FFCP PHASE1:Mm9::chr5:89104215..89104252,-: Difference between revisions
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{{FFCP|EntrezGene=231413|HGNC=|MCL_coexpression_id=79|UniProt=D3YV30|association_with_transcript=0bp_to_ENSMUST00000133532,ENSMUST00000137725_5end|description=CAGE_peak_8_at_Grsf1_5end|id=chr5:89104215..89104252,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,5.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.07e-11!18;UBERON:0000948!7.07e-11!18;UBERON:0005498!7.07e-11!18;UBERON:0004140!7.07e-11!18;UBERON:0009881!7.07e-11!18;UBERON:0004141!7.07e-11!18;UBERON:0003084!7.07e-11!18;UBERON:0007005!7.07e-11!18;UBERON:0004139!7.07e-11!18;UBERON:0004291!7.07e-11!18;UBERON:0003103!4.42e-09!43;UBERON:0004535!2.10e-08!23;UBERON:0001009!2.10e-08!23;UBERON:0003914!1.00e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0003103,4.38e-21,43;UBERON:0007100,1.06e-19,18;UBERON:0000948,1.06e-19,18;UBERON:0005498,1.06e-19,18;UBERON:0004140,1.06e-19,18;UBERON:0009881,1.06e-19,18;UBERON:0004141,1.06e-19,18;UBERON:0003084,1.06e-19,18;UBERON:0007005,1.06e-19,18;UBERON:0004139,1.06e-19,18;UBERON:0004291,1.06e-19,18;UBERON:0004535,2.62e-17,23;UBERON:0001009,2.62e-17,23;UBERON:0004872,5.11e-11,33;UBERON:0010314,2.06e-09,92;UBERON:0003914,5.98e-09,47;UBERON:0002950,1.76e-08,4;UBERON:0001891,1.76e-08,4;UBERON:0009616,1.76e-08,4;UBERON:0010286,1.76e-08,4;UBERON:0000025,5.20e-08,114;UBERON:0004111,6.72e-08,122;UBERON:0002113,4.16e-07,14;UBERON:0003918,4.16e-07,14;UBERON:0011143,4.16e-07,14;UBERON:0005095,4.16e-07,14;UBERON:0007687,4.16e-07,14;UBERON:0002038,5.17e-07,3;UBERON:0009663,5.17e-07,3;UBERON:0009661,5.17e-07,3;UBERON:0000125,5.17e-07,3;UBERON:0002308,5.17e-07,3|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40456071893706,2.61131106535614,0,0,0,2.51264699101243,2.8138130501584,1.06958773443767,0.294628585473668,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,1.34408066129201,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0.502666365318702,0,4.916378135277,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,1.37250180845588,0,0.521472960576829,0.511430914660661,3.1168206683934,1.94689515681309,0,0,0.252722758433675,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0.414251545071004,1.64168241986767,0.900310307305074,2.3674473558521,1.37734962223183,2.46827380619805,2.79040733700489,4.02410102099429,3.03589890154641,5.59503489705834,10.342550236983,8.83650024049827,8.62579925809461,9.87975518809728,6.57611451925822,0.210289948564127,0,0,0.528901133327089,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,2.03651327845314,1.55161989734101,1.82353131714828,2.97211724484009,5.60918562322488,5.49495547444812,5.18268088471562,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.972811360650212,0.274561413188081,0,1.48856379067401,0.312037673114561,0.757736633841335,0.717589654087649,0.964887042726734,0,0,0,0,0,0.335012514883631,0.476087281772027,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,2.72936002979246,2.10981035865966,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.201652370273681,0.0974578807397524,0,0,2.72076460338254,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,1.81256963593682,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.565879024158229,0.655490552289177,0.384150914429216,0.918967503289812,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.752875043322645,0.761531471025089,0.365855945745545,0.526139422875686,0.407412341537585,2.24456908663095,1.06771516311757,0.788035859004508,0.818462086339379,0.619747364743864,0.771626443924566,0,0.233931608445408,0.859484216193193,0.57386499620653,0.441182838239031,1.62307484934295|short_description=p8@Grsf1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231413 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=D3YV30 | |||
|association_with_transcript=0bp_to_ENSMUST00000133532,ENSMUST00000137725_5end | |||
|cluster_id=chr5:89104215..89104252,- | |||
|description=CAGE_peak_8_at_Grsf1_5end | |||
