3.95e-12!43;CL:0000723!2.14e-10!91;CL:0000048!2.14e-10!91;CL:0000117!3.48e-09!23;CL:0000337!3.48e-09!23;CL:0000540!7.12e-08!33;CL:0000047!7.12e-08!33;CL:0000031!7.12e-08!33;CL:0000404!7.12e-08!33;CL:0000393!1.31e-07!39;CL:0000211!1.31e-07!39;CL:0002321!9.29e-07!70;CL:0000220!9.29e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.96e-12,97;CL:0000221,3.30e-12,44;CL:0000133,3.30e-12,44;CL:0002319,3.95e-12,43;CL:0000723,2.14e-10,91;CL:0000048,2.14e-10,91;CL:0000117,3.48e-09,23;CL:0000337,3.48e-09,23;CL:0000540,7.12e-08,33;CL:0000047,7.12e-08,33;CL:0000031,7.12e-08,33;CL:0000404,7.12e-08,33;CL:0000393,1.31e-07,39;CL:0000211,1.31e-07,39;CL:0002321,9.27e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.99e-10!75;UBERON:0001016!5.99e-10!75;UBERON:0001017!5.26e-09!73;UBERON:0005743!5.26e-09!73;UBERON:0004121!2.04e-07!102;UBERON:0000924!2.04e-07!102;UBERON:0006601!2.04e-07!102 | |ontology_enrichment_uberon=UBERON:0000073!5.99e-10!75;UBERON:0001016!5.99e-10!75;UBERON:0001017!5.26e-09!73;UBERON:0005743!5.26e-09!73;UBERON:0004121!2.04e-07!102;UBERON:0000924!2.04e-07!102;UBERON:0006601!2.04e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.99e-10,75;UBERON:0001017,5.26e-09,73;UBERON:0004121,1.03e-07,95;UBERON:0000924,1.03e-07,95;UBERON:0006601,1.03e-07,95 | |||
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| ||
|short_description=p2@Sf3b4 | |short_description=p2@Sf3b4 | ||
}} | }} |
Latest revision as of 00:14, 26 September 2015
Short description: | p2@Sf3b4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sf3b4_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -16bp_to_ENSMUST00000153977_5end |
EntrezGene: | Sf3b4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.96e-12 | 97 |
ectodermal cell | 3.30e-12 | 44 |
neurectodermal cell | 3.30e-12 | 44 |
neural cell | 3.95e-12 | 43 |
somatic stem cell | 2.14e-10 | 91 |
multi fate stem cell | 2.14e-10 | 91 |
CNS neuron (sensu Vertebrata) | 3.48e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.48e-09 | 23 |
neuron | 7.12e-08 | 33 |
neuronal stem cell | 7.12e-08 | 33 |
neuroblast | 7.12e-08 | 33 |
electrically signaling cell | 7.12e-08 | 33 |
electrically responsive cell | 1.31e-07 | 39 |
electrically active cell | 1.31e-07 | 39 |
embryonic cell | 9.27e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.99e-10 | 75 |
central nervous system | 5.26e-09 | 73 |
ectoderm-derived structure | 1.03e-07 | 95 |
ectoderm | 1.03e-07 | 95 |
presumptive ectoderm | 1.03e-07 | 95 |