FFCP PHASE1:Mm9::chr2:18919757..18919829,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18718 | |EntrezGene=18718 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2341 | |||
|TSSclassifier=NA | |||
|UniProt=O70172 | |UniProt=O70172 | ||
|association_with_transcript=-4bp_to_ENSMUST00000006912_5end | |association_with_transcript=-4bp_to_ENSMUST00000006912_5end | ||
|cluster_id=chr2:18919757..18919829,- | |||
|description=CAGE_peak_2_at_Pip4k2a_5end | |description=CAGE_peak_2_at_Pip4k2a_5end | ||
|id=chr2:18919757..18919829,- | |id=chr2:18919757..18919829,- | ||
|ontology_enrichment_celltype=CL:0000988!5.23e-08!32;CL:0002032!5.23e-08!32;CL:0000037!5.23e-08!32;CL:0000566!5.23e-08!32;CL:0000837!5.23e-08!32;CL:0002031!1.40e-07!25;CL:0000838!5.00e-07!12;CL:0000738!5.72e-07!17;CL:0002087!5.72e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.22e-08,32;CL:0002032,4.22e-08,32;CL:0000037,4.22e-08,32;CL:0000837,4.22e-08,32;CL:0002031,1.11e-07,25;CL:0000838,4.93e-07,12;CL:0000738,5.64e-07,17;CL:0002087,5.64e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-17!45;UBERON:0003061!1.49e-17!45;UBERON:0002193!1.57e-17!48;UBERON:0002405!1.13e-13!70;UBERON:0004177!6.39e-13!29;UBERON:0002370!7.65e-11!23;UBERON:0000974!7.65e-11!23;UBERON:0004807!7.65e-11!23;UBERON:0005058!7.65e-11!23;UBERON:0003351!7.65e-11!23;UBERON:0009113!7.65e-11!23;UBERON:0003295!7.65e-11!23;UBERON:0009722!7.65e-11!23;UBERON:0005562!7.65e-11!23;UBERON:0007690!7.65e-11!23;UBERON:0003408!1.52e-10!24;UBERON:0006562!6.63e-10!24;UBERON:0001557!6.63e-10!24;UBERON:0001042!6.63e-10!24;UBERON:0008814!6.63e-10!24;UBERON:0009145!6.63e-10!24;UBERON:0005057!8.38e-09!51;UBERON:0003081!1.36e-07!88;UBERON:0007811!5.67e-07!86;UBERON:0000072!8.41e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.43e-17,45;UBERON:0003061,1.43e-17,45;UBERON:0002193,1.50e-17,48;UBERON:0002405,1.50e-17,48;UBERON:0004177,6.21e-13,29;UBERON:0005057,6.21e-13,29;UBERON:0002370,7.48e-11,23;UBERON:0000974,7.48e-11,23;UBERON:0004807,7.48e-11,23;UBERON:0005058,7.48e-11,23;UBERON:0003351,7.48e-11,23;UBERON:0009113,7.48e-11,23;UBERON:0003295,7.48e-11,23;UBERON:0009722,7.48e-11,23;UBERON:0005562,7.48e-11,23;UBERON:0007690,7.48e-11,23;UBERON:0000077,1.16e-10,35;UBERON:0003408,1.49e-10,24;UBERON:0006562,6.49e-10,24;UBERON:0001557,6.49e-10,24;UBERON:0001042,6.49e-10,24;UBERON:0008814,6.49e-10,24;UBERON:0009145,6.49e-10,24;UBERON:0003081,3.61e-07,87;UBERON:0000072,7.17e-07,27 | |||
|phase1_expression=5.44506080156299,0,0,0.60492842261366,0.500895729946347,0.16787927191189,0,14.0744422551318,37.16822264804,43.3019373695688,7.19115466547121,6.06268408364557,21.9136934311943,22.9915658361963,20.6528052325711,18.4252493324742,13.9912375625629,26.3410908074128,26.0517423850904,27.1609377150739,7.14363637268986,17.0780436065523,22.9855814442263,3.51983330145495,3.44113921600755,0,0.430761996159075,0,0.190023419456374,0.252030129759931,0.443461021310609,0,1.84519436275371,0,0,0,0,13.811543814318,10.9386948233332,10.9939986234498,18.8234076169925,17.7591826089196,15.0508209439658,0.755380907853464,1.31790010585369,1.28482726513177,0.782391344348039,3.70642765846759,1.97717564461025,2.72201858703997,1.39986421625363,4.31257693094915,26.1740865450069,26.8383992544197,23.19047214083,6.68874533693462,8.30946975822394,3.09403255366465,2.22548106945558,1.05798195854407,2.53532561402472,0.677689064138264