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FFCP PHASE1:Mm9::chr11:94937957..94937969,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16400
|EntrezGene=16400
|HGNC=
|HGNC=
|MCL_coexpression_id=2741
|MCL_coexpression_id=2741
|TSSclassifier=NA
|UniProt=Q62470
|UniProt=Q62470
|association_with_transcript=58bp_to_ENSMUST00000001548,ENSMUST00000073698,NM_013565,uc007kzw.1_5end
|association_with_transcript=58bp_to_ENSMUST00000001548,ENSMUST00000073698,NM_013565,uc007kzw.1_5end
|cluster_id=chr11:94937957..94937969,-
|description=CAGE_peak_4_at_Itga3_5end
|description=CAGE_peak_4_at_Itga3_5end
|id=chr11:94937957..94937969,-
|id=chr11:94937957..94937969,-
|ontology_enrichment_celltype=CL:0002076!1.81e-07!15
|ontology_enrichment_celltype=CL:0002076!1.81e-07!15
|ontology_enrichment_celltype_v019_2=CL:0002076,2.09e-11,15;CL:0000066,7.44e-11,25;CL:0000223,4.18e-09,20;CL:0000239,6.23e-09,6;CL:0000677,6.23e-09,6;CL:0000584,6.23e-09,6;CL:0000075,1.79e-07,7;CL:0002563,6.10e-07,9;CL:0002251,6.10e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!4.93e-11!43;UBERON:0005409!5.35e-11!59;UBERON:0000344!2.87e-09!15;UBERON:0005178!1.51e-08!17;UBERON:0005181!1.51e-08!17;UBERON:0002224!1.51e-08!17;UBERON:0000915!1.51e-08!17;UBERON:0008947!1.51e-08!17;UBERON:0003258!1.51e-08!17;UBERON:0001242!5.41e-08!13;UBERON:0000060!5.41e-08!13;UBERON:0001262!5.41e-08!13;UBERON:0004786!5.41e-08!13;UBERON:0004923!5.86e-08!24;UBERON:0004119!1.58e-07!130;UBERON:0000925!1.58e-07!130;UBERON:0006595!1.58e-07!130;UBERON:0001007!5.92e-07!128;UBERON:0001555!5.92e-07!128;UBERON:0007026!5.92e-07!128
|ontology_enrichment_uberon=UBERON:0000160!4.93e-11!43;UBERON:0005409!5.35e-11!59;UBERON:0000344!2.87e-09!15;UBERON:0005178!1.51e-08!17;UBERON:0005181!1.51e-08!17;UBERON:0002224!1.51e-08!17;UBERON:0000915!1.51e-08!17;UBERON:0008947!1.51e-08!17;UBERON:0003258!1.51e-08!17;UBERON:0001242!5.41e-08!13;UBERON:0000060!5.41e-08!13;UBERON:0001262!5.41e-08!13;UBERON:0004786!5.41e-08!13;UBERON:0004923!5.86e-08!24;UBERON:0004119!1.58e-07!130;UBERON:0000925!1.58e-07!130;UBERON:0006595!1.58e-07!130;UBERON:0001007!5.92e-07!128;UBERON:0001555!5.92e-07!128;UBERON:0007026!5.92e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.41e-24,31;UBERON:0004119,1.06e-17,118;UBERON:0000925,1.06e-17,118;UBERON:0006595,1.06e-17,118;UBERON:0005409,1.33e-17,47;UBERON:0001007,2.12e-16,116;UBERON:0001555,2.12e-16,116;UBERON:0007026,2.12e-16,116;UBERON:0004921,9.39e-15,114;UBERON:0000344,1.07e-13,15;UBERON:0004923,2.05e-12,24;UBERON:0001242,2.66e-11,13;UBERON:0001262,2.66e-11,13;UBERON:0004786,2.66e-11,13;UBERON:0005178,2.41e-10,17;UBERON:0005181,2.41e-10,17;UBERON:0002224,2.41e-10,17;UBERON:0000915,2.41e-10,17;UBERON:0008947,2.41e-10,17;UBERON:0003258,2.41e-10,17;UBERON:0002048,5.11e-07,14;UBERON:0000117,5.11e-07,14;UBERON:0000171,5.11e-07,14;UBERON:0000170,5.11e-07,14;UBERON:0005597,5.11e-07,14;UBERON:0000118,5.11e-07,14;UBERON:0003350,6.10e-07,9;UBERON:0004808,6.10e-07,9;UBERON:0001277,6.10e-07,9
|phase1_expression=0,15.0059425284925,19.1099680543605,12.40103266358,13.023288978605,5.03637815735669,3.03696432774183,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,7.03966660290989,6.65286915094793,5.16808767703518,9.04600191934057,8.61884930743556,3.99049180858385,5.54466285471848,5.76499327703792,0,0,0,0.866554859253824,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,10.0291571935005,45.9144121915046,38.6915499157824,5.03951117851305,18.6878333674463,0,0,0,0.257259436035947,0,4.12537673821954,0,0,0,3.04960078862219,1.77858959222228,0,0,0,0.299600110518405,0.768436610643109,0,0.135005938331691,0.210324961351382,0.856952953211411,0.441737081903227,0,0,0,1.10115880999389,0.510749352340751,0.307213066512487,0.131886287730194,0.274462930807229,0,0.558365998002762,0.56276261003168,0,0,0.569486723196412,0,0,0.302286240427142,3.18850937571846,0,0,0,0,0.448026887097336,1.12355536105401,0,0.519572009205738,0.70667914902068,0.281686839553361,3.84979432242953,2.54805239706646,0,11.4740251735943,12.4146334082798,10.1104889002957,1.1418387971906,0,0.29688427812965,0.346970653532272,0.304465478312141,0.461230994512117,0,0.23517741427141,0.376999773989026,5.6854842578906,0.86759614151947,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,1.78819938646014,0,