FFCP PHASE1:Mm9::chr7:19929891..19929904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13870 | |EntrezGene=13870 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=Q91VP3 | |UniProt=Q91VP3 | ||
|association_with_transcript=-222bp_to_ENSMUST00000003645_5end | |association_with_transcript=-222bp_to_ENSMUST00000003645_5end | ||
|cluster_id=chr7:19929891..19929904,+ | |||
|description=CAGE_peak_6_at_Ercc1_5end | |description=CAGE_peak_6_at_Ercc1_5end | ||
|id=chr7:19929891..19929904,+ | |id=chr7:19929891..19929904,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.16e-30,3;CL:0002202,1.16e-30,3;CL:0000069,1.16e-30,3;CL:0002632,1.16e-30,3;CL:0002368,1.16e-30,3;CL:0000307,1.16e-30,3;CL:0000377,1.16e-30,3;CL:0000349,1.75e-29,3;CL:0000351,1.75e-29,3;CL:0000213,8.99e-11,1;CL:0002078,8.99e-11,1;CL:0000115,8.99e-11,1;CL:0002262,8.99e-11,1;CL:1000398,8.99e-11,1;CL:0000223,2.70e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003975!4.45e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.16e-30,3;UBERON:0001005,1.16e-30,3;UBERON:0007196,1.16e-30,3;UBERON:0001558,1.16e-30,3;UBERON:0000358,1.75e-29,3;UBERON:0000307,1.75e-29,3;UBERON:0007010,1.75e-29,3;UBERON:0000305,3.65e-11,1;UBERON:0002394,8.99e-11,1;UBERON:0001281,8.99e-11,1;UBERON:0000353,8.99e-11,1;UBERON:0003497,8.99e-11,1;UBERON:0003909,8.99e-11,1;UBERON:0003928,8.99e-11,1;UBERON:0003835,8.99e-11,1;UBERON:0003513,8.99e-11,1;UBERON:0001280,8.99e-11,1;UBERON:0004647,8.99e-11,1;UBERON:0002294,8.99e-11,1;UBERON:0001173,8.99e-11,1;UBERON:0004912,8.99e-11,1;UBERON:0005171,8.99e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,1.44932244350839,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,8.87613268145978,10.1343946190039,7.58286667522175,0,0.776813650941515,0,0,0,0,0,0,0.125666591329675,2.22475470960936,0.433798070759735,0,0,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0.180062061461015,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,0,0,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0.509935289981566,0.979660166265606,0.829199842826543,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,1.55390167361845,1.88399098879899,1.51096154727671,0,0.375364950902364,0.73260649706906,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,1.44932244350839,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,8.87613268145978,10.1343946190039,7.58286667522175,0,0.776813650941515,0,0,0,0,0,0,0.125666591329675,2.22475470960936,0.433798070759735,0,0,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703578179943289,0.180062061461015,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,0,0,0,0.264450566663544,0,0,0.257734922644187,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0,0.509935289981566,0.979660166265606,0.829199842826543,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,1.55390167361845,1.88399098879899,1.51096154727671,0,0.375364950902364,0.73260649706906,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p6@Ercc1 | |short_description=p6@Ercc1 | ||
}} | }} |
Latest revision as of 08:25, 26 September 2015
Short description: | p6@Ercc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ercc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | -222bp_to_ENSMUST00000003645_5end |
EntrezGene: | Ercc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.16e-30 | 3 |
epithelial cell of tracheobronchial tree | 1.16e-30 | 3 |
branched duct epithelial cell | 1.16e-30 | 3 |
epithelial cell of lower respiratory tract | 1.16e-30 | 3 |
respiratory epithelial cell | 1.16e-30 | 3 |
tracheal epithelial cell | 1.16e-30 | 3 |
tracheoblast | 1.16e-30 | 3 |
extraembryonic cell | 1.75e-29 | 3 |
trophoblast cell | 1.75e-29 | 3 |
lining cell | 8.99e-11 | 1 |
meso-epithelial cell | 8.99e-11 | 1 |
endothelial cell | 8.99e-11 | 1 |
endothelial cell of sinusoid | 8.99e-11 | 1 |
endothelial cell of hepatic sinusoid | 8.99e-11 | 1 |
endodermal cell | 2.70e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.16e-30 | 3 |
respiratory airway | 1.16e-30 | 3 |
tracheobronchial tree | 1.16e-30 | 3 |
lower respiratory tract | 1.16e-30 | 3 |
blastocyst | 1.75e-29 | 3 |
blastula | 1.75e-29 | 3 |
cleaving embryo | 1.75e-29 | 3 |
amnion | 3.65e-11 | 1 |
bile duct | 8.99e-11 | 1 |
hepatic sinusoid | 8.99e-11 | 1 |
parenchyma | 8.99e-11 | 1 |
abdomen blood vessel | 8.99e-11 | 1 |
sinusoid | 8.99e-11 | 1 |
digestive system duct | 8.99e-11 | 1 |
abdominal segment blood vessel | 8.99e-11 | 1 |
trunk blood vessel | 8.99e-11 | 1 |
liver parenchyma | 8.99e-11 | 1 |
liver lobule | 8.99e-11 | 1 |
biliary system | 8.99e-11 | 1 |
biliary tree | 8.99e-11 | 1 |
biliary bud | 8.99e-11 | 1 |
hepatic duct | 8.99e-11 | 1 |