FFCP PHASE1:Mm9::chr8:97501230..97501237,+: Difference between revisions
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{{FFCP|EntrezGene=14766|HGNC=|MCL_coexpression_id=1484|UniProt=Q8K209|association_with_transcript=221bp_to_NM_001198894,uc009mxl.2,uc009mxm.2_5end|description=CAGE_peak_8_at_Gpr56_5end|id=chr8:97501230..97501237,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!2.77e-15!128;UBERON:0001555!2.77e-15!128;UBERON:0007026!2.77e-15!128;UBERON:0004921!3.09e-15!126;UBERON:0004185!3.09e-15!126;UBERON:0004119!9.85e-15!130;UBERON:0000925!9.85e-15!130;UBERON:0006595!9.85e-15!130;UBERON:0005409!1.26e-12!59;UBERON:0000160!3.18e-11!43;UBERON:0001008!9.90e-09!17;UBERON:0000077!1.96e-08!97;UBERON:0006554!4.06e-08!16;UBERON:0001041!9.58e-08!92;UBERON:0000464!1.26e-07!57;UBERON:0002108!1.52e-07!16;UBERON:0003104!1.64e-07!131;UBERON:0009142!1.64e-07!131;UBERON:0001045!1.72e-07!13;UBERON:0002113!3.78e-07!14;UBERON:0003918!3.78e-07!14;UBERON:0005095!3.78e-07!14;UBERON:0007687!3.78e-07!14;UBERON:0001264!6.26e-07!12;UBERON:0003922!6.26e-07!12;UBERON:0002114!6.26e-07!12;UBERON:0003923!6.26e-07!12;UBERON:0003924!6.26e-07!12;UBERON:0003921!6.26e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.55e-11,114;UBERON:0001007,1.22e-10,116;UBERON:0001555,1.22e-10,116;UBERON:0007026,1.22e-10,116;UBERON:0004119,3.99e-10,118;UBERON:0000925,3.99e-10,118;UBERON:0006595,3.99e-10,118;UBERON:0005177,1.31e-08,79;UBERON:0001264,1.33e-08,12;UBERON:0001008,2.09e-08,19;UBERON:0002113,4.88e-08,14;UBERON:0003918,4.88e-08,14;UBERON:0011143,4.88e-08,14;UBERON:0005095,4.88e-08,14;UBERON:0007687,4.88e-08,14;UBERON:0006554,1.13e-07,18;UBERON:0005153,2.58e-07,17;UBERON:0002100,3.63e-07,90;UBERON:0005409,5.98e-07,47;UBERON:0005178,8.09e-07,17;UBERON:0005181,8.09e-07,17;UBERON:0002224,8.09e-07,17;UBERON:0000915,8.09e-07,17;UBERON:0008947,8.09e-07,17;UBERON:0003258,8.09e-07,17|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,1.84667199103079,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,3.06155844543851,0.595745707205312,1.30599894569468,0.95995453676044,0.22940928106717,0.57423196411502,0,0.430942465371778,2.09025761402011,1.00812051903972,1.10865255327652,0,0,0,2.88851619751275,1.49611180822643,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0,5.79728977403356,0,0,0,0,0,1.96622188184453,0,0,0,0.281686839553361,0,0,0,2.38140145112336,4.30711771307668,4.54972000513305,2.51204535381932,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0.741584903203122,0,0.884610551949874,0,0,0,5.59175283654366,0,0,2.04365644166873,3.71426885968353,0.599902730993408,2.41433431438823,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,1.01839363850316,4.22983700074316,16.1742565397552,15.993581047372,0.130120442962704,0,0.360124259610698,0,0.136072998302656,0.12811372028485,0.281105173679186,4.65666067330228,0.215567992932842,0.189106080167819,0.351902248327898,1.31517439456545,1.66828349535359,2.43776516565517,1.4404749548556,0.995171334092466,0.702213187313235,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0,1.32167513193519,1.58670339998127,0.213288250535234,0.696710015581316,1.15980715189884,1.21010114774006,2.2237804384487,2.47293313946327,2.84717436926707,3.45867804920423,5.27803938480566,6.56556357735798,6.82374304916921,1.79763881730844,2.80979464837102,2.78797782556114,0.948339504765408,