,0.889294796111139,6.74924787961049,10.8775299882367,7.104801149461,3.89480143673926,5.76327457982332,1.8664130215526,1.35005938331691,2.10324961351382,5.71301968807607,3.75476519617743,2.20483438586917,1.82106394934649,2.75765635983006,20.9220173898839,22.2175968268227,28.2636021191488,1.45074916503213,1.55528994124096,2.08365348222704,24.2889209131201,15.1945904708554,20.7805616976462,4.71405736757868,3.84403538157578,2.23679334990361,2.04460721999597,2.41828992341714,6.08715426273523,3.44169550792555,0,0,0,0.448026887097336,5.05599912474307,2.04516387093669,0.779358013808606,0,4.78867627240714,2.56652954828636,10.1922095882658,7.11066703153331,0.432982082022428,0,0,4.33898742932428,28.4831672011889,6.08612770165782,3.46970653532272,1.82679286987285,2.53677046981664,2.86373017049983,3.76283862834255,4.02133092254962,3.21353458054686,3.61498392299779,12.3845477272982,8.25010934731787,7.72945314611377,7.75800405016355,0,6.14839673724249,9.84399522023239,1.78819938646014,12.1013275750979,10.1983464268879,10.1656181658452,18.7238299256028,15.0975198930147,2.01046963380583,17.0347833788431,12.2743419518559,18.4931359658008,13.3037835715561,2.64782346010822,8.21086006026614,1.0108910337347,3.15662783829711,1.17108398666433,1.83921683546778,2.16074555766419,1.80845781402858,2.17716797284249,2.69038812598185,2.34254311399322,3.62184719034622,1.29340795759705,2.08016688184601,2.46331573829528,2.6303487891309,1.11218899690239,4.179025998266,2.26360350048738,2.58744546864041,4.21327912387941,4.37491442095016,6.25159698670304,2.07125772535502,1.17263029990548,1.08037236876609,1.18372367792605,3.54175617145327,1.3884040159864,2.79040733700489,1.07309360559848,3.50296027101508,2.63295759861569,2.79084688934462,2.99954595319666,2.77779976108131,2.85415149878366,2.95254121272818,11.7762371195911,1.54356918568927,1.65209391491899,0.528901133327089,2.34617075588757,3.48355007790658,3.8660238396628,3.63030344322017,4.00280478920767,5.32631753115166,2.37264530772256,4.77626968699632,7.54005626400809,4.17808591286417,2.9244613067868,2.69645822596266,3.24207074812041,2.98711909881551,3.98302592001472,3.54170389090159,2.25415471346161,4.88763186828754,4.26695471768777,5.04977903210294,4.99568643281633,2.65698266363284,2.66897837330337,3.82531208157582,2.96452627087149,7.00749444007595,9.82794975566015,11.0182435068578,12.5773275260872,11.576503668116,7.38414970166117,8.34318798607351,8.59316701907687,3.56929837144506,4.31304619582064,5.95425516269605,3.43241440426017,1.26289438973556,2.69096120282868,2.8946611281802,7.02062122633098,3.03186258832776,2.11854469374634,2.54617628662782,1.17345124144251,3.35012514883632,2.38043640886014,3.90267295715598,4.72905432318573,5.97954662051692,6.85655505227195,8.35702905050264,7.25276923836761,6.50920763616802,16.5870412333199,19.5806046174735,2.45882136509518,1.10374698521893,29.3807579677659,30.1234034541962,1.63934945376675,4.79694761688309,0.631016438832513,1.17131623288992,1.07711698866399,0.955875191810208,1.78238939265915,1.69845918473299,1.21443210502468,3.21481443702443,0.395287777946524,12.8528526568723,6.38730383437209,1.42452482933804,5.37526965866801,5.77395430403874,1.32745138339963,1.69946445308487,1.81394134178851,1.88605079755898,3.2483208216885,3.3817866273832,3.10113951801865,3.63533729477506,4.27796854061666,2.52829406348653,1.05418608574999,0,4.08527526904546,1.44048