FFCP PHASE1:Mm9::chr3:96633416..96633424,+: Difference between revisions
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{{FFCP|EntrezGene=59020|HGNC=|MCL_coexpression_id=9|UniProt=D3YZS9|association_with_transcript=30bp_to_ENSMUST00000138014_5end|description=CAGE_peak_8_at_Pdzk1_5end|id=chr3:96633416..96633424,+|ontology_enrichment_celltype=CL:0000239!2.59e-09!6;CL:0000677!2.59e-09!6;CL:0000212!2.59e-09!6;CL:0000584!2.59e-09!6;CL:0000075!6.41e-08!7;CL:0000473!8.39e-08!3;CL:0000627!8.39e-08!3;CL:0000682!8.39e-08!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.57e-13!15;UBERON:0004923!3.45e-11!24;UBERON:0001242!3.48e-10!13;UBERON:0000060!3.48e-10!13;UBERON:0001262!3.48e-10!13;UBERON:0004786!3.48e-10!13;UBERON:0002113!1.96e-08!14;UBERON:0003918!1.96e-08!14;UBERON:0005095!1.96e-08!14;UBERON:0007687!1.96e-08!14;UBERON:0000331!7.57e-08!3;UBERON:0002116!7.57e-08!3;UBERON:0001204!7.57e-08!3;UBERON:0001168!7.57e-08!3;UBERON:0001301!1.54e-07!3;UBERON:0006555!1.54e-07!3;UBERON:0005103!1.54e-07!3;UBERON:0000083!1.54e-07!3;UBERON:0009201!1.54e-07!3;UBERON:0004819!1.54e-07!3;UBERON:0006553!1.54e-07!3;UBERON:0003074!1.54e-07!3;UBERON:0003060!1.54e-07!3;UBERON:0004871!2.66e-07!3;UBERON:0006554!3.28e-07!16;UBERON:0000160!3.55e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.01e-20,3;UBERON:0006555,1.01e-20,3;UBERON:0005103,1.01e-20,3;UBERON:0000083,1.01e-20,3;UBERON:0009201,1.01e-20,3;UBERON:0004819,1.01e-20,3;UBERON:0006553,1.01e-20,3;UBERON:0003074,1.01e-20,3;UBERON:0003060,1.01e-20,3;UBERON:0000080,8.06e-16,4;UBERON:0005904,8.06e-16,4;UBERON:0006947,8.06e-16,4;UBERON:0002120,8.06e-16,4;UBERON:0004054,8.06e-16,4;UBERON:0004875,8.06e-16,4;UBERON:0004876,8.06e-16,4;UBERON:0005721,8.06e-16,4;UBERON:0005754,8.06e-16,4;UBERON:0007297,8.06e-16,4;UBERON:0000058,1.78e-09,7;UBERON:0001343,1.09e-08,2;UBERON:0004910,1.09e-08,2;UBERON:0004909,1.09e-08,2;UBERON:0005154,1.09e-08,2;UBERON:0005295,1.09e-08,2;UBERON:0005297,1.09e-08,2;UBERON:0005294,1.09e-08,2;UBERON:0010141,1.09e-08,2;UBERON:0005891,1.09e-08,2;UBERON:0004175,1.40e-07,9;UBERON:0003887,6.53e-07,10|phase1_expression=0,0.697950815278722,0.454999239389536,1.51232105653415,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.45881856213434,1.14846392823004,0.430761996159075,0.646413698057667,0.760093677825496,1.00812051903972,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,3.23458123586242,16.4269792981889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0,0,0.796565093017469,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@Pdzk1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=59020 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=D3YZS9 | |||
|association_with_transcript=30bp_to_ENSMUST00000138014_5end | |||
|cluster_id=chr3:96633416..96633424,+ | |||
|description=CAGE_peak_8_at_Pdzk1_5end | |||
