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FFCP PHASE1:Mm9::chr4:122563272..122563283,-: Difference between revisions

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{{FFCP|EntrezGene=12331|HGNC=|MCL_coexpression_id=3|UniProt=P40124|association_with_transcript=3bp_to_ENSMUST00000106255_5end|description=CAGE_peak_5_at_Cap1_5end|id=chr4:122563272..122563283,-|ontology_enrichment_celltype=CL:0000738!7.79e-07!17;CL:0002087!7.79e-07!17|ontology_enrichment_celltype_v019_2=CL:0000738,3.44e-07,17;CL:0002087,3.44e-07,17;CL:0000838,8.79e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.74e-13!45;UBERON:0003061!9.74e-13!45;UBERON:0002193!6.35e-12!48;UBERON:0004177!2.57e-10!29;UBERON:0002370!1.55e-09!23;UBERON:0000974!1.55e-09!23;UBERON:0004807!1.55e-09!23;UBERON:0005058!1.55e-09!23;UBERON:0003351!1.55e-09!23;UBERON:0009113!1.55e-09!23;UBERON:0003295!1.55e-09!23;UBERON:0009722!1.55e-09!23;UBERON:0005562!1.55e-09!23;UBERON:0007690!1.55e-09!23;UBERON:0006562!1.70e-09!24;UBERON:0001557!1.70e-09!24;UBERON:0001042!1.70e-09!24;UBERON:0008814!1.70e-09!24;UBERON:0009145!1.70e-09!24;UBERON:0003408!2.27e-08!24;UBERON:0000065!5.84e-08!41;UBERON:0000072!8.62e-08!27;UBERON:0001004!3.21e-07!42;UBERON:0003081!9.49e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.78e-14,45;UBERON:0003061,3.78e-14,45;UBERON:0002193,3.35e-13,48;UBERON:0002405,3.35e-13,48;UBERON:0004177,1.37e-11,29;UBERON:0005057,1.37e-11,29;UBERON:0002370,6.93e-11,23;UBERON:0000974,6.93e-11,23;UBERON:0004807,6.93e-11,23;UBERON:0005058,6.93e-11,23;UBERON:0003351,6.93e-11,23;UBERON:0009113,6.93e-11,23;UBERON:0003295,6.93e-11,23;UBERON:0009722,6.93e-11,23;UBERON:0005562,6.93e-11,23;UBERON:0007690,6.93e-11,23;UBERON:0006562,7.98e-11,24;UBERON:0001557,7.98e-11,24;UBERON:0001042,7.98e-11,24;UBERON:0008814,7.98e-11,24;UBERON:0009145,7.98e-11,24;UBERON:0003408,6.42e-10,24;UBERON:0000926,1.21e-09,120;UBERON:0004120,1.21e-09,120;UBERON:0006603,1.21e-09,120;UBERON:0000077,1.42e-09,35;UBERON:0000072,5.04e-09,27;UBERON:0000065,1.06e-08,41;UBERON:0001004,3.90e-08,42;UBERON:0003081,3.00e-07,87|phase1_expression=2.08193501236232,2.09385244583617,0.909998478779072,0,0.500895729946347,0.503637815735669,0,4.9066862907799,12.248618827195,13.3416780003536,3.4243593645101,2.79202556483677,5.82082481766099,5.33264454755884,1.99865857089398,0.809901069559304,0,4.41647031501533,4.2505474417779,3.39511721438424,2.04103896362567,1.48936426801328,1.56719873483361,0.159992422793407,0.91763712426868,0.57423196411502,0.430761996159075,1.07735616342945,0.570070258369122,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.332469290716985,0.612508068787107,22.600708059793,17.9707129240474,17.7998072951091,27.6468799374577,28.6879103682547,28.6451108288381,0.629484089877886,0.506884656097573,1.46837401729345,1.56478268869608,2.61630187656536,0.439372365468944,0.388859798148567,1.25987779462826,2.87505128729943,6.04017381807851,7.97898356212479,2.35265659399725,0.771778308107841,0.573066879877513,1.03134418455488,1.41621522601718,1.05798195854407,0,1.69422266034566,0.889294796111139,4.04954872776629,3.9554654502679,2.8419204597844,3.59520132622086,1.92109152660777,2.59224030771194,2.16009501330705,3.15487442027073,2.57085885963423,1.32521124570968,0.979926393719632,2.20444583341944,1.83843757322004,1.10115880999389,1.27687338085188,1.53606533256243,0.923204014111357,1.37231465403614,1.04182674111352,2.23346399201105,1.12552522006336,1.5279824777681,0.883885756421003,1.70846016958924,1.3047961207771,1.28734528666413,0.982430281388212,2.02905142091174,0.860423876981386,0,0,0,0,0.561777680527007,1.36344258062446,0.259786004602869,1.7666978725517,0.704217098883403,0,2.54805239706646,0,0.432982082022428,1.01343946190039,1.01104889002957,1.37020655662872,4.40194402200192,0.742210695324124,1.56136794089522,0.913396434936424,0.691846491768175,0.452167921657868,0.940709657085638,0.251333182659351,0.247194967734374,0.433798070759735,2.65