875225048,0.905510786479282,3.42939256050548,2.30542303734956,1.78368817602071,2.96188237083818,1.8267896946876,2.58138878870081,4.2366414172764,1.54369878638473,3.46261131177108,4.35953952078945,2.71408162176701,1.90995750405018,2.46211349617592,3.49777003955821,47.28345201268,20.3336348149445,5.15967169908056,7.40778109478847,15.6345819313894,18.4537207423384,15.328137604837,12.4084253895514,12.4556792568056,14.7873971970733,0.954670618015114,2.37251995185852,5.69294507955176,2.91614420218863,3.3454127362315,3.49380101993884,2.96701562046606,3.80205896336545,3.40282724579238,1.94422459937689,3.72803587852155,0,1.19613236835183,2.31641886639937,1.94451188344048,1.6790777052105,2.70329800785245,3.28600268208111,2.8644964665669,2.20204623293993,1.93267296660805,1.44015003128933,44.5575680085731,5.27085559754427,7.60061083019722,9.48422007737904,19.334883132088,27.2193456050333,29.6882760314323,29.68559496209,32.2082975334591,39.0178850073599,39.6246907587783,38.4958628922022,40.2165498056577,60.0747277213264,1.81384306892169,0,0.62799699626633,0.335769232728157,3.67060228661162,8.63339387075437,6.41030684935428,2.78678892802786,14.0440189129902,14.6835479080437,11.9684561491866,9.16632821503035,9.79563139359019,15.0718154349541,11.3309084608455,12.1504050041725,9.45674526770863,14.9536994964788,12.4262474820437,2.07574695168353,2.79317411380722,3.58540572083682,3.8897074730927,4.61148957781561,4.59608771125035,3.33370091702423,3.5025959730612,4.49286893428541,4.80124702351215,3.29523089857312,4.33840585187975,3.65201879132541,3.9695594491019,3.73330548211486,3.81034953026459,5.2147946675185,5.40145817298374,2.47251540481984,5.7407578852415,4.11443102862498,4.61437096014278,4.5302876089991,5.0871245821315,3.48204707536723,4.39995961036718,3.29270351170991,4.47218509444333,4.20992752922171,3.36685362994643,3.32178050747688,4.53120618927592,6.13846564754534,3.56354734727722,3.47231899766054,2.74791635731741,4.44470056046276,6.01638951335235,4.20834330551455,6.61774257358547,5.10109238364927 | |phase1_expression=5.44506080156299,0,0,0.60492842261366,0.500895729946347,0.16787927191189,0,14.0744422551318,37.16822264804,43.3019373695688,7.19115466547121,6.06268408364557,21.9136934311943,22.9915658361963,20.6528052325711,18.4252493324742,13.9912375625629,26.3410908074128,26.0517423850904,27.1609377150739,7.14363637268986,17.0780436065523,22.9855814442263,3.51983330145495,3.44113921600755,0,0.430761996159075,0,0.190023419456374,0.252030129759931,0.443461021310609,0,1.84519436275371,0,0,0,0,13.811543814318,10.9386948233332,10.9939986234498,18.8234076169925,17.7591826089196,15.0508209439658,0.755380907853464,1.31790010585369,1.28482726513177,0.782391344348039,3.70642765846759,1.97717564461025,2.72201858703997,1.39986421625363,4.31257693094915,26.1740865450069,26.8383992544197,23.19047214083,6.68874533693462,8.30946975822394,3.09403255366465,2.22548106945558,1.05798195854407,2.53532561402472,0.677689064138264,0.889294796111139,6.74924787961049,10.8775299882367,7.104801149461,3.89480143673926,5.76327457982332,1.8664130215526,1.35005938331691,2.10324961351382,5.71301968807607,3.75476519617743,2.20483438586917,1.82106394934649,2.75765635983006,20.9220173898839,22.2175968268227,28.2636021191488,1.45074916503213,1.55528994124096,2.08365348222704,24.2889209131201,15.1945904708554,20.7805616976462,4.71405736757868,3.84403538