|id=chr3:96633416..96633424,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.59e-09!6;CL:0000677!2.59e-09!6;CL:0000212!2.59e-09!6;CL:0000584!2.59e-09!6;CL:0000075!6.41e-08!7;CL:0000473!8.39e-08!3;CL:0000627!8.39e-08!3;CL:0000682!8.39e-08!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.57e-13!15;UBERON:0004923!3.45e-11!24;UBERON:0001242!3.48e-10!13;UBERON:0000060!3.48e-10!13;UBERON:0001262!3.48e-10!13;UBERON:0004786!3.48e-10!13;UBERON:0002113!1.96e-08!14;UBERON:0003918!1.96e-08!14;UBERON:0005095!1.96e-08!14;UBERON:0007687!1.96e-08!14;UBERON:0000331!7.57e-08!3;UBERON:0002116!7.57e-08!3;UBERON:0001204!7.57e-08!3;UBERON:0001168!7.57e-08!3;UBERON:0001301!1.54e-07!3;UBERON:0006555!1.54e-07!3;UBERON:0005103!1.54e-07!3;UBERON:0000083!1.54e-07!3;UBERON:0009201!1.54e-07!3;UBERON:0004819!1.54e-07!3;UBERON:0006553!1.54e-07!3;UBERON:0003074!1.54e-07!3;UBERON:0003060!1.54e-07!3;UBERON:0004871!2.66e-07!3;UBERON:0006554!3.28e-07!16;UBERON:0000160!3.55e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.01e-20,3;UBERON:0006555,1.01e-20,3;UBERON:0005103,1.01e-20,3;UBERON:0000083,1.01e-20,3;UBERON:0009201,1.01e-20,3;UBERON:0004819,1.01e-20,3;UBERON:0006553,1.01e-20,3;UBERON:0003074,1.01e-20,3;UBERON:0003060,1.01e-20,3;UBERON:0000080,8.06e-16,4;UBERON:0005904,8.06e-16,4;UBERON:0006947,8.06e-16,4;UBERON:0002120,8.06e-16,4;UBERON:0004054,8.06e-16,4;UBERON:0004875,8.06e-16,4;UBERON:0004876,8.06e-16,4;UBERON:0005721,8.06e-16,4;UBERON:0005754,8.06e-16,4;UBERON:0007297,8.06e-16,4;UBERON:0000058,1.78e-09,7;UBERON:0001343,1.09e-08,2;UBERON:0004910,1.09e-08,2;UBERON:0004909,1.09e-08,2;UBERON:0005154,1.09e-08,2;UBERON:0005295,1.09e-08,2;UBERON:0005297,1.09e-08,2;UBERON:0005294,1.09e-08,2;UBERON:0010141,1.09e-08,2;UBERON:0005891,1.09e-08,2;UBERON:0004175,1.40e-07,9;UBERON:0003887,6.53e-07,10 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,1.51232105653415,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.45881856213434,1.14846392823004,0.430761996159075,0.646413698057667,0.760093677825496,1.00812051903972,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,3.23458123586242,16.4269792981889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,0,0,0.796565093017469,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.0632365371242573,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@Pdzk1 | |||
}} |
Latest revision as of 00:47, 26 September 2015
Short description: | p8@Pdzk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Pdzk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 30bp_to_ENSMUST00000138014_5end |
EntrezGene: | Pdzk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.01e-20 | 3 |
excretory tube | 1.01e-20 | 3 |
mesonephric epithelium | 1.01e-20 | 3 |
mesonephric tubule | 1.01e-20 | 3 |
nephric duct | 1.01e-20 | 3 |
kidney epithelium | 1.01e-20 | 3 |
renal duct | 1.01e-20 | 3 |
mesonephric duct | 1.01e-20 | 3 |
pronephric duct | 1.01e-20 | 3 |
mesonephros | 8.06e-16 | 4 |
duct of male reproductive system | 8.06e-16 | 4 |
male genital duct | 8.06e-16 | 4 |
pronephros | 8.06e-16 | 4 |
internal male genitalia | 8.06e-16 | 4 |
nephrogenic cord | 8.06e-16 | 4 |
urogenital ridge | 8.06e-16 | 4 |
pronephric mesoderm | 8.06e-16 | 4 |
rostral part of nephrogenic cord | 8.06e-16 | 4 |
presumptive pronephric mesoderm | 8.06e-16 | 4 |
duct | 1.78e-09 | 7 |
seminiferous tubule of testis | 1.09e-08 | 2 |
epithelium of male gonad | 1.09e-08 | 2 |
epithelium of gonad | 1.09e-08 | 2 |
epithelial cord | 1.09e-08 | 2 |
sex cord | 1.09e-08 | 2 |
testis sex cord | 1.09e-08 | 2 |
genital ridge | 1.09e-08 | 2 |
primitive sex cord of indifferent gonad | 1.09e-08 | 2 |
coelomic epithelium | 1.09e-08 | 2 |
internal genitalia | 1.40e-07 | 9 |
intraembryonic coelom | 6.53e-07 | 10 |