383165584962,1.61766849947409,1.76673214768315,1.93950101254089,0,1.75668478206928,0.83778682725382,0.766371165625774,2.75574786363617,3.59941638596045,1.90605340609597,1.3481157546434,5.94750783664214,1.7591609295801,1.39059456153821,2.81287003063364,1.24672826735736,3.0825839982874,1.62942982160506,1.61729061793121,0.252722758433675,0.210441855886474,0.260240885925407,0.919608417733892,0.900310649026746,0.452114453507145,0.544291993210623,0.768682321709099,0.468508622798644,0.776110112217047,0.862271971731369,1.32374256117473,1.23165786914764,1.31517439456545,0,2.78601733217733,1.4404749548556,1.99034266818493,0.702213187313235,2.05878325691772,1.42081749697796,0.828503090142008,0.703578179943289,1.08037236876609,1.18372367792605,0.787056926989615,1.69693824176116,1.39520366850245,1.87791380979733,1.40118410840603,0.987359099480883,1.64167464079095,1.37816976227955,2.63159977365598,1.09775057645525,0.402619256281115,3.99550902271842,1.9551876352064,0.991256348951394,0.528901133327089,0.639864751605702,0.696710015581316,1.15980715189884,0.80673409849337,0.667134131534611,0.570676878337677,1.89811624617805,0.494096864172033,0.754005626400808,0.99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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12331
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=P40124
|association_with_transcript=3bp_to_ENSMUST00000106255_5end
|cluster_id=chr4:122563272..122563283,-
|description=CAGE_peak_5_at_Cap1_5end
|id=chr4:122563272..122563283,-
|ontology_enrichment_celltype=CL:0000738!7.79e-07!17;CL:0002087!7.79e-07!17
|ontology_enrichment_celltype_v019_2=CL:0000738,3.44e-07,17;CL:0002087,3.44e-07,17;CL:0000838,8.79e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!9.74e-13!45;UBERON:0003061!9.74e-13!45;UBERON:0002193!6.35e-12!48;UBERON:0004177!2.57e-10!29;UBERON:0002370!1.55e-09!23;UBERON:0000974!1.55e-09!23;UBERON:0004807!1.55e-09!23;UBERON:0005058!1.55e-09!23;UBERON:0003351!1.55e-09!23;UBERON:0009113!1.55e-09!23;UBERON:0003295!1.55e-09!23;UBERON:0009722!1.55e-09!23;UBERON:0005562!1.55e-09!23;UBERON:0007690!1.55e-09!23;UBERON:0006562!1.70e-09!24;UBERON:0001557!1.70e-09!24;UBERON:0001042!1.70e-09!24;UBERON:0008814!1.70e-09!24;UBERON:0009145!1.70e-09!24;UBERON:0003408!2.27e-08!24;UBERON:0000065!5.84e-08!41;UBERON:0000072!8.62e-08!27;UBERON:0001004!3.21e-07!42;UBERON:0003081!9.49e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.78e-14,45;UBERON:0003061,3.78e-14,45;UBERON:0002193,3.35e-13,48;UBERON:0002405,3.35e-13,48;UBERON:0004177,1.37e-11,29;UBERON:0005057,1.37e-11,29;UBERON:0002370,6.93e-11,23;UBERON:0000974,6.93e-11,23;UBERON:0004807,6.93e-11,23;UBERON:0005058,6.93e-11,23;UBERON:0003351,6.93e-11,23;UBERON:0009113,6.93e-11,23;UBERON:0003295,6.93e-11,23;UBERON:0009722,6.93e-11,23;UBERON:0005562,6.93e-11,23;UBERON:0007690,6.93e-11,23;UBERON:0006562,7.98e-11,24;UBERON:0001557,7.98e-11,24;UBERON:0001042,7.98e-11,24;UBERON:0008814,7.98e-11,24;UBERON:0009145,7.98e-11,24;UBERON:0003408,6.42e-10,24;UBERON:0000926,1.21e-09,120;UBERON:0004120,1.21e-09,120;UBERON:0006603,1.21e-09,120;UBERON:0000077,1.42e-09,35;UBERON:0000072,5.04e-09,27;UBERON:0000065,1.06e-08,41;UBERON:0001004,3.90e-08,42;UBERON:0003081,3.00e-07,87
|phase1_expression=2.08193501236232,2.09385244583617,0.909998478779072,0,0.500895729946347,0.503637815735669,0,4.9066862907799,12.248618827195,13.3416780003536,3.4243593645101,2.79202556483677,5.82082481766099,5.33264454755884,1.99865857089398,0.809901069559304,0,4.41647031501533,4.2505474417779,3.39511721438424,2.04103896362567,1.48936426801328,1.56719873483361,0.159992422793407,0.91763712426868,0.57423196411502,0.430761996159075,1.07735616342945,0.570070258369122,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.332469290716985,0.612508068787107,22.600708059793,17.9707129240474,17.7998072951091,27.6468799374577,28.6879103682547,28.6451108288381,0.629484089877886,0.506884656097573,1.46837401729345,1.