FFCP PHASE2:Mm9::chr7:17502533..17502561,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:12313,entrezgene:12314,entrezgene:12315 |HGNC= |MCL_coexpression_id=741 |TSSclassifier=NA |UniProt=uniprot:G3UZ90 |...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=12313,12314,12315 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=741 | |MCL_coexpression_id=741 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=G3UZ90 | ||
|association_with_transcript=0bp_to_ENSMUST00000173139_5end | |association_with_transcript=0bp_to_ENSMUST00000173139_5end | ||
|cluster_id=chr7:17502533..17502561,- | |cluster_id=chr7:17502533..17502561,- | ||
Latest revision as of 07:22, 26 September 2015
| Short description: | p5@Calm2, p6@Calm3, p7@Calm1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Calm2_5end, CAGE_peak_6_at_Calm3_5end, CAGE_peak_7_at_Calm1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:741 |
| Association with transcript: | 0bp_to_ENSMUST00000173139_5end |
| EntrezGene: | 12313,12314,12315 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p5@Calm2p6@Calm3p7@Calm1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 7.18e-16 | 43 |
| ectodermal cell | 3.56e-15 | 44 |
| neurectodermal cell | 3.56e-15 | 44 |
| electrically responsive cell | 4.67e-15 | 39 |
| electrically active cell | 4.67e-15 | 39 |
| CNS neuron (sensu Vertebrata) | 5.81e-15 | 23 |
| neuroblast (sensu Vertebrata) | 5.81e-15 | 23 |
| neuron | 1.59e-12 | 33 |
| neuronal stem cell | 1.59e-12 | 33 |
| neuroblast | 1.59e-12 | 33 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 1.63e-30 | 73 |
| nervous system | 5.54e-29 | 75 |
| regional part of nervous system | 2.26e-25 | 54 |
| neural tube | 1.32e-23 | 52 |
| neural rod | 1.32e-23 | 52 |
| future spinal cord | 1.32e-23 | 52 |
| neural keel | 1.32e-23 | 52 |
| gray matter | 2.98e-22 | 34 |
| neurectoderm | 1.28e-20 | 64 |
| neural plate | 1.28e-20 | 64 |
Showing 1 to 10 of 37 entries