|id=chr5:89104215..89104252,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,5.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.07e-11!18;UBERON:0000948!7.07e-11!18;UBERON:0005498!7.07e-11!18;UBERON:0004140!7.07e-11!18;UBERON:0009881!7.07e-11!18;UBERON:0004141!7.07e-11!18;UBERON:0003084!7.07e-11!18;UBERON:0007005!7.07e-11!18;UBERON:0004139!7.07e-11!18;UBERON:0004291!7.07e-11!18;UBERON:0003103!4.42e-09!43;UBERON:0004535!2.10e-08!23;UBERON:0001009!2.10e-08!23;UBERON:0003914!1.00e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,4.38e-21,43;UBERON:0007100,1.06e-19,18;UBERON:0000948,1.06e-19,18;UBERON:0005498,1.06e-19,18;UBERON:0004140,1.06e-19,18;UBERON:0009881,1.06e-19,18;UBERON:0004141,1.06e-19,18;UBERON:0003084,1.06e-19,18;UBERON:0007005,1.06e-19,18;UBERON:0004139,1.06e-19,18;UBERON:0004291,1.06e-19,18;UBERON:0004535,2.62e-17,23;UBERON:0001009,2.62e-17,23;UBERON:0004872,5.11e-11,33;UBERON:0010314,2.06e-09,92;UBERON:0003914,5.98e-09,47;UBERON:0002950,1.76e-08,4;UBERON:0001891,1.76e-08,4;UBERON:0009616,1.76e-08,4;UBERON:0010286,1.76e-08,4;UBERON:0000025,5.20e-08,114;UBERON:0004111,6.72e-08,122;UBERON:0002113,4.16e-07,14;UBERON:0003918,4.16e-07,14;UBERON:0011143,4.16e-07,14;UBERON:0005095,4.16e-07,14;UBERON:0007687,4.16e-07,14;UBERON:0002038,5.17e-07,3;UBERON:0009663,5.17e-07,3;UBERON:0009661,5.17e-07,3;UBERON:0000125,5.17e-07,3;UBERON:0002308,5.17e-07,3 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40456071893706,2.61131106535614,0,0,0,2.51264699101243,2.8138130501584,1.06958773443767,0.294628585473668,0,0,0,0,0,0,0.679971333707751,0,0.649776417447669,1.34408066129201,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0.502666365318702,0,4.916378135277,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,1.04853447583376,1.37250180845588,0,0.521472960576829,0.511430914660661,3.1168206683934,1.94689515681309,0,0,0.252722758433675,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0.414251545071004,1.64168241986767,0.900310307305074,2.3674473558521,1.37734962223183,2.46827380619805,2.79040733700489,4.02410102099429,3.03589890154641,5.59503489705834,10.342550236983,8.83650024049827,8.62579925809461,9.87975518809728,6.57611451925822,0.210289948564127,0,0,0.528901133327089,0,0,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,2.03651327845314,1.55161989734101,1.82353131714828,2.97211724484009,5.60918562322488,5.49495547444812,5.18268088471562,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.972811360650212,0.274561413188081,0,1.48856379067401,0.312037673114561,0.757736633841335,0.717589654087649,0.964887042726734,0,0,0,0,0,0.335012514883631,0.476087281772027,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,2.72936002979246,2.10981035865966,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.201652370273681,0.0974578807397524,0,0,2.72076460338254,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0,0.675022500231806,0.45032120322422,1.81256963593682,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.565879024158229,0.655490552289177,0.384150914429216,0.918967503289812,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.752875043322645,0.761531471025089,0.365855945745545,0.526139422875686,0.407412341537585,2.24456908663095,1.06771516311757,0.788035859004508,0.818462086339379,0.619747364743864,0.771626443924566,0,0.233931608445408,0.859484216193193,0.57386499620653,0.441182838239031,1.62307484934295 | |||
|short_description=p8@Grsf1 | |||
}} |
Latest revision as of 07:32, 26 September 2015
Short description: | p8@Grsf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Grsf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000133532, ENSMUST00000137725_5end |
EntrezGene: | Grsf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 5.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
compound organ | 4.38e-21 | 43 |
primary circulatory organ | 1.06e-19 | 18 |
heart | 1.06e-19 | 18 |
primitive heart tube | 1.06e-19 | 18 |
primary heart field | 1.06e-19 | 18 |
anterior lateral plate mesoderm | 1.06e-19 | 18 |
heart tube | 1.06e-19 | 18 |
heart primordium | 1.06e-19 | 18 |
cardiac mesoderm | 1.06e-19 | 18 |
cardiogenic plate | 1.06e-19 | 18 |
heart rudiment | 1.06e-19 | 18 |
cardiovascular system | 2.62e-17 | 23 |
circulatory system | 2.62e-17 | 23 |
splanchnic layer of lateral plate mesoderm | 5.11e-11 | 33 |
structure with developmental contribution from neural crest | 2.06e-09 | 92 |
epithelial tube | 5.98e-09 | 47 |
regional part of midbrain | 1.76e-08 | 4 |
midbrain | 1.76e-08 | 4 |
presumptive midbrain | 1.76e-08 | 4 |
midbrain neural tube | 1.76e-08 | 4 |
tube | 5.20e-08 | 114 |
anatomical conduit | 6.72e-08 | 122 |
kidney | 4.16e-07 | 14 |
kidney mesenchyme | 4.16e-07 | 14 |
upper urinary tract | 4.16e-07 | 14 |
kidney rudiment | 4.16e-07 | 14 |
kidney field | 4.16e-07 | 14 |
substantia nigra | 5.17e-07 | 3 |
telencephalic nucleus | 5.17e-07 | 3 |
midbrain nucleus | 5.17e-07 | 3 |
neural nucleus | 5.17e-07 | 3 |
nucleus of brain | 5.17e-07 | 3 |