1.71372768914593,1.1270773567308,3.86937522906097,6.98228953803453,6.59276706968994,17.2635746349222,16.0895061297766,13.9728867778824,9.87177311374404,0,0.166845105716094,0.196558995113203,0,0,0.72353147925725,0,0.863088412352432,1.62135226775035,1.09824565275233,0,1.86070473834252,1.5601883655728,0.757736633841335,0.538192240565737,0.482443521363367,5.35784251483154,0.189491411770485,0.488894929326078,2.37643120085263,1.64283173801951,1.67506257441816,2.61848004974615,3.31727201358258,3.4679731703362,3.76489972402917,2.39182152986231,3.4411296090305,3.28101465545202,3.90552458170081,0,0,10.8188140064188,14.9005843004556,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.712262414669021,0.488660878060728,4.12425307431339,5.30980553359851,1.94224508923985,4.53485335447127,4.14931175462976,4.72483028609236,4.30409207121498,2.84271122485043,3.99887102425256,2.85197902707777,6.63677191665214,6.32511651449993,5.15677716240934,0.340439605753788,0,0.258717367565509,0.643011105094777,0.532020700926821,0.178368817602071,0.329098041204242,0.913394847343798,0,0.21183207086382,3.52845436887939,8.57408515295696,4.35953952078945,6.09160541774374,11.4597450243011,12.9671310798598,3.78925087618806,0.18542530201051,0.170870880797853,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0,9.5187920796559,10.636310376598,11.8851977471804,9.54670618015114,0.158167996790568,1.82987520414164,2.80813886136683,3.3454127362315,5.02233896616208,4.98998081623837,4.3806331534428,5.23511883968059,0.648074866458964,24.2322332103901,0,0,0.165458490457098,0,0,0,0.234714477291508,0.39061315453185,0,0.241584120826006,0.576060012515731,0.948033361884535,2.02725215290164,2.36235201479103,1.81889152168913,1.61124026100733,1.39076948346885,1.20195449519969,1.03382669022204,2.22126189885925,2.057583779685,1.41156659191577,1.55932609183604,1.25075394132428,2.57129184799452,3.40095575422817,0,0,0,5.79568782096571,4.129014459926,4.02933573387983,6.85978813053011,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0.209613162627982,0.183843508450014,1.33348036680969,1.03017528619447,0.962757628775446,0.252697211763798,1.2673964994512,0.754505365544305,0.655490552289177,0.512201219238954,1.03383844120104,1.42888107384922,0.463537303779422,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,0.532427418478012,0.953744759789284,0.581385666529314,0.470546902076653,1.26921911837515,0.365855945745545,1.8414879800649,0.950628796921032,0.561142271657738,0.711810108745045,0.788035859004508,0.409231043169689,0.464810523557898,2.3148793317737,0.249810577937946,1.87145286756327,3.22306581072447,0.57386499620653,1.76473135295612,0.695603506861264|short_description=p8@Gpr56}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14766 | |||
|HGNC= | |||
|MCL_coexpression_id=1484 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K209 | |||
|association_with_transcript=221bp_to_NM_001198894,uc009mxl.2,uc009mxm.2_5end | |||
|cluster_id=chr8:97501230..97501237,+ | |||
|description=CAGE_peak_8_at_Gpr56_5end | |||