157578,2.23679334990361,2.04460721999597,2.41828992341714,6.08715426273523,3.44169550792555,0,0,0,0.448026887097336,5.05599912474307,2.04516387093669,0.779358013808606,0,4.78867627240714,2.56652954828636,10.1922095882658,7.11066703153331,0.432982082022428,0,0,4.33898742932428,28.4831672011889,6.08612770165782,3.46970653532272,1.82679286987285,2.53677046981664,2.86373017049983,3.76283862834255,4.02133092254962,3.21353458054686,3.61498392299779,12.3845477272982,8.25010934731787,7.72945314611377,7.75800405016355,0,6.14839673724249,9.84399522023239,1.78819938646014,12.1013275750979,10.1983464268879,10.1656181658452,18.7238299256028,15.0975198930147,2.01046963380583,17.0347833788431,12.2743419518559,18.4931359658008,13.3037835715561,2.64782346010822,8.21086006026614,1.0108910337347,3.15662783829711,1.17108398666433,1.83921683546778,2.16074555766419,1.80845781402858,2.17716797284249,2.69038812598185,2.34254311399322,3.62184719034622,1.29340795759705,2.08016688184601,2.46331573829528,2.6303487891309,1.11218899690239,4.179025998266,2.26360350048738,2.58744546864041,4.21327912387941,4.37491442095016,6.25159698670304,2.07125772535502,1.17263029990548,1.08037236876609,1.18372367792605,3.54175617145327,1.3884040159864,2.79040733700489,1.07309360559848,3.50296027101508,2.63295759861569,2.79084688934462,2.99954595319666,2.77779976108131,2.85415149878366,2.95254121272818,11.7762371195911,1.54356918568927,1.65209391491899,0.528901133327089,2.34617075588757,3.48355007790658,3.8660238396628,3.63030344322017,4.00280478920767,5.32631753115166,2.37264530772256,4.77626968699632,7.54005626400809,4.17808591286417,2.9244613067868,2.69645822596266,3.24207074812041,2.98711909881551,3.98302592001472,3.54170389090159,2.25415471346161,4.88763186828754,4.26695471768777,5.04977903210294,4.99568643281633,2.65698266363284,2.66897837330337,3.82531208157582,2.96452627087149,7.00749444007595,9.82794975566015,11.0182435068578,12.5773275260872,11.576503668116,7.38414970166117,8.34318798607351,8.59316701907687,3.56929837144506,4.31304619582064,5.95425516269605,3.43241440426017,1.26289438973556,2.69096120282868,2.8946611281802,7.02062122633098,3.03186258832776,2.11854469374634,2.54617628662782,1.17345124144251,3.35012514883632,2.38043640886014,3.90267295715598,4.72905432318573,5.97954662051692,6.85655505227195,8.35702905050264,7.25276923836761,6.50920763616802,16.5870412333199,19.5806046174735,2.45882136509518,1.10374698521893,29.3807579677659,30.1234034541962,1.63934945376675,4.79694761688309,0.631016438832513,1.17131623288992,1.07711698866399,0.955875191810208,1.78238939265915,1.69845918473299,1.21443210502468,3.21481443702443,0.395287777946524,12.8528526568723,6.38730383437209,1.42452482933804,5.37526965866801,5.77395430403874,1.32745138339963,1.69946445308487,1.81394134178851,1.88605079755898,3.2483208216885,3.3817866273832,3.10113951801865,3.63533729477506,4.27796854061666,2.52829406348653,1.05418608574999,0,4.08527526904546,1.44048875225048,0.905510786479282,3.42939256050548,2.30542303734956,1.78368817602071,2.96188237083818,1.8267896946876,2.58138878870081,4.2366414172764,1.54369878638473,3.46261131177108,4.35953952078945,2.71408162176701,1.90995750405018,2.46211349617592,3.49777003955821,47.28345201268,20.3336348149445,5.15967169908056,7.40778109478847,15.6345819313894,18.4537207423384,15.328137604837,12.4084253895514,12.4556792568056,14