56478268869608,2.61630187656536,0.439372365468944,0.388859798148567,1.25987779462826,2.87505128729943,6.04017381807851,7.97898356212479,2.35265659399725,0.771778308107841,0.573066879877513,1.03134418455488,1.41621522601718,1.05798195854407,0,1.69422266034566,0.889294796111139,4.04954872776629,3.9554654502679,2.8419204597844,3.59520132622086,1.92109152660777,2.59224030771194,2.16009501330705,3.15487442027073,2.57085885963423,1.32521124570968,0.979926393719632,2.20444583341944,1.83843757322004,1.10115880999389,1.27687338085188,1.53606533256243,0.923204014111357,1.37231465403614,1.04182674111352,2.23346399201105,1.12552522006336,1.5279824777681,0.883885756421003,1.70846016958924,1.3047961207771,1.28734528666413,0.982430281388212,2.02905142091174,0.860423876981386,0,0,0,0,0.561777680527007,1.36344258062446,0.259786004602869,1.7666978725517,0.704217098883403,0,2.54805239706646,0,0.432982082022428,1.01343946190039,1.01104889002957,1.37020655662872,4.40194402200192,0.742210695324124,1.56136794089522,0.913396434936424,0.691846491768175,0.452167921657868,0.940709657085638,0.251333182659351,0.247194967734374,0.433798070759735,2.65383165584962,1.61766849947409,1.76673214768315,1.93950101254089,0,1.75668478206928,0.83778682725382,0.766371165625774,2.75574786363617,3.59941638596045,1.90605340609597,1.3481157546434,5.94750783664214,1.7591609295801,1.39059456153821,2.81287003063364,1.24672826735736,3.0825839982874,1.62942982160506,1.61729061793121,0.252722758433675,0.210441855886474,0.260240885925407,0.919608417733892,0.900310649026746,0.452114453507145,0.544291993210623,0.768682321709099,0.468508622798644,0.776110112217047,0.862271971731369,1.32374256117473,1.23165786914764,1.31517439456545,0,2.78601733217733,1.4404749548556,1.99034266818493,0.702213187313235,2.05878325691772,1.42081749697796,0.828503090142008,0.703578179943289,1.08037236876609,1.18372367792605,0.787056926989615,1.69693824176116,1.39520366850245,1.87791380979733,1.40118410840603,0.987359099480883,1.64167464079095,1.37816976227955,2.63159977365598,1.09775057645525,0.402619256281115,3.99550902271842,1.9551876352064,0.991256348951394,0.528901133327089,0.639864751605702,0.696710015581316,1.15980715189884,0.80673409849337,0.667134131534611,0.570676878337677,1.89811624617805,0.494096864172033,0.754005626400808,0.994782360205754,1.16978452271472,1.79763881730844,0.648414149624083,0.597423819763102,2.0863469104839,0.799739588268102,1.1270773567308,1.01825663922657,1.74557238450863,1.68325967736765,1.7706230394792,0.885660887877613,0.470996183524124,0.246794327843601,0.889357881261447,1.00107063429656,1.17935397067922,0.674586337154561,0.608580364165509,0.964708639009667,0.50925170356284,1.43848068725405,1.78348749452539,0.274561413188081,1.43768206527355,0.744281895337007,1.5601883655728,0.757736633841335,0,0,2.03228509183265,1.70542270593436,0.977789858652155,1.18821560042632,0.704070744865506,1.50755631697634,1.19021820443007,1.75620283072019,1.10344600874334,2.43611158613652,1.75400245523236,1.63863314715738,2.76295970985433,2.31438493730419,3.01582567878545,2.17562273527484,0.491764273019036,0.275936746304732,1.44495530989013,1.40654023910644,2.29508923527346,0.757412781613119,0.315508219416257,0.780877488593277,0.646270193198397,0.955875191810208,0.668396022247182,0.566153061577665,0,0,1.58115111178609,1.60660658210904,1.70328102249922,1.78065603667255,2.11753047159649,1.81467135269789,0,1.21390318077491,1.209294227859,0.565815239267694,1.77181135728464,0.614870295887855,1.80899805217755,1.09060118843252,0.712994756769443,0.316036757935816,2.10837217149998,0,0.340439605753788,0.720244376125241,1.29358683782755,1.50035924522115,0.886701168211368,0.535106452806212,1.15184314421485,1.2178597964584,1.64270195644597,0,0.220528398054962,0.65954501176592,1.93757312035087,1.08563264870681,1.55184047204077,1.14898629821543,0.874442509889552,0.927126510052548,2.73393409276564,2.47664241555867,2.77791791054568,2.0720