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0.162241263067758,1.32391173005411,0.124406970610093,0.252722758433675,0.420883711772948,0.390361328888111,0.229902104433473,0,0,0.408218994907967,0,0.374806898238915,0,0.215567992932842,0,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0,0,0.930135779001631,0,0.116765342367169,0,0,0.405344047729279,0.146199987425332,0.439100230582101,0.268412837520744,0,0.102904612379284,5.28670052774077,1.58670339998127,1.06644125267617,0.464473343720877,1.67527699718721,3.63030344322017,3.33567065767305,3.23383564391351,5.69434873853414,4.28217282282428,2.26201687920243,3.18330355265841,3.70431765526328,1.79763881730844,3.8904848977445,1.39398891278057,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.911765658574141,1.07502113111237,1.18088118383682,0.470996183524124,0.493588655687202,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,3.32555742299888,0.568474235311454,0.488894929326078,0.848725428875941,0.704070744865506,2.1775813467436,2.61848004974615,4.09780660501378,1.26108115284953,2.6575762757853,2.71073106717728,3.27726629431476,3.62638461918381,5.93061140184197,0,0,0,0.827810238914197,0.321101179975584,0.35163505977661,0.163934945376675,0.252470927204373,0.94652465824877,0.780877488593277,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0.425820255624806,0.890328018336276,0.977321756121456,0.659880491890142,0,0,0.604647113929502,0,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,0.356497378384721,0.316036757935816,0,2.06271086496374,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,1.64270195644597,1.69465656691056,1.32317038832977,1.31909002353184,0.807322133479528,0.603129249281559,0.954978752025092,0.328281799490123,2.91480836629851,0.18542530201051,0,1.23832120777933,0.370389054739423,0.188368457004691,0,0.228778173206523,0.339956859987711,0.279902904647316,0.552799895217695,0,0.790839983952838,0.406638934253697,1.08005340821801,0.627264888043406,0.87345025498471,0.404593039154462,0.661227645802687,2.09404753587224,1.55537967950151,0,0,0.747582730219894,0.496375471371293,0.388902376688095,0.516639293910924,0,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.226730383615211,0.665957860122194,0.62799699626633,0.839423081820392,1.15913756419314,0.563047426353546,0.36630324853453,1.07184189539533,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.377252682772152,0.468207537349412,0.384150914429216,0.402048282689293,0.476293691283074,0.579421629724277,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.953744759789284,0,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.711810108745045,0.886540341380071,0.409231043169689,0.154936841185966,0,0,0.935726433781634,0.429742108096597,0.191288332068843,0.220591419119515,0
|phase1_expression=0,15.0059425284925,19.1099680543605,12.40103266358,13.023288978605,5.03637815735669,3.03696432774183,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,7.03966660290989,6.65286915094793,5.16808767703518,9.04600191934057,8.61884930743556,3.99049180858385,5.54466285471848,5.76499327703792,0,0,0,0.866554859253824,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,10.0291571935005,45.9144121915046,38.6915499157824,5.03951117851305,18.6878333674463,0,0,0,0.257259436035947,0,4.12537673821954,0,0,0,3.04960078862219,1.77858959222228,0,0,0,0.299600110518405,0.768436610643109,0,0.135005938331691,0.210324961351382,0.856952953211411,0.441737081903227,0,0,0,1.10115880999389,0.510749352340751,0.307213066512487,0.131886287730194,0.274462930807229,0,0.558365998002762,0.56276261003168,0,0,0.569486723196412,0,0,0.302286240427142,3.18850937571846,0,0,0,0,0.448026887097336,1.12355536105401,0,0.519572009205738,0.70667914902068,0.281686839553361,3.84979432242953,2.54805239706646,0,11.4740251735943,12.4146334082798,10.1104889002957,1.1418387971906,0,0.29688427812965,0.346970653532272,0.304465478312141,0.461230994512117,0,0.23517741427141,0.376999773989026,5.6854842578906,0.86759614151947,0,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,1.78819938646014,0,0,0,0,0,0.125654352112864,0,0,0.41557608911912,0.162241263067758,1.32391173005411,0.124406970610093,0.252722758433675,0.420883711772948,0.390361328888111,0.229902104433473,0,0,0.408218994907967,0,0.374806898238915,0,0.215567992932842,0,