.7873971970733,0.954670618015114,2.37251995185852,5.69294507955176,2.91614420218863,3.3454127362315,3.49380101993884,2.96701562046606,3.80205896336545,3.40282724579238,1.94422459937689,3.72803587852155,0,1.19613236835183,2.31641886639937,1.94451188344048,1.6790777052105,2.70329800785245,3.28600268208111,2.8644964665669,2.20204623293993,1.93267296660805,1.44015003128933,44.5575680085731,5.27085559754427,7.60061083019722,9.48422007737904,19.334883132088,27.2193456050333,29.6882760314323,29.68559496209,32.2082975334591,39.0178850073599,39.6246907587783,38.4958628922022,40.2165498056577,60.0747277213264,1.81384306892169,0,0.62799699626633,0.335769232728157,3.67060228661162,8.63339387075437,6.41030684935428,2.78678892802786,14.0440189129902,14.6835479080437,11.9684561491866,9.16632821503035,9.79563139359019,15.0718154349541,11.3309084608455,12.1504050041725,9.45674526770863,14.9536994964788,12.4262474820437,2.07574695168353,2.79317411380722,3.58540572083682,3.8897074730927,4.61148957781561,4.59608771125035,3.33370091702423,3.5025959730612,4.49286893428541,4.80124702351215,3.29523089857312,4.33840585187975,3.65201879132541,3.9695594491019,3.73330548211486,3.81034953026459,5.2147946675185,5.40145817298374,2.47251540481984,5.7407578852415,4.11443102862498,4.61437096014278,4.5302876089991,5.0871245821315,3.48204707536723,4.39995961036718,3.29270351170991,4.47218509444333,4.20992752922171,3.36685362994643,3.32178050747688,4.53120618927592,6.13846564754534,3.56354734727722,3.47231899766054,2.74791635731741,4.44470056046276,6.01638951335235,4.20834330551455,6.61774257358547,5.10109238364927 | ||
|short_description=p2@Pip4k2a | |short_description=p2@Pip4k2a | ||
}} | }} |
Latest revision as of 08:36, 26 September 2015
Short description: | p2@Pip4k2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pip4k2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2341 |
Association with transcript: | -4bp_to_ENSMUST00000006912_5end |
EntrezGene: | Pip4k2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.22e-08 | 32 |
hematopoietic oligopotent progenitor cell | 4.22e-08 | 32 |
hematopoietic stem cell | 4.22e-08 | 32 |
hematopoietic multipotent progenitor cell | 4.22e-08 | 32 |
hematopoietic lineage restricted progenitor cell | 1.11e-07 | 25 |
lymphoid lineage restricted progenitor cell | 4.93e-07 | 12 |
leukocyte | 5.64e-07 | 17 |
nongranular leukocyte | 5.64e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.43e-17 | 45 |
blood island | 1.43e-17 | 45 |
hemolymphoid system | 1.50e-17 | 48 |
immune system | 1.50e-17 | 48 |
hemopoietic organ | 6.21e-13 | 29 |
immune organ | 6.21e-13 | 29 |
thymus | 7.48e-11 | 23 |
neck | 7.48e-11 | 23 |
respiratory system epithelium | 7.48e-11 | 23 |
hemolymphoid system gland | 7.48e-11 | 23 |
pharyngeal epithelium | 7.48e-11 | 23 |
thymic region | 7.48e-11 | 23 |
pharyngeal gland | 7.48e-11 | 23 |
entire pharyngeal arch endoderm | 7.48e-11 | 23 |
thymus primordium | 7.48e-11 | 23 |
early pharyngeal endoderm | 7.48e-11 | 23 |
mixed endoderm/mesoderm-derived structure | 1.16e-10 | 35 |
gland of gut | 1.49e-10 | 24 |
pharynx | 6.49e-10 | 24 |
upper respiratory tract | 6.49e-10 | 24 |
chordate pharynx | 6.49e-10 | 24 |
pharyngeal arch system | 6.49e-10 | 24 |
pharyngeal region of foregut | 6.49e-10 | 24 |
lateral plate mesoderm | 3.61e-07 | 87 |
segment of respiratory tract | 7.17e-07 | 27 |