530270516,0.683471138605126,2.0590035588587,5.94924504978494,3.91864066506242,6.21899882119907,1.90934123603023,1.10717597753397,1.62655573701479,0.648032044930808,0.418176592028937,1.09181281873089,0.809186078308924,0.991841468704031,3.14107130380836,0.777689839750757,0,1.12738587736838,1.49516546043979,2.64733584731356,2.13896307178452,1.80823752868824,1.18269287843545,2.93393096614385,3.51551839078665,2.51662426621706,2.89900944991207,3.45636007509439,5.37218905067903,2.02725215290164,3.90301637226344,2.5984164595559,2.68540043501222,6.75516606256301,6.49055427407832,5.46451250545936,6.86571859647404,6.02033772574499,7.05783295957884,5.16526767920688,6.83104075646339,7.12949103307571,1.58711268530648,0.443971906748129,0.538283139656854,0.335769232728157,0.579568782096571,1.31377732815827,2.19781949120718,1.71494703263253,0,0,2.30162618253588,0.572895513439397,1.03111909406213,2.05524755931193,3.0215755895588,3.37511250115903,1.80128481289688,2.26571204492102,1.55328093525546,0.62272408550506,0.798049746802062,2.56100408631201,1.45864030240976,1.25767897576789,0.735374033800057,1.33348036680969,1.03017528619447,1.60459604795908,0,0.25347929989024,1.13175804831646,0.749132059759059,0.832326981263301,1.37845125493472,1.42888107384922,1.0429589335037,0.964546102318525,0.824171801606613,1.32479028120958,1.02860775715625,0.532427418478012,0.953744759789284,0.436039249896986,1.50575008664529,0.592302255241736,0.914639864363863,0.789209134313529,1.22223702461276,0.561142271657738,1.30498519936592,0.689531376628944,1.63692417267876,1.85924209423159,0.964533054905707,0.249810577937946,0.701794825336225,1.28922632428979,1.3390183244819,2.42650561031467,0.927471342481686
|short_description=p5@Cap1
}}

Latest revision as of 07:15, 26 September 2015

Short description:p5@Cap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Cap1_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 3bp_to_ENSMUST00000106255_5end
EntrezGene:Cap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Cap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.79
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G822.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.80
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H428.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C72.76
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.22
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I23.90
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F86.49
thymus, neonate N03.CNhs11137.2104-43C75.46
thymus, neonate N06.CNhs11197.681-26C46.87
thymus, neonate N07.CNhs11211.713-19D36.02
thymus, neonate N10.CNhs11194.748-24E47.06
thymus, neonate N20.CNhs11186.820-7A25.17
thymus, neonate N25.CNhs11125.1362-25G76.83
thymus, neonate N30.CNhs11132.1393-42G27.13
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
leukocyte3.44e-0717
nongranular leukocyte3.44e-0717
lymphoid lineage restricted progenitor cell8.79e-0712

Uber anatomy
Ontology termp-valuen
hematopoietic system3.78e-1445
blood island3.78e-1445
hemolymphoid system3.35e-1348
immune system3.35e-1348
hemopoietic organ1.37e-1129
immune organ1.37e-1129
thymus6.93e-1123
neck6.93e-1123
respiratory system epithelium6.93e-1123
hemolymphoid system gland6.93e-1123
pharyngeal epithelium6.93e-1123
thymic region6.93e-1123
pharyngeal gland6.93e-1123
entire pharyngeal arch endoderm6.93e-1123
thymus primordium6.93e-1123
early pharyngeal endoderm6.93e-1123
pharynx7.98e-1124
upper respiratory tract7.98e-1124
chordate pharynx7.98e-1124
pharyngeal arch system7.98e-1124
pharyngeal region of foregut7.98e-1124
gland of gut6.42e-1024
mesoderm1.21e-09120
mesoderm-derived structure1.21e-09120
presumptive mesoderm1.21e-09120
mixed endoderm/mesoderm-derived structure1.42e-0935
segment of respiratory tract5.04e-0927
respiratory tract1.06e-0841
respiratory system3.90e-0842
lateral plate mesoderm3.00e-0787
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