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.59710280045548,0,0,0,0.414251545071004,0,0.36012412292203,0.23674473558521,0,0,0.930135779001631,0,0.116765342367169,0,0,0.405344047729279,0.146199987425332,0.439100230582101,0.268412837520744,0,0.102904612379284,5.28670052774077,1.58670339998127,1.06644125267617,0.464473343720877,1.67527699718721,3.63030344322017,3.33567065767305,3.23383564391351,5.69434873853414,4.28217282282428,2.26201687920243,3.18330355265841,3.70431765526328,1.79763881730844,3.8904848977445,1.39398891278057,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.911765658574141,1.07502113111237,1.18088118383682,0.470996183524124,0.493588655687202,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0.179397413521912,0,3.32555742299888,0.568474235311454,0.488894929326078,0.848725428875941,0.704070744865506,2.1775813467436,2.61848004974615,4.09780660501378,1.26108115284953,2.6575762757853,2.71073106717728,3.27726629431476,3.62638461918381,5.93061140184197,0,0,0,0.827810238914197,0.321101179975584,0.35163505977661,0.163934945376675,0.252470927204373,0.94652465824877,0.780877488593277,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0.425820255624806,0.890328018336276,0.977321756121456,0.659880491890142,0,0,0.604647113929502,0,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,0.356497378384721,0.316036757935816,0,2.06271086496374,0,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,1.64270195644597,1.69465656691056,1.32317038832977,1.31909002353184,0.807322133479528,0.603129249281559,0.954978752025092,0.328281799490123,2.91480836629851,0.18542530201051,0,1.23832120777933,0.370389054739423,0.188368457004691,0,0.228778173206523,0.339956859987711,0.279902904647316,0.552799895217695,0,0.790839983952838,0.406638934253697,1.08005340821801,0.627264888043406,0.87345025498471,0.404593039154462,0.661227645802687,2.09404753587224,1.55537967950151,0,0,0.747582730219894,0.496375471371293,0.388902376688095,0.516639293910924,0,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.226730383615211,0.665957860122194,0.62799699626633,0.839423081820392,1.15913756419314,0.563047426353546,0.36630324853453,1.07184189539533,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.377252682772152,0.468207537349412,0.384150914429216,0.402048282689293,0.476293691283074,0.579421629724277,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.953744759789284,0,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.711810108745045,0.886540341380071,0.409231043169689,0.154936841185966,0,0,0.935726433781634,0.429742108096597,0.191288332068843,0.220591419119515,0
|short_description=p4@Itga3
|short_description=p4@Itga3
}}
}}

Latest revision as of 00:38, 26 September 2015

Short description:p4@Itga3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Itga3_5end
Coexpression cluster:MCL_coexpression_mm9:2741
Association with transcript: 58bp_to_ENSMUST00000001548, ENSMUST00000073698, NM_013565, uc007kzw.1_5end
EntrezGene:Itga3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Itga3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.40
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I28.62
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B845.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C338.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H25.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine7.41e-2431
endoderm-derived structure1.06e-17118
endoderm1.06e-17118
presumptive endoderm1.06e-17118
gastrointestinal system1.33e-1747
digestive system2.12e-16116
digestive tract2.12e-16116
primitive gut2.12e-16116
subdivision of digestive tract9.39e-15114
mucosa1.07e-1315
organ component layer2.05e-1224
intestinal mucosa2.66e-1113
wall of intestine2.66e-1113
gastrointestinal system mucosa2.66e-1113
thoracic cavity element2.41e-1017
thoracic segment organ2.41e-1017
thoracic cavity2.41e-1017
thoracic segment of trunk2.41e-1017
respiratory primordium2.41e-1017
endoderm of foregut2.41e-1017
lung5.11e-0714
respiratory tube5.11e-0714
respiration organ5.11e-0714
pair of lungs5.11e-0714
lung primordium5.11e-0714
lung bud5.11e-0714
epithelium of mucosa6.10e-079
gastrointestinal system epithelium6.10e-079
intestinal epithelium6.10e-079
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