|id=chr8:97501230..97501237,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!2.77e-15!128;UBERON:0001555!2.77e-15!128;UBERON:0007026!2.77e-15!128;UBERON:0004921!3.09e-15!126;UBERON:0004185!3.09e-15!126;UBERON:0004119!9.85e-15!130;UBERON:0000925!9.85e-15!130;UBERON:0006595!9.85e-15!130;UBERON:0005409!1.26e-12!59;UBERON:0000160!3.18e-11!43;UBERON:0001008!9.90e-09!17;UBERON:0000077!1.96e-08!97;UBERON:0006554!4.06e-08!16;UBERON:0001041!9.58e-08!92;UBERON:0000464!1.26e-07!57;UBERON:0002108!1.52e-07!16;UBERON:0003104!1.64e-07!131;UBERON:0009142!1.64e-07!131;UBERON:0001045!1.72e-07!13;UBERON:0002113!3.78e-07!14;UBERON:0003918!3.78e-07!14;UBERON:0005095!3.78e-07!14;UBERON:0007687!3.78e-07!14;UBERON:0001264!6.26e-07!12;UBERON:0003922!6.26e-07!12;UBERON:0002114!6.26e-07!12;UBERON:0003923!6.26e-07!12;UBERON:0003924!6.26e-07!12;UBERON:0003921!6.26e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.55e-11,114;UBERON:0001007,1.22e-10,116;UBERON:0001555,1.22e-10,116;UBERON:0007026,1.22e-10,116;UBERON:0004119,3.99e-10,118;UBERON:0000925,3.99e-10,118;UBERON:0006595,3.99e-10,118;UBERON:0005177,1.31e-08,79;UBERON:0001264,1.33e-08,12;UBERON:0001008,2.09e-08,19;UBERON:0002113,4.88e-08,14;UBERON:0003918,4.88e-08,14;UBERON:0011143,4.88e-08,14;UBERON:0005095,4.88e-08,14;UBERON:0007687,4.88e-08,14;UBERON:0006554,1.13e-07,18;UBERON:0005153,2.58e-07,17;UBERON:0002100,3.63e-07,90;UBERON:0005409,5.98e-07,47;UBERON:0005178,8.09e-07,17;UBERON:0005181,8.09e-07,17;UBERON:0002224,8.09e-07,17;UBERON:0000915,8.09e-07,17;UBERON:0008947,8.09e-07,17;UBERON:0003258,8.09e-07,17 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,1.84667199103079,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,3.06155844543851,0.595745707205312,1.30599894569468,0.95995453676044,0.22940928106717,0.57423196411502,0,0.430942465371778,2.09025761402011,1.00812051903972,1.10865255327652,0,0,0,2.88851619751275,1.49611180822643,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0,0,5.79728977403356,0,0,0,0,0,1.96622188184453,0,0,0,0.281686839553361,0,0,0,2.38140145112336,4.30711771307668,4.54972000513305,2.51204535381932,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0,0.741584903203122,0,0.884610551949874,0,0,0,5.59175283654366,0,0,2.04365644166873,3.71426885968353,0.599902730993408,2.41433431438823,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,1.01839363850316,4.22983700074316,16.1742565397552,15.993581047372,0.130120442962704,0,0.360124259610698,0,0.136072998302656,0.12811372028485,0.281105173679186,4.65666067330228,0.215567992932842,0.189106080167819,0.351902248327898,1.31517439456545,1.66828349535359,2.43776516565517,1.4404749548556,0.995171334092466,0.702213187313235,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0,1.32167513193519,1.58670339998127,0.213288250535234,0.696710015581316,1.15980715189884,1.21010114774006,2.2237804384487,2.47293313946327,2.84717436926707,3.45867804920423,5.27803938480566,6.56556357735798,6.82374304916921,1.79763881730844,2.80979464837102,2.78797782556114,0.948339504765408,1.71372768914593,1.1270773567308,3.86937522906097,6.98228953803453,6.59276706968994,17.2635746349222,16.0895061297766,13.9728867778824,9.87177311374404,0,0.166845105716094,0.196558995113203,0,0,0.72353147925725,0,0.863088412352432,1.62135226775035,1.09824565275233,0,1.86070473834252,1.5601883655728,0.757736633841335,0.538192240565737,0.482443521363367,5.35784251483154,0.189491411770485,0.488894929326078,2.37643120085263,1.64283173801951,1.67506257441816,2.61848004974615,3.31727201358258,3.4679731703362,3.76489972402917,2.39182152986231,3.4411296090305,3.28101465545202,3.90552458170081,0,0,10.8188140064188,14.9005843004556,0.321101179975584,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,1.27746076687442,0.712262414669021,0.488660878060728,4.12425307431339,5.30980553359851,1.94224508923985,4.53485335447127,4.14931175462976,4.72483028609236,4.30409207121498,2.84271122485043,3.99887102425256,2.85197902707777,6.63677191665214,6.32511651449993,5.15677716240934,0.340439605753788,0,0.258717367565509,0.643011105094777,0.532020700926821,0.178368817602071,0.329098041204242,0.913394847343798,0,0.21183207086382,3.52845436887939,8.57408515295696,4.35953952078945,6.09160541774374,11.4597450243011,12.9671310798598,3.78925087618806,0.18542530201051,0.170870880797853,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0,9.5187920796559,10.636310376598,11.8851977471804,9.54670618015114,0.158167996790568,1.82987520414164,2.80813886136683,3.3454127362315,5.02233896616208,4.98998081623837,4.3806331534428,5.23511883968059,0.648074866458964,24.2322332103901,0,0,0.165458490457098,0,0,0,0.234714477291508,0.39061315453185,0,0.241584120826006,0.576060012515731,0.948033361884535,2.02725215290164,2.36235201479103,1.81889152168913,1.61124026100733,1.39076948346885,1.20195449519969,1.03382669022204,2.22126189885925,2.057583779685,1.41156659191577,1.55932609183604,1.25075394132428,2.57129184799452,3.40095575422817,0,0,0,5.79568782096571,4.129014459926,4.02933573387983,6.85978813053011,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.972426868273176,0.209613162627982,0.183843508450014,1.33348036680969,1.03017528619447,0.962757628775446,0.252697211763798,1.2673964994512,0.754505365544305,0.655490552289177,0.512201219238954,1.03383844120104,1.42888107384922,0.463537303779422,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,0.532427418478012,0.953744759789284,0.581385666529314,0.470546902076653,1.26921911837515,0.365855945745545,1.8414879800649,0.950628796921032,0.561142271657738,0.711810108745045,0.788035859004508,0.409231043169689,0.464810523557898,2.3148793317737,0.249810577937946,1.87145286756327,3.22306581072447,0.57386499620653,1.76473135295612,0.695603506861264 | |||
|short_description=p8@Gpr56 | |||
}} |
Latest revision as of 00:48, 26 September 2015
Short description: | p8@Gpr56 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Gpr56_5end |
Coexpression cluster: | MCL_coexpression_mm9:1484 |
Association with transcript: | 221bp_to_NM_001198894, uc009mxl.2, uc009mxm.2_5end |
EntrezGene: | Gpr56 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 3.55e-11 | 114 |
digestive system | 1.22e-10 | 116 |
digestive tract | 1.22e-10 | 116 |
primitive gut | 1.22e-10 | 116 |
endoderm-derived structure | 3.99e-10 | 118 |
endoderm | 3.99e-10 | 118 |
presumptive endoderm | 3.99e-10 | 118 |
trunk region element | 1.31e-08 | 79 |
pancreas | 1.33e-08 | 12 |
renal system | 2.09e-08 | 19 |
kidney | 4.88e-08 | 14 |
kidney mesenchyme | 4.88e-08 | 14 |
upper urinary tract | 4.88e-08 | 14 |
kidney rudiment | 4.88e-08 | 14 |
kidney field | 4.88e-08 | 14 |
urinary system structure | 1.13e-07 | 18 |
epithelial bud | 2.58e-07 | 17 |
trunk | 3.63e-07 | 90 |
gastrointestinal system | 5.98e-07 | 47 |
thoracic cavity element | 8.09e-07 | 17 |
thoracic segment organ | 8.09e-07 | 17 |
thoracic cavity | 8.09e-07 | 17 |
thoracic segment of trunk | 8.09e-07 | 17 |
respiratory primordium | 8.09e-07 | 17 |
endoderm of foregut | 8